RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 MALSU1Q96EH3 234 aa12.96□□□□□ -0.34
CLPTM1-202ENST00000541297 ZNF488Q96MN9 340 aa12.96□□□□□ -0.34
CLPTM1-202ENST00000541297 TMPRSS5Q9H3S3 457 aa12.96□□□□□ -0.34
CLPTM1-202ENST00000541297 KCNJ16Q9NPI9 418 aa12.96□□□□□ -0.34
CLPTM1-202ENST00000541297 MTCH1Q9NZJ7 389 aa12.96□□□□□ -0.34
CLPTM1-202ENST00000541297 CRYM-AS1A6NIL9 109 aa12.95□□□□□ -0.34
CLPTM1-202ENST00000541297 H0YL77 283 aa12.95□□□□□ -0.34
CLPTM1-202ENST00000541297 DIRAS3O95661 229 aa12.95□□□□□ -0.34
CLPTM1-202ENST00000541297 SELEP16581 610 aa12.95□□□□□ -0.34
CLPTM1-202ENST00000541297 OR10AD1Q8NGE0 317 aa12.95□□□□□ -0.34
CLPTM1-202ENST00000541297 FAAP24Q9BTP7 215 aa12.95□□□□□ -0.34
CLPTM1-202ENST00000541297 GGACTQ9BVM4 153 aa12.95□□□□□ -0.34
CLPTM1-202ENST00000541297 SLC35B3Q9H1N7 401 aa12.95□□□□□ -0.34
CLPTM1-202ENST00000541297 IL36RNQ9UBH0 155 aa12.95□□□□□ -0.34
CLPTM1-202ENST00000541297 PKD1L2Q7Z442 2459 aa12.95□□□□□ -0.34
CLPTM1-202ENST00000541297 ZNF205O95201 554 aa12.95□□□□□ -0.34
CLPTM1-202ENST00000541297 CTSDP07339 412 aaPredicted RBP12.95□□□□□ -0.34
CLPTM1-202ENST00000541297 FBP1P09467 338 aa12.95□□□□□ -0.34
CLPTM1-202ENST00000541297 GNG3P63215 75 aa12.95□□□□□ -0.34
CLPTM1-202ENST00000541297 RHEBQ15382 184 aa12.95□□□□□ -0.34
CLPTM1-202ENST00000541297 DYRK2Q92630 601 aa12.95□□□□□ -0.34
CLPTM1-202ENST00000541297 GINS3Q9BRX5 216 aa12.95□□□□□ -0.34
CLPTM1-202ENST00000541297 SERPINE3A8MV23 424 aa12.94□□□□□ -0.34
CLPTM1-202ENST00000541297 E5RGE8 158 aa12.94□□□□□ -0.34
CLPTM1-202ENST00000541297 YIF1AO95070 293 aa12.94□□□□□ -0.34
CLPTM1-202ENST00000541297 HSD17B11Q8NBQ5 300 aa12.94□□□□□ -0.34
CLPTM1-202ENST00000541297 FAM122AQ96E09 287 aa12.94□□□□□ -0.34
CLPTM1-202ENST00000541297 LIME1Q9H400 295 aa12.94□□□□□ -0.34
CLPTM1-202ENST00000541297 PRORYQ9H606 182 aa12.94□□□□□ -0.34
CLPTM1-202ENST00000541297 IL36GQ9NZH8 169 aa12.94□□□□□ -0.34
CLPTM1-202ENST00000541297 NSG2Q9Y328 171 aa12.94□□□□□ -0.34
CLPTM1-202ENST00000541297 BORCS7-ASMTA0A0B4J1R7 106 aa12.94□□□□□ -0.34
CLPTM1-202ENST00000541297 IQCF6A8MYZ5 107 aa12.94□□□□□ -0.34
CLPTM1-202ENST00000541297 RHBDL1O75783 438 aa12.94□□□□□ -0.34
CLPTM1-202ENST00000541297 RBM11P57052 281 aaKnown RBP12.94□□□□□ -0.34
CLPTM1-202ENST00000541297 WDR86Q86TI4 376 aa12.94□□□□□ -0.34
CLPTM1-202ENST00000541297 RND1Q92730 232 aa12.94□□□□□ -0.34
CLPTM1-202ENST00000541297 PUS1Q9Y606 427 aaKnown RBP eCLIP12.94□□□□□ -0.34
CLPTM1-202ENST00000541297 OR5B21A6NL26 309 aa12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 TRAPPC2LH3BP13 241 aa12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 TIMM8AO60220 97 aaPredicted RBP12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 OR7C1O76099 320 aaPredicted RBP12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 PPP1CCP36873 323 aaKnown RBP12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 P2RY1P47900 373 aa12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 PIGPP57054 158 aa12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 VHLLQ6RSH7 139 aa12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 TOMM40LQ969M1 308 aa12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 RARRES2Q99969 163 aa12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 PLCE1Q9P212 2302 aa12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 OR2C1O95371 312 aa12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 IFNA17P01571 189 aa12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 DUSP1P28562 367 aa12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 RPS23P62266 143 aaKnown RBP12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 NHLH2Q02577 135 aa12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 OR2B11Q5JQS5 317 aa12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 LYZL2Q7Z4W2 148 aa12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 ZNF573Q86YE8 665 aa12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 FAM169BQ8N8A8 192 aa12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 RTL8AQ9BWD3 113 aa12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 TOLLIPQ9H0E2 274 aa12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 MSL2Q9HCI7 577 aa12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 ZDHHC8Q9ULC8 765 aa12.93□□□□□ -0.34
CLPTM1-202ENST00000541297 GPR137BO60478 399 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 CRYAAP02489 173 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 LMO1P25800 156 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 GCH1P30793 250 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 ECI1P42126 302 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 RAB2AP61019 212 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 DAZAP2Q15038 168 aaPredicted RBP12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 OR8G1Q15617 311 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 ZNF718Q3SXZ3 478 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 C9orf152Q5JTZ5 239 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 MKXQ8IYA7 352 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 OR51I2Q9H344 312 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 AK3Q9UIJ7 227 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 CHD3Q12873 2000 aaKnown RBP12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 FAM221AA4D161 298 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 C16orf97H3BN30 126 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 MLNRO43193 412 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 GATCO43716 136 aaKnown RBP12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 GRPP07492 148 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 OR5AC1P0C628 307 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 OR5H8P0DN80 308 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 CHATP28329 748 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 RPS10P46783 165 aaKnown RBP12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 ASCL1P50553 236 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 RAB5CP51148 216 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 CLINT1Q14677 625 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 MSMPQ1L6U9 139 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 TMEM182Q6ZP80 229 aaPredicted RBP12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 LRP11Q86VZ4 500 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 YPEL4Q96NS1 127 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 VKORC1Q9BQB6 163 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 PBDC1Q9BVG4 233 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 DUSP13Q9UII6 198 aa12.92□□□□□ -0.34
CLPTM1-202ENST00000541297 ATXN7O15265 892 aaPredicted RBP12.91□□□□□ -0.34
CLPTM1-202ENST00000541297 RNF224P0DH78 156 aa12.91□□□□□ -0.34
CLPTM1-202ENST00000541297 KIAA0141Q14154 515 aaPredicted RBP12.91□□□□□ -0.34
CLPTM1-202ENST00000541297 HEPN1Q6WQI6 88 aa12.91□□□□□ -0.34
CLPTM1-202ENST00000541297 C1QL4Q86Z23 238 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms