RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 RBP7Q96R05 134 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 TRIB3Q96RU7 358 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 GNB1LQ9BYB4 327 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 TMEM216Q9P0N5 145 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 PSMD13Q9UNM6 376 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 OR51B4Q9Y5P0 310 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 SPATA31E1Q6ZUB1 1445 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 ZNF407Q9C0G0 2248 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 DNMT1P26358 1616 aaKnown RBP1.95□□□□□ -2.1
PRKDC-205ENST00000535375 RIMS2Q9UQ26 1411 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 CCRL2O00421 344 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 COCHO43405 550 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 ATP8B1O43520 1251 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 SH2D1AO60880 128 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 ASS1P00966 412 aaKnown RBP1.95□□□□□ -2.1
PRKDC-205ENST00000535375 TPM3P06753 285 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 CD99P14209 185 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 ZNF708P17019 499 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 PRPS1L1P21108 318 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 F8A1P23610 371 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 GADD45AP24522 165 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 S100A2P29034 98 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 MED21Q13503 144 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 COTL1Q14019 142 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 PYCR3Q53H96 274 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 EBLN2Q6P2I7 272 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 DNM1P34Q6PK57 102 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 Q6ZRU5 148 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 TCF23Q7RTU1 214 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 FAM19A5Q7Z5A7 132 aaPredicted RBP1.95□□□□□ -2.1
PRKDC-205ENST00000535375 EIF4E3Q8N5X7 224 aaKnown RBP1.95□□□□□ -2.1
PRKDC-205ENST00000535375 SUN5Q8TC36 379 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 SPPL2BQ8TCT7 592 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 TNFAIP8L1Q8WVP5 186 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 MBOAT7Q96N66 472 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 DCUN1D5Q9BTE7 237 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 ARL6Q9H0F7 186 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 GTSF1LQ9H1H1 148 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 ABCG5Q9H222 651 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 C11orf49Q9H6J7 331 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 PLEKHJ1Q9NW61 149 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 PHLDA3Q9Y5J5 127 aa1.95□□□□□ -2.1
PRKDC-205ENST00000535375 A6NED7 52 aa1.94□□□□□ -2.1
PRKDC-205ENST00000535375 ARGFXA6NJG6 315 aa1.94□□□□□ -2.1
PRKDC-205ENST00000535375 M0QYV0 167 aa1.94□□□□□ -2.1
PRKDC-205ENST00000535375 DENRO43583 198 aaKnown RBP1.94□□□□□ -2.1
PRKDC-205ENST00000535375 HPGDSO60760 199 aa1.94□□□□□ -2.1
PRKDC-205ENST00000535375 GYPCP04921 128 aa1.94□□□□□ -2.1
PRKDC-205ENST00000535375 GUSBP08236 651 aa1.94□□□□□ -2.1
PRKDC-205ENST00000535375 GRPRP30550 384 aa1.94□□□□□ -2.1
PRKDC-205ENST00000535375 AGTR1P30556 359 aa1.94□□□□□ -2.1
PRKDC-205ENST00000535375 COILP38432 576 aaPredicted RBP1.94□□□□□ -2.1
PRKDC-205ENST00000535375 TPM4P67936 248 aa1.94□□□□□ -2.1
PRKDC-205ENST00000535375 OR8G1Q15617 311 aa1.94□□□□□ -2.1
PRKDC-205ENST00000535375 ZNF141Q15928 474 aa1.94□□□□□ -2.1
PRKDC-205ENST00000535375 HLA-DRB5Q30154 266 aa1.94□□□□□ -2.1
PRKDC-205ENST00000535375 TMEM156Q8N614 296 aa1.94□□□□□ -2.1
PRKDC-205ENST00000535375 OR11G2Q8NGC1 345 aa1.94□□□□□ -2.1
PRKDC-205ENST00000535375 CD200R1Q8TD46 325 aa1.94□□□□□ -2.1
PRKDC-205ENST00000535375 PPCDCQ96CD2 204 aa1.94□□□□□ -2.1
PRKDC-205ENST00000535375 POTEKPQ9BYX7 375 aa1.94□□□□□ -2.1
PRKDC-205ENST00000535375 SLC22A4Q9H015 551 aa1.94□□□□□ -2.1
PRKDC-205ENST00000535375 METTL9Q9H1A3 318 aa1.94□□□□□ -2.1
PRKDC-205ENST00000535375 SLC23A2Q9UGH3 650 aa1.94□□□□□ -2.1
PRKDC-205ENST00000535375 LINC00527Q9UJ94 153 aa1.94□□□□□ -2.1
PRKDC-205ENST00000535375 YLPM1P49750 1951 aaKnown RBP1.94□□□□□ -2.1
PRKDC-205ENST00000535375 NUP205Q92621 2012 aa1.93□□□□□ -2.1
PRKDC-205ENST00000535375 TINCRA0A1B0GVN0 87 aa1.93□□□□□ -2.1
PRKDC-205ENST00000535375 GOLGA8KD6RF30 607 aa1.93□□□□□ -2.1
PRKDC-205ENST00000535375 GOLGA8MH3BSY2 632 aa1.93□□□□□ -2.1
PRKDC-205ENST00000535375 CRABP2P29373 138 aa1.93□□□□□ -2.1
PRKDC-205ENST00000535375 PSMB3P49720 205 aa1.93□□□□□ -2.1
PRKDC-205ENST00000535375 C1DQ13901 141 aaKnown RBP1.93□□□□□ -2.1
PRKDC-205ENST00000535375 LGALSLQ3ZCW2 172 aaPredicted RBP1.93□□□□□ -2.1
PRKDC-205ENST00000535375 SPATA31B1PQ5VZV4 182 aa1.93□□□□□ -2.1
PRKDC-205ENST00000535375 FAM151BQ6UXP7 276 aa1.93□□□□□ -2.1
PRKDC-205ENST00000535375 ZFAND2AQ8N6M9 145 aa1.93□□□□□ -2.1
PRKDC-205ENST00000535375 TMEM75Q8N9X5 138 aa1.93□□□□□ -2.1
PRKDC-205ENST00000535375 LY6G5BQ8NDX9 201 aa1.93□□□□□ -2.1
PRKDC-205ENST00000535375 OR51H1Q8NH63 302 aa1.93□□□□□ -2.1
PRKDC-205ENST00000535375 RAD51AP1Q96B01 352 aa1.93□□□□□ -2.1
PRKDC-205ENST00000535375 SMIM19Q96E16 107 aa1.93□□□□□ -2.1
PRKDC-205ENST00000535375 SPANXB1Q9NS25 103 aaPredicted RBP1.93□□□□□ -2.1
PRKDC-205ENST00000535375 A0A0A6YYH2 397 aa1.92□□□□□ -2.1
PRKDC-205ENST00000535375 DAPL1A0PJW8 107 aa1.92□□□□□ -2.1
PRKDC-205ENST00000535375 A6NJ64 397 aa1.92□□□□□ -2.1
PRKDC-205ENST00000535375 METTL15A6NJ78 407 aa1.92□□□□□ -2.1
PRKDC-205ENST00000535375 PCNX2A6NKB5 2137 aa1.92□□□□□ -2.1
PRKDC-205ENST00000535375 BIRC5O15392 142 aa1.92□□□□□ -2.1
PRKDC-205ENST00000535375 ATP6V1G2O95670 118 aa1.92□□□□□ -2.1
PRKDC-205ENST00000535375 ADORA1P30542 326 aa1.92□□□□□ -2.1
PRKDC-205ENST00000535375 CD79BP40259 229 aa1.92□□□□□ -2.1
PRKDC-205ENST00000535375 APOFQ13790 326 aa1.92□□□□□ -2.1
PRKDC-205ENST00000535375 PDGFRLQ15198 375 aa1.92□□□□□ -2.1
PRKDC-205ENST00000535375 KRTAP13-4Q3LI77 160 aa1.92□□□□□ -2.1
PRKDC-205ENST00000535375 TRMT12Q53H54 448 aaKnown RBP1.92□□□□□ -2.1
PRKDC-205ENST00000535375 MESTQ5EB52 335 aa1.92□□□□□ -2.1
PRKDC-205ENST00000535375 DOLPP1Q86YN1 238 aa1.92□□□□□ -2.1
PRKDC-205ENST00000535375 PLCZ1Q86YW0 608 aa1.92□□□□□ -2.1
PRKDC-205ENST00000535375 ZBTB8OSQ8IWT0 167 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms