RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 FOXA1P55317 472 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZNF121P58317 390 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 FGF12P61328 243 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 LRRC63Q05C16 580 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 PAFAH1B3Q15102 231 aaKnown RBP3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 GABRA6Q16445 453 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 TTLL9Q3SXZ7 439 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 C9orf129Q5T035 196 aaKnown RBP3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 FBXW9Q5XUX1 488 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 TMPRSS11AQ6ZMR5 421 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 DGAT2L6Q6ZPD8 337 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 MRPL55Q7Z7F7 128 aaKnown RBP3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 LINC00469Q8N7U9 141 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 WDR31Q8NA23 367 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 CHST4Q8NCG5 386 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 CCL17Q92583 94 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 CPNE4Q96A23 557 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 EXOSC8Q96B26 276 aaKnown RBP3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 CREB3L1Q96BA8 519 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 ATP6V1G3Q96LB4 118 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 NUPR2A6NF83 97 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 TRIM49D1C9J1S8 452 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 H3BN98 237 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 DUX4L4P0CJ87 422 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 MYL9P24844 172 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 MSNP26038 577 aaKnown RBP3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 IVDP26440 423 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 CNTFRP26992 372 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 IL12BP29460 328 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 BTCP35070 178 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 ARR3P36575 388 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 CFHR2P36980 270 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 AP1S2P56377 157 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 UBE2MP61081 183 aaKnown RBP3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 TRIP13Q15645 432 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 LY6EQ16553 131 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 TMEM255AQ5JRV8 349 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 LGALS9CQ6DKI2 356 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 C6orf120Q7Z4R8 191 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 ABHD12BQ7Z5M8 362 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 PDZD9Q8IXQ8 264 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 SYCE1Q8N0S2 351 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 C17orf78Q8N4C9 275 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 SPICQ8N5J4 248 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 NPBQ8NG41 125 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 OR2M3Q8NG83 312 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 OR51D1Q8NGF3 324 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 OR10J6PQ8NGY7 276 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 NEURL3Q96EH8 262 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 FAM210BQ96KR6 192 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 PCBD2Q9H0N5 130 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 KPTNQ9Y664 436 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 CACNG2Q9Y698 323 aa3.27□□□□□ -1.89
HMGB1P23-201ENST00000518743 PKD1P98161 4303 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 KIR2DL5BA0A0G2JN68 375 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 KIR2DL5BA0A0G2JPC4 375 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 A0A0J9YW62 118 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 NPIPB7O75200 414 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 IGLV1-47P01700 117 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 FBP1P09467 338 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 CECR9P0C854 216 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 OR5H8P0DN80 308 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 ZBTB25P24278 435 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 RPL22P35268 128 aaKnown RBP3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 WNT4P56705 351 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 TAS2R60P59551 318 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 UBE2NP61088 152 aaKnown RBP3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 SLAQ13239 276 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 ZNF493Q6ZR52 646 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 PID1Q7Z2X4 250 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 CALHM3Q86XJ0 350 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 PHF13Q86YI8 300 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 KIR2DL5AQ8N109 375 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 CEND1Q8N111 149 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 TCAIMQ8N3R3 496 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 FAM71E2Q8N5Q1 922 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 C11orf42Q8N5U0 333 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 C20orf203Q8NBC4 194 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 DUSP18Q8NEJ0 188 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 OR52E4Q8NGH9 312 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 KIR2DL5BQ8NHK3 375 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 NDNFQ8TB73 568 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 ZNF596Q8TC21 504 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 OR51E1Q8TCB6 317 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 ACTRT1Q8TDG2 376 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 TCP10LQ8TDR4 215 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 ZFP90Q8TF47 636 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 IL22RA2Q969J5 263 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 RPEQ96AT9 228 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 RPUSD4Q96CM3 377 aaKnown RBP3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 ISYNA1Q9NPH2 558 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 PARVAQ9NVD7 372 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 SLC25A37Q9NYZ2 338 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 KLK5Q9Y337 293 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 TSSC4Q9Y5U2 329 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 DNAH6Q9C0G6 4158 aa3.26□□□□□ -1.89
HMGB1P23-201ENST00000518743 IGHV1-69DA0A0B4J2H0 117 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 BTNL10A8MVZ5 291 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 HACD1B0YJ81 288 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 GATCO43716 136 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms