RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 LRRC3CA6NJW4 275 aa12.86□□□□□ -0.35
MACF1-223ENST00000496360 WISP1O95388 367 aa12.86□□□□□ -0.35
MACF1-223ENST00000496360 YPEL5P62699 121 aa12.86□□□□□ -0.35
MACF1-223ENST00000496360 FOXL1Q12952 345 aa12.86□□□□□ -0.35
MACF1-223ENST00000496360 CNN3Q15417 329 aaKnown RBP12.86□□□□□ -0.35
MACF1-223ENST00000496360 TPTE2P1Q5T6R2 138 aa12.86□□□□□ -0.35
MACF1-223ENST00000496360 TOMM20LQ6UXN7 152 aa12.86□□□□□ -0.35
MACF1-223ENST00000496360 KCNE4Q8WWG9 221 aa12.86□□□□□ -0.35
MACF1-223ENST00000496360 ZNF160Q9HCG1 818 aa12.86□□□□□ -0.35
MACF1-223ENST00000496360 HS3ST3A1Q9Y663 406 aa12.86□□□□□ -0.35
MACF1-223ENST00000496360 ALPK2Q86TB3 2170 aa12.86□□□□□ -0.35
MACF1-223ENST00000496360 TRAV9-1A0A075B6T8 112 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 IGKV3D-11A0A0A0MRZ8 115 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 CNOT4O95628 575 aaKnown RBP12.85□□□□□ -0.35
MACF1-223ENST00000496360 FTH1P19P0C7X4 201 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 SELEP16581 610 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 PPP1CBP62140 327 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 OR13H1Q8NG92 308 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 SAP25Q8TEE9 199 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 LHX4Q969G2 390 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 PARLQ9H300 379 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 SLC39A9Q9NUM3 307 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 PIGLQ9Y2B2 252 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 TRBV11-1A0A0K0K1C0 115 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 NKX6-3A6NJ46 265 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 VSTM2BA6NLU5 285 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 H0Y980 276 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 GYPAP02724 150 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 OPN1LWP04000 364 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 CTSBP07858 339 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 S100GP29377 79 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 CHRNB4P30926 498 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 GNRHRP30968 328 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 ALKBH2Q6NS38 261 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 TMEM144Q7Z5S9 345 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 MRPL30Q8TCC3 161 aaKnown RBP12.85□□□□□ -0.35
MACF1-223ENST00000496360 SDSLQ96GA7 329 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 WWTR1Q9GZV5 400 aa12.85□□□□□ -0.35
MACF1-223ENST00000496360 RER1O15258 196 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 PDCD6O75340 191 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 WNT2P09544 360 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 GLI4P10075 376 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 FAHP16930 419 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 YPEL3P61236 119 aaPredicted RBP12.84□□□□□ -0.35
MACF1-223ENST00000496360 MALLQ13021 153 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 Q6ZSR6 202 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 LHFPL2Q6ZUX7 228 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 C17orf78Q8N4C9 275 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 ZNF525Q8N782 197 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 ZNF441Q8N8Z8 693 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 PIGTQ969N2 578 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 LIN37Q96GY3 246 aaPredicted RBP12.84□□□□□ -0.35
MACF1-223ENST00000496360 RASL10BQ96S79 203 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 B3GAT1Q9P2W7 334 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 COPS7AQ9UBW8 275 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 COL5A1P20908 1838 aaPredicted RBP12.84□□□□□ -0.35
MACF1-223ENST00000496360 SPINK2P20155 84 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 IL3RAP26951 378 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 C17orf67Q0P5P2 114 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 HIST3H3Q16695 136 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 GJC3Q8NFK1 279 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 GMPPAQ96IJ6 420 aaPredicted RBP12.84□□□□□ -0.35
MACF1-223ENST00000496360 EMC6Q9BV81 110 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 ELOVL1Q9BW60 279 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 SCNM1Q9BWG6 230 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 GPR27Q9NS67 375 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 SLC45A2Q9UMX9 530 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 WIPI2Q9Y4P8 454 aa12.84□□□□□ -0.35
MACF1-223ENST00000496360 TLX3O43711 291 aaPredicted RBP12.83□□□□□ -0.36
MACF1-223ENST00000496360 LILRA1O75019 489 aa12.83□□□□□ -0.36
MACF1-223ENST00000496360 CTXN2P0C2S0 81 aa12.83□□□□□ -0.36
MACF1-223ENST00000496360 AARDQ4LEZ3 155 aa12.83□□□□□ -0.36
MACF1-223ENST00000496360 SLC22A18ASQ8N1D0 253 aa12.83□□□□□ -0.36
MACF1-223ENST00000496360 RPUSD4Q96CM3 377 aaKnown RBP12.83□□□□□ -0.36
MACF1-223ENST00000496360 NEIL1Q96FI4 390 aaPredicted RBP12.83□□□□□ -0.36
MACF1-223ENST00000496360 RSG1Q9BU20 258 aa12.83□□□□□ -0.36
MACF1-223ENST00000496360 ARID1BQ8NFD5 2236 aaPredicted RBP12.83□□□□□ -0.36
MACF1-223ENST00000496360 CTXND1A0A1B0GTU2 59 aa12.82□□□□□ -0.36
MACF1-223ENST00000496360 MLNRO43193 412 aa12.82□□□□□ -0.36
MACF1-223ENST00000496360 TNFP01375 233 aa12.82□□□□□ -0.36
MACF1-223ENST00000496360 OTX1P32242 354 aaPredicted RBP12.82□□□□□ -0.36
MACF1-223ENST00000496360 GUCA1AP43080 201 aaPredicted RBP12.82□□□□□ -0.36
MACF1-223ENST00000496360 FGF8P55075 233 aaPredicted RBP12.82□□□□□ -0.36
MACF1-223ENST00000496360 PPP1CAP62136 330 aa12.82□□□□□ -0.36
MACF1-223ENST00000496360 OSR2Q8N2R0 312 aa12.82□□□□□ -0.36
MACF1-223ENST00000496360 MRGPRDQ8TDS7 321 aa12.82□□□□□ -0.36
MACF1-223ENST00000496360 SLC37A2Q8TED4 501 aa12.82□□□□□ -0.36
MACF1-223ENST00000496360 EXTL1Q92935 676 aa12.82□□□□□ -0.36
MACF1-223ENST00000496360 TAAR3PQ9P1P4 343 aa12.82□□□□□ -0.36
MACF1-223ENST00000496360 LRP5LA4QPB2 252 aa12.82□□□□□ -0.36
MACF1-223ENST00000496360 FAM90A10PA6NDY2 464 aa12.82□□□□□ -0.36
MACF1-223ENST00000496360 FAM90A18PA6NE21 464 aa12.82□□□□□ -0.36
MACF1-223ENST00000496360 FAM90A16PA6NEW6 464 aa12.82□□□□□ -0.36
MACF1-223ENST00000496360 FAM90A20PA6NIJ5 464 aa12.82□□□□□ -0.36
MACF1-223ENST00000496360 FAM90A8PA6NJQ4 464 aa12.82□□□□□ -0.36
MACF1-223ENST00000496360 FAM90A7PA6NKC0 464 aa12.82□□□□□ -0.36
MACF1-223ENST00000496360 C17orf51A8MQB3 221 aa12.82□□□□□ -0.36
MACF1-223ENST00000496360 FAM90A22PA8MWA6 464 aa12.82□□□□□ -0.36
MACF1-223ENST00000496360 FAM90A12PA8MX19 464 aa12.82□□□□□ -0.36
MACF1-223ENST00000496360 FAM90A5PA8MXJ8 464 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms