RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 SMLR1H3BR10 107 aa8.59□□□□□ -1.03
HDAC3-214ENST00000495485 MPPED1O15442 326 aa8.59□□□□□ -1.03
HDAC3-214ENST00000495485 NDUFA2O43678 99 aa8.59□□□□□ -1.03
HDAC3-214ENST00000495485 PSPNO60542 156 aa8.59□□□□□ -1.03
HDAC3-214ENST00000495485 SIX6O95475 246 aa8.59□□□□□ -1.03
HDAC3-214ENST00000495485 RCC1P18754 421 aaPredicted RBP8.59□□□□□ -1.03
HDAC3-214ENST00000495485 PSMB6P28072 239 aa8.59□□□□□ -1.03
HDAC3-214ENST00000495485 CEACAM6P40199 344 aa8.59□□□□□ -1.03
HDAC3-214ENST00000495485 SNRPD2P62316 118 aaKnown RBP8.59□□□□□ -1.03
HDAC3-214ENST00000495485 SNTB1Q13884 538 aaKnown RBP8.59□□□□□ -1.03
HDAC3-214ENST00000495485 MSMO1Q15800 293 aa8.59□□□□□ -1.03
HDAC3-214ENST00000495485 MSMPQ1L6U9 139 aa8.59□□□□□ -1.03
HDAC3-214ENST00000495485 TMEM30BQ3MIR4 351 aa8.59□□□□□ -1.03
HDAC3-214ENST00000495485 C11orf87Q6NUJ2 197 aa8.59□□□□□ -1.03
HDAC3-214ENST00000495485 TMEM65Q6PI78 240 aa8.59□□□□□ -1.03
HDAC3-214ENST00000495485 ZNF546Q86UE3 836 aa8.59□□□□□ -1.03
HDAC3-214ENST00000495485 C9orf62Q8N4C0 152 aa8.59□□□□□ -1.03
HDAC3-214ENST00000495485 LRTM2Q8N967 370 aa8.59□□□□□ -1.03
HDAC3-214ENST00000495485 INO80EQ8NBZ0 244 aaPredicted RBP8.59□□□□□ -1.03
HDAC3-214ENST00000495485 EDARADDQ8WWZ3 215 aa8.59□□□□□ -1.03
HDAC3-214ENST00000495485 MBD6Q96DN6 1003 aa8.59□□□□□ -1.03
HDAC3-214ENST00000495485 CISD1Q9NZ45 108 aaKnown RBP8.59□□□□□ -1.03
HDAC3-214ENST00000495485 KIF25Q9UIL4 384 aa8.59□□□□□ -1.03
HDAC3-214ENST00000495485 TMED3Q9Y3Q3 217 aa8.59□□□□□ -1.03
HDAC3-214ENST00000495485 CHD3Q12873 2000 aaKnown RBP8.59□□□□□ -1.03
HDAC3-214ENST00000495485 CSMD2Q7Z408 3487 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 K7N7A8 449 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 PHF1O43189 567 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-214ENST00000495485 SIAH2O43255 324 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 ATG12O94817 140 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 OR2F2O95006 317 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 IFNA7P01567 189 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 HEXAP06865 529 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 RPA2P15927 270 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 OR3A1P47881 315 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 SUPT4H1P63272 117 aaKnown RBP8.58□□□□□ -1.04
HDAC3-214ENST00000495485 CCL8P80075 99 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 HTD2P86397 168 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 AESQ08117 197 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 OR2F1Q13607 317 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 TMEM187Q14656 261 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 PHLDA2Q53GA4 152 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 LY6G6FQ5SQ64 297 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 TEX36Q5VZQ5 186 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 LIAT1Q6ZQX7 453 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 ZNF695Q8IW36 515 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 PRR18Q8N4B5 295 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 TCTEX1D1Q8N7M0 179 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 PPP1R1CQ8WVI7 109 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 IL22RA2Q969J5 263 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 SDSLQ96GA7 329 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 SEC22AQ96IW7 307 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 TOLLIPQ9H0E2 274 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 BEX4Q9NWD9 120 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-214ENST00000495485 LPAR3Q9UBY5 353 aa8.58□□□□□ -1.04
HDAC3-214ENST00000495485 PRRC2AP48634 2157 aaKnown RBP8.58□□□□□ -1.04
HDAC3-214ENST00000495485 OTOGQ6ZRI0 2925 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 PPIAL4EA0A075B759 164 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 TRGV10A0A0A0MS01 117 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 E7EQL1 145 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 PPIAL4DF5H284 164 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 LGALS8O00214 317 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 TSC22D2O75157 780 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 HOXB5P09067 269 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 WNT2P09544 360 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 OR5AC1P0C628 307 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 PPIAL4FP0DN26 164 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 PAX1P15863 534 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 RPS2P15880 293 aaKnown RBP8.57□□□□□ -1.04
HDAC3-214ENST00000495485 GNRHRP30968 328 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 S100A11P31949 105 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 CEBPDP49716 269 aaPredicted RBP8.57□□□□□ -1.04
HDAC3-214ENST00000495485 CATR1Q13166 79 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 HERPUD1Q15011 391 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 C2orf68Q2NKX9 166 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 ANKRD55Q3KP44 614 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 LGALSLQ3ZCW2 172 aaPredicted RBP8.57□□□□□ -1.04
HDAC3-214ENST00000495485 DCAF12L2Q5VW00 463 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 TBC1D26Q86UD7 250 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 DTX2Q86UW9 622 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 LRRC75A-AS1Q8N1F1 130 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 CD177Q8N6Q3 437 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 BVESQ8NE79 360 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 ANGPTL6Q8NI99 470 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 ARL11Q969Q4 196 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 RAB39BQ96DA2 213 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 MFFQ9GZY8 342 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 TMEM222Q9H0R3 208 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 RDH8Q9NYR8 311 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 PPIAL4AQ9Y536 164 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 FLNAP21333 2647 aaKnown RBP8.57□□□□□ -1.04
HDAC3-214ENST00000495485 DYSFO75923 2080 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 VPS13CQ709C8 3753 aa8.57□□□□□ -1.04
HDAC3-214ENST00000495485 CELSR1Q9NYQ6 3014 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 IGKV1D-17A0A075B6S4 117 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 IGKV1-6A0A0C4DH72 117 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 KANTRA0A1W2PQU2 76 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 ODAMA1E959 279 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 C3orf80F5H4A9 247 aa8.56□□□□□ -1.04
HDAC3-214ENST00000495485 H0Y980 276 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms