RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 LRRC28Q86X40 367 aaPredicted RBP0.13□□□□□ -2.39
CCDC93-209ENST00000488908 GID4Q8IVV7 300 aa0.13□□□□□ -2.39
CCDC93-209ENST00000488908 ZBTB8OSQ8IWT0 167 aa0.13□□□□□ -2.39
CCDC93-209ENST00000488908 ARHGAP18Q8N392 663 aa0.13□□□□□ -2.39
CCDC93-209ENST00000488908 OR8G5Q8NG78 346 aa0.13□□□□□ -2.39
CCDC93-209ENST00000488908 OR4K17Q8NGC6 315 aa0.13□□□□□ -2.39
CCDC93-209ENST00000488908 FAM131CQ96AQ9 280 aa0.13□□□□□ -2.39
CCDC93-209ENST00000488908 ZNF514Q96K75 400 aaPredicted RBP0.13□□□□□ -2.39
CCDC93-209ENST00000488908 Q96M85 177 aa0.13□□□□□ -2.39
CCDC93-209ENST00000488908 BLZF1Q9H2G9 400 aa0.13□□□□□ -2.39
CCDC93-209ENST00000488908 C16orf95Q9H693 158 aa0.13□□□□□ -2.39
CCDC93-209ENST00000488908 STK38LQ9Y2H1 464 aa0.13□□□□□ -2.39
CCDC93-209ENST00000488908 V9GYY9 64 aa0.13□□□□□ -2.39
CCDC93-209ENST00000488908 KIAA2026Q5HYC2 2103 aa0.13□□□□□ -2.39
CCDC93-209ENST00000488908 MYO5BQ9ULV0 1848 aa0.13□□□□□ -2.39
CCDC93-209ENST00000488908 POLEQ07864 2286 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 NSD2O96028 1365 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 TMSB15BA0A087X1C1 80 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 TVP23AA6NH52 213 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 B4DEV8 164 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 GMDSO60547 372 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 UCHL1P09936 223 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 CTSEP14091 401 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 SPNP16150 400 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 AKR1C4P17516 323 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 PSMA1P25786 263 aaKnown RBP0.12□□□□□ -2.39
CCDC93-209ENST00000488908 ATP6V0CP27449 155 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 PPP1CCP36873 323 aaKnown RBP0.12□□□□□ -2.39
CCDC93-209ENST00000488908 CLDN8P56748 225 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 GABARAPL2P60520 117 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 C1QTNF8P60827 252 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 GBE1Q04446 702 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 PRDX1Q06830 199 aaKnown RBP0.12□□□□□ -2.39
CCDC93-209ENST00000488908 BSPH1Q075Z2 132 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 SLC38A11Q08AI6 406 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 PAFAH1B3Q15102 231 aaKnown RBP0.12□□□□□ -2.39
CCDC93-209ENST00000488908 GUSBP1Q15486 140 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 HSP90AA4PQ58FG1 418 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 FAM162BQ5T6X4 162 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 PIP5KL1Q5T9C9 394 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 EBLN2Q6P2I7 272 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 CLEC2AQ6UVW9 174 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 KRTAP19-3Q7Z4W3 81 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 FAM19A3Q7Z5A8 133 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 LHFPL1Q86WI0 220 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 SPICQ8N5J4 248 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 ACBD4Q8NC06 268 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 OR9I1Q8NGQ6 314 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 OR6K2Q8NGY2 324 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 OR6N2Q8NGY6 317 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 FNDC9Q8TBE3 224 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 CDKL2Q92772 493 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 TBX5Q99593 518 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 BEX2Q9BXY8 128 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 CHST5Q9GZS9 411 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 CHRNA10Q9GZZ6 450 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 OR2AG1Q9H205 316 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 C11orf49Q9H6J7 331 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 NRBP2Q9NSY0 501 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 RHBDD3Q9Y3P4 386 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 FAM215AQ9Y5M1 114 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 KPTNQ9Y664 436 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 FSIP2Q5CZC0 6907 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 MYOFQ9NZM1 2061 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 MYH11P35749 1972 aa0.12□□□□□ -2.39
CCDC93-209ENST00000488908 RFPL4AA6NLU0 287 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 RFPL4AL1F8VTS6 287 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 J3QLI3 93 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 SCN2BO60939 215 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 IGKV5-2P06315 115 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 FGF4P08620 206 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 ESDP10768 282 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 CRHBPP24387 322 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 RPA3P35244 121 aaPredicted RBP0.11□□□□□ -2.39
CCDC93-209ENST00000488908 EVX1P49640 407 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 TSPEAR-AS2P59090 65 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 TMEM258P61165 79 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 XRCC4Q13426 336 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 HES3Q5TGS1 186 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 SLC35E3Q7Z769 313 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 LINC00523Q86TU6 105 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 FGF13Q92913 245 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 ZMYND19Q96E35 227 aaPredicted RBP0.11□□□□□ -2.39
CCDC93-209ENST00000488908 PRSS27Q9BQR3 290 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 MIEN1Q9BRT3 115 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 RGCCQ9H4X1 137 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 C11orf1Q9H5F2 150 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 HAUS4Q9H6D7 363 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 METTL17Q9H7H0 456 aaPredicted RBP0.11□□□□□ -2.39
CCDC93-209ENST00000488908 SNX12Q9UMY4 172 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 SCN9AQ15858 1988 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 NEURL4Q96JN8 1562 aa0.11□□□□□ -2.39
CCDC93-209ENST00000488908 DSCAML1Q8TD84 2053 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 NUMA1Q14980 2115 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 IGHV3-64A0A075B6Q5 118 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 TRGV5A0A0B4J1U4 118 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 A0A1B0GTQ1 180 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 MDFIC2A0A1B0GVS7 189 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 MGAT4DA6NG13 374 aa0.1□□□□□ -2.39
CCDC93-209ENST00000488908 E7EWF7 191 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms