RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 CASP6P55212 293 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 SLC38A11Q08AI6 406 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 TMEM41BQ5BJD5 291 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 SLC35E3Q7Z769 313 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 OR10V1Q8NGI7 309 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 GATAD1Q8WUU5 269 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 HIST1H2BLQ99880 126 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 NUP210LQ5VU65 1888 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 PAX6P26367 422 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 NTF4P34130 210 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 RAC3P60763 192 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 COL10A1Q03692 680 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 OR8G1Q15617 311 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 ZNF506Q5JVG8 444 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 SPINK14Q6IE38 97 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 CRIP3Q6Q6R5 217 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 KMT5CQ86Y97 462 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 IL22RA2Q969J5 263 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 MISP3Q96FF7 219 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 OR51I2Q9H344 312 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 CLN8Q9UBY8 286 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 NBEAQ8NFP9 2946 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 DEFB108AA8MXU0 73 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 NXPH2O95156 264 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 CYB5R3P00387 301 aaPredicted RBP10.89□□□□□ -0.67
VPS52-218ENST00000482399 CD33P20138 364 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 FOXG1P55316 489 aaPredicted RBP10.89□□□□□ -0.67
VPS52-218ENST00000482399 P2RY6Q15077 328 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 FAM78BQ5VT40 261 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 WDR74Q6RFH5 385 aaPredicted RBP10.89□□□□□ -0.67
VPS52-218ENST00000482399 BTNL3Q6UXE8 466 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 TMPRSS7Q7RTY8 843 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 LYPD6BQ8NI32 183 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 NINJ1Q92982 152 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 ZNF552Q9H707 407 aaPredicted RBP10.89□□□□□ -0.67
VPS52-218ENST00000482399 SIRT7Q9NRC8 400 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 LOC102723971A0A1B0GUV8 181 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 LRRC3CA6NJW4 275 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 TCAPO15273 167 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 PAGE4O60829 102 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 CEACAM6P40199 344 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 CXCL12P48061 93 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 KCNMB1Q16558 191 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 OR4X1Q8NH49 305 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 SCRT1Q9BWW7 348 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 FOXI3A8MTJ6 420 aaPredicted RBP10.88□□□□□ -0.67
VPS52-218ENST00000482399 IFNL4K9M1U5 179 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 OPN1MWP04001 364 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 OPN1MW2P0DN77 364 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 OPN1MW3P0DN78 364 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 SRFP11831 508 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 RAB4BP61018 213 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 C10orf128Q5T292 105 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 CPEB3Q8NE35 698 aaKnown RBP10.88□□□□□ -0.67
VPS52-218ENST00000482399 MRPL30Q8TCC3 161 aaKnown RBP10.88□□□□□ -0.67
VPS52-218ENST00000482399 ARV1Q9H2C2 271 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 GPR35Q9HC97 309 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 CBLN4Q9NTU7 201 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 VAX2Q9UIW0 290 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 PITPNC1Q9UKF7 332 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 GTF3C1Q12789 2109 aa10.88□□□□□ -0.67
VPS52-218ENST00000482399 IGHV3-43A0A0B4J1X8 118 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 A0A1W2PPV4 95 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 DVL1O14640 695 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 SYNGR4O95473 234 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 IGHV3-43DP0DP04 118 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 EDDM3BP56851 147 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 FFAR4Q5NUL3 377 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 Q6ZRM9 215 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 TPRX1Q8N7U7 411 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 OR2V1Q8NHB1 315 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 PTPRZ1P23471 2315 aaPredicted RBP10.87□□□□□ -0.67
VPS52-218ENST00000482399 ELOA3CA0A087WX78 387 aaPredicted RBP10.87□□□□□ -0.67
VPS52-218ENST00000482399 hCG_38984A0A1B0GV85 526 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 KIAA1324LA8MWY0 1029 aaPredicted RBP10.87□□□□□ -0.67
VPS52-218ENST00000482399 CA11O75493 328 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 RAC2P15153 192 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 G6PCP35575 357 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 TUSC5Q8IXB3 177 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 DMRTC2Q8IXT2 367 aaPredicted RBP10.87□□□□□ -0.67
VPS52-218ENST00000482399 M1APQ8TC57 530 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 TMEM54Q969K7 222 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 C10orf35Q96D05 121 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 RAB40CQ96S21 281 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 MTCH1Q9NZJ7 389 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 CRIM1Q9NZV1 1036 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 CST2P09228 141 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 FKBP2P26885 142 aaKnown RBP10.87□□□□□ -0.67
VPS52-218ENST00000482399 CEBPDP49716 269 aaPredicted RBP10.87□□□□□ -0.67
VPS52-218ENST00000482399 HIST3H3Q16695 136 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 Q3ZCU0 254 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 LYSMD4Q5XG99 296 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 H1FOOQ8IZA3 346 aaPredicted RBP10.87□□□□□ -0.67
VPS52-218ENST00000482399 IFI44Q8TCB0 444 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 PRDM13Q9H4Q3 707 aa10.87□□□□□ -0.67
VPS52-218ENST00000482399 RHBDL1O75783 438 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 SELLP14151 372 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 GABRA2P47869 451 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 ARL16Q0P5N6 197 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 EDDM3AQ14507 147 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms