RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 ZCCHC23Q6ZST2 131 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 RASSF6Q6ZTQ3 369 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 C3orf62Q6ZUJ4 267 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 SLC51BQ86UW2 128 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 MYPOPQ86VE0 399 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 CBLN2Q8IUK8 224 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 RIMKLAQ8IXN7 391 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 CPNE9Q8IYJ1 553 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 SPICQ8N5J4 248 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 COQ8AQ8NI60 647 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 SYNPRQ8TBG9 265 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 RERGQ96A58 199 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 ANKRD9Q96BM1 317 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 ZNF488Q96MN9 340 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 PRAP1Q96NZ9 151 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 QKIQ96PU8 341 aaKnown RBP eCLIP2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 HDHD3Q9BSH5 251 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 SLC25A2Q9BXI2 301 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 PECRQ9BY49 303 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 BCL2L14Q9BZR8 327 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 MYOZ1Q9NP98 299 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 TAS2R13Q9NYV9 303 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 C14orf166Q9Y224 244 aaKnown RBP2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 CCL26Q9Y258 94 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 TP53TG5Q9Y2B4 290 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 FIS1Q9Y3D6 152 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 TIMM22Q9Y584 194 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 F11RQ9Y624 299 aaKnown RBP2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 TMEM131Q92545 1883 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 LAMA3Q16787 3333 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 EYSQ5T1H1 3165 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 MDC1Q14676 2089 aaKnown RBP2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 CHD9Q3L8U1 2897 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 THADAQ6YHU6 1953 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 TINCRA0A1B0GVN0 87 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 CEACAM18A8MTB9 384 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 C2orf74A8MZ97 194 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 DISC1C4P0D8 188 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 H7C417 338 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 BCL2L11O43521 198 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 SYNGR1O43759 233 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 GABARAPO95166 117 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 CD8AP01732 235 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 BGLAPP02818 100 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 TDGF1P13385 188 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 CD36P16671 472 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 ZNF30P17039 623 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 PYCR1P32322 319 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 CA5AP35218 305 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 CCR2P41597 374 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 P2RX1P51575 399 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 TDGF1P3P51864 188 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 CLDN12P56749 244 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 RAB25P57735 213 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 OR10A3P58181 314 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 UBE2NP61088 152 aaKnown RBP2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 RPS23P62266 143 aaKnown RBP2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 RPL18AQ02543 176 aaKnown RBP2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 SHHQ15465 462 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 HIST3H3Q16695 136 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 CDNFQ49AH0 187 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 TCEAL5Q5H9L2 206 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 C9orf129Q5T035 196 aaKnown RBP2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 AVPI1Q5T686 147 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 HES5Q5TA89 166 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 FBXL22Q6P050 247 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 PLET1Q6UQ28 207 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 CASP12Q6UXS9 341 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 ACP7Q6ZNF0 438 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 S100A7AQ86SG5 101 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 UBAC2Q8NBM4 344 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 OR5AR1Q8NGP9 310 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 OR4S2Q8NH73 311 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 DCAKDQ8WVC6 231 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 ZHX1-C8orf76Q96EF9 292 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 TEAD3Q99594 435 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 DOK1Q99704 481 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 TBL1YQ9BQ87 522 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 FAAP24Q9BTP7 215 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 KIFC1Q9BW19 673 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 SLC19A3Q9BZV2 496 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 PCBD2Q9H0N5 130 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 ARV1Q9H2C2 271 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 LINC00597Q9H2U6 94 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 C12orf4Q9NQ89 552 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 PLSCR3Q9NRY6 295 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 SLC7A10Q9NS82 523 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 RBM22Q9NW64 420 aaKnown RBP eCLIP2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 ZNF226Q9NYT6 803 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 GLTPQ9NZD2 209 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 MTFP1Q9UDX5 166 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 MARCOQ9UEW3 520 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 TBX21Q9UL17 535 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 NEU3Q9UQ49 428 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 EML5Q05BV3 1969 aa2.69□□□□□ -1.98
HMGB1P25-201ENST00000468402 HCFC1P51610 2035 aa2.68□□□□□ -1.98
HMGB1P25-201ENST00000468402 SDK1Q7Z5N4 2213 aa2.68□□□□□ -1.98
HMGB1P25-201ENST00000468402 IGLV1-36A0A0B4J1U3 117 aa2.68□□□□□ -1.98
HMGB1P25-201ENST00000468402 IGHV2OR16-5A0A0B4J2B6 119 aa2.68□□□□□ -1.98
HMGB1P25-201ENST00000468402 METTL15A6NJ78 407 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms