RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	NPIPB11	E5RHQ5	1161 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	BUB1B-PAK6	H3BSN5	160 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	CD3G	P09693	182 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	CGB3	P0DN86	165 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	CGB7	P0DN87	165 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	CD24	P25063	80 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	IL3RA	P26951	378 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	CD34	P28906	385 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	BRS3	P32247	399 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	TGFBR1	P36897	503 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	C2orf68	Q2NKX9	166 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	LDLRAD2	Q5SZI1	272 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	TPTE2P1	Q5T6R2	138 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	FAM53A	Q6NSI3	398 aa	Predicted RBP	10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	NR2C2AP	Q86WQ0	139 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	OR10A7	Q8NGE5	316 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	LGALS14	Q8TCE9	139 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	PIFO	Q8TCI5	191 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	PHF21A	Q96BD5	680 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	RAB3C	Q96E17	227 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	RAB18	Q9NP72	206 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	OR2S2	Q9NQN1	319 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	GFOD1	Q9NXC2	390 aa		10.23	□□□□□ -0.77
FDPS-204	ENST00000461507	C15orf65	H3BRN8	121 aa		10.22	□□□□□ -0.77
FDPS-204	ENST00000461507	CHST1	O43916	411 aa		10.22	□□□□□ -0.77
FDPS-204	ENST00000461507	CD37	P11049	281 aa		10.22	□□□□□ -0.77
FDPS-204	ENST00000461507	REG1B	P48304	166 aa		10.22	□□□□□ -0.77
FDPS-204	ENST00000461507	MADCAM1	Q13477	382 aa		10.22	□□□□□ -0.77
FDPS-204	ENST00000461507	ARFRP1	Q13795	201 aa		10.22	□□□□□ -0.77
FDPS-204	ENST00000461507	HES1	Q14469	280 aa		10.22	□□□□□ -0.77
FDPS-204	ENST00000461507	GNMT	Q14749	295 aa		10.22	□□□□□ -0.77
FDPS-204	ENST00000461507	HERPUD1	Q15011	391 aa		10.22	□□□□□ -0.77
FDPS-204	ENST00000461507	CCDC144NL	Q6NUI1	221 aa		10.22	□□□□□ -0.77
FDPS-204	ENST00000461507	MOB1B	Q7L9L4	216 aa		10.22	□□□□□ -0.77
FDPS-204	ENST00000461507	C5orf24	Q7Z6I8	188 aa		10.22	□□□□□ -0.77
FDPS-204	ENST00000461507	OR52L2P	Q8NGH6	319 aa		10.22	□□□□□ -0.77
FDPS-204	ENST00000461507	OR4C13	Q8NGP0	309 aa		10.22	□□□□□ -0.77
FDPS-204	ENST00000461507	OR10R2	Q8NGX6	335 aa		10.22	□□□□□ -0.77
FDPS-204	ENST00000461507	CFHR4	Q92496	578 aa		10.22	□□□□□ -0.77
FDPS-204	ENST00000461507	GALM	Q96C23	342 aa		10.22	□□□□□ -0.77
FDPS-204	ENST00000461507	YIPF6	Q96EC8	236 aa		10.22	□□□□□ -0.77
FDPS-204	ENST00000461507	C12orf4	Q9NQ89	552 aa		10.22	□□□□□ -0.77
FDPS-204	ENST00000461507	PITPNC1	Q9UKF7	332 aa		10.22	□□□□□ -0.77
FDPS-204	ENST00000461507	TCF19	Q9Y242	345 aa		10.22	□□□□□ -0.77
FDPS-204	ENST00000461507		A0A087X0M5	115 aa		10.21	□□□□□ -0.77
FDPS-204	ENST00000461507		A0A1B0GX30	115 aa		10.21	□□□□□ -0.77
FDPS-204	ENST00000461507	LDLRAD4	O15165	306 aa		10.21	□□□□□ -0.77
FDPS-204	ENST00000461507	HSPA12A	O43301	675 aa		10.21	□□□□□ -0.77
FDPS-204	ENST00000461507	IGLV1-47	P01700	117 aa		10.21	□□□□□ -0.77
FDPS-204	ENST00000461507	GNB3	P16520	340 aa		10.21	□□□□□ -0.77
FDPS-204	ENST00000461507	RAB6A	P20340	208 aa		10.21	□□□□□ -0.77
FDPS-204	ENST00000461507	PPP1CC	P36873	323 aa	Known RBP	10.21	□□□□□ -0.77
FDPS-204	ENST00000461507	TALDO1	P37837	337 aa		10.21	□□□□□ -0.77
FDPS-204	ENST00000461507	SERPINB10	P48595	397 aa		10.21	□□□□□ -0.77
FDPS-204	ENST00000461507	MOGAT2	Q3SYC2	334 aa		10.21	□□□□□ -0.77
FDPS-204	ENST00000461507	MOB3B	Q86TA1	216 aa		10.21	□□□□□ -0.77
FDPS-204	ENST00000461507		Q8N2B8	174 aa		10.21	□□□□□ -0.77
FDPS-204	ENST00000461507	OR52M1	Q8NGK5	317 aa		10.21	□□□□□ -0.77
FDPS-204	ENST00000461507	MRPS26	Q9BYN8	205 aa	Known RBP	10.21	□□□□□ -0.77
FDPS-204	ENST00000461507	NPFFR1	Q9GZQ6	430 aa		10.21	□□□□□ -0.77
FDPS-204	ENST00000461507	RIMS4	Q9H426	269 aa	Predicted RBP	10.21	□□□□□ -0.77
FDPS-204	ENST00000461507	HSF4	Q9ULV5	492 aa		10.21	□□□□□ -0.77
FDPS-204	ENST00000461507	HSD17B6	O14756	317 aa		10.2	□□□□□ -0.78
FDPS-204	ENST00000461507	SLC31A2	O15432	143 aa		10.2	□□□□□ -0.78
FDPS-204	ENST00000461507	PLXNB1	O43157	2135 aa		10.2	□□□□□ -0.78
FDPS-204	ENST00000461507	RGS11	O94810	467 aa		10.2	□□□□□ -0.78
FDPS-204	ENST00000461507	LPL	P06858	475 aa		10.2	□□□□□ -0.78
FDPS-204	ENST00000461507	SMIM18	P0DKX4	95 aa		10.2	□□□□□ -0.78
FDPS-204	ENST00000461507	DYNLT3	P51808	116 aa		10.2	□□□□□ -0.78
FDPS-204	ENST00000461507	HLA-DRB3	P79483	266 aa		10.2	□□□□□ -0.78
FDPS-204	ENST00000461507	TMEM30B	Q3MIR4	351 aa		10.2	□□□□□ -0.78
FDPS-204	ENST00000461507	PLAC9	Q5JTB6	97 aa		10.2	□□□□□ -0.78
FDPS-204	ENST00000461507	SLC16A12	Q6ZSM3	486 aa		10.2	□□□□□ -0.78
FDPS-204	ENST00000461507	LYG1	Q8N1E2	194 aa		10.2	□□□□□ -0.78
FDPS-204	ENST00000461507	FAM89B	Q8N5H3	189 aa		10.2	□□□□□ -0.78
FDPS-204	ENST00000461507	DTX3	Q8N9I9	347 aa		10.2	□□□□□ -0.78
FDPS-204	ENST00000461507	OR56B4	Q8NH76	319 aa		10.2	□□□□□ -0.78
FDPS-204	ENST00000461507	FUNDC2	Q9BWH2	189 aa		10.2	□□□□□ -0.78
FDPS-204	ENST00000461507	LINC00574	Q9H8X3	128 aa		10.2	□□□□□ -0.78
FDPS-204	ENST00000461507	MBNL3	Q9NUK0	354 aa	Known RBP	10.2	□□□□□ -0.78
FDPS-204	ENST00000461507	SLC23A1	Q9UHI7	598 aa		10.2	□□□□□ -0.78
FDPS-204	ENST00000461507	SIGLEC9	Q9Y336	463 aa		10.2	□□□□□ -0.78
FDPS-204	ENST00000461507	IGHV3-72	A0A0B4J1Y9	119 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	OOSP1	A8MZH6	123 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	PEX14	O75381	377 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	CSF1	P09603	554 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	HIST1H1D	P16402	221 aa	Known RBP	10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	RAB7A	P51149	207 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	TMEM50B	P56557	158 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	LOXL3	P58215	753 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	VBP1	P61758	197 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	NCS1	P62166	190 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	DIAPH2-AS1	Q14236	149 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	HMGN3	Q15651	99 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	GPR141	Q7Z602	305 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	IZUMO1	Q8IYV9	350 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	GAPT	Q8N292	157 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	DRAM1	Q8N682	238 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	KLHDC1	Q8N7A1	406 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	OR2AK2	Q8NG84	335 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 54 ms