RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 USB1Q9BQ65 265 aaKnown RBP9.02□□□□□ -0.97
PKP4-206ENST00000452162 DNTTIP1Q9H147 329 aa9.02□□□□□ -0.97
PKP4-206ENST00000452162 NDRG3Q9UGV2 375 aa9.02□□□□□ -0.97
PKP4-206ENST00000452162 AMDHD2Q9Y303 409 aa9.02□□□□□ -0.97
PKP4-206ENST00000452162 TMED3Q9Y3Q3 217 aa9.02□□□□□ -0.97
PKP4-206ENST00000452162 LSM5Q9Y4Y9 91 aaKnown RBP9.02□□□□□ -0.97
PKP4-206ENST00000452162 SLC25A15Q9Y619 301 aa9.02□□□□□ -0.97
PKP4-206ENST00000452162 SESN1Q9Y6P5 492 aa9.02□□□□□ -0.97
PKP4-206ENST00000452162 TMEM56-RWDD3S4R434 201 aa9.02□□□□□ -0.97
PKP4-206ENST00000452162 CSMD1Q96PZ7 3565 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 TAAR5O14804 337 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 THBDP07204 575 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 GRPP07492 148 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 RPL12P30050 165 aaKnown RBP9.01□□□□□ -0.97
PKP4-206ENST00000452162 SPIN3Q5JUX0 258 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 Q6ZR03 302 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 MOB1BQ7L9L4 216 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 C11orf53Q8IXP5 236 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 H1FOOQ8IZA3 346 aaPredicted RBP9.01□□□□□ -0.97
PKP4-206ENST00000452162 BCL2L14Q9BZR8 327 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 TLNRD1Q9H1K6 362 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.01□□□□□ -0.97
PKP4-206ENST00000452162 IGHV3-64DA0A0J9YX35 117 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 A0A1B0GWJ7 208 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 CRYZL1O95825 349 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 SCGB1D2O95969 90 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 MBNL2Q5VZF2 373 aaKnown RBP9.01□□□□□ -0.97
PKP4-206ENST00000452162 TMEM268Q5VZI3 342 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 ALKBH2Q6NS38 261 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 OR52M1Q8NGK5 317 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 OR4D5Q8NGN0 318 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 FAM222BQ8WU58 562 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 CXXC4Q9H2H0 198 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 NARFLQ9H6Q4 476 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 PLEKHA2Q9HB19 425 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 CCL28Q9NRJ3 127 aa9.01□□□□□ -0.97
PKP4-206ENST00000452162 CYSRT1A8MQ03 144 aa9□□□□□ -0.97
PKP4-206ENST00000452162 HSD17B6O14756 317 aa9□□□□□ -0.97
PKP4-206ENST00000452162 SH2D1BO14796 132 aa9□□□□□ -0.97
PKP4-206ENST00000452162 OR10J5Q8NHC4 309 aa9□□□□□ -0.97
PKP4-206ENST00000452162 TMED6Q8WW62 240 aa9□□□□□ -0.97
PKP4-206ENST00000452162 KIRREL1Q96J84 757 aa9□□□□□ -0.97
PKP4-206ENST00000452162 ZFP57Q9NU63 452 aa9□□□□□ -0.97
PKP4-206ENST00000452162 OR2W1Q9Y3N9 320 aa9□□□□□ -0.97
PKP4-206ENST00000452162 PLCE1Q9P212 2302 aa9□□□□□ -0.97
PKP4-206ENST00000452162 NAV2Q8IVL1 2488 aa9□□□□□ -0.97
PKP4-206ENST00000452162 TRAV39A0A0B4J263 110 aa9□□□□□ -0.97
PKP4-206ENST00000452162 KRBOX1C9JBD0 128 aa9□□□□□ -0.97
PKP4-206ENST00000452162 E5RGE8 158 aa9□□□□□ -0.97
PKP4-206ENST00000452162 LGALS8O00214 317 aa9□□□□□ -0.97
PKP4-206ENST00000452162 SIAH2O43255 324 aa9□□□□□ -0.97
PKP4-206ENST00000452162 TIMM8AO60220 97 aaPredicted RBP9□□□□□ -0.97
PKP4-206ENST00000452162 CDS2O95674 445 aa9□□□□□ -0.97
PKP4-206ENST00000452162 UCP1P25874 307 aa9□□□□□ -0.97
PKP4-206ENST00000452162 TLE4Q04727 773 aa9□□□□□ -0.97
PKP4-206ENST00000452162 ZNF718Q3SXZ3 478 aa9□□□□□ -0.97
PKP4-206ENST00000452162 RPL7L1Q6DKI1 246 aaKnown RBP9□□□□□ -0.97
PKP4-206ENST00000452162 LURAP1LQ8IV03 231 aa9□□□□□ -0.97
PKP4-206ENST00000452162 SELENOHQ8IZQ5 122 aaKnown RBP9□□□□□ -0.97
PKP4-206ENST00000452162 MBNL3Q9NUK0 354 aaKnown RBP9□□□□□ -0.97
PKP4-206ENST00000452162 FBXL17Q9UF56 701 aa9□□□□□ -0.97
PKP4-206ENST00000452162 NUP50Q9UKX7 468 aa9□□□□□ -0.97
PKP4-206ENST00000452162 ZDHHC8Q9ULC8 765 aa9□□□□□ -0.97
PKP4-206ENST00000452162 FZR1Q9UM11 496 aa9□□□□□ -0.97
PKP4-206ENST00000452162 NSG2Q9Y328 171 aa9□□□□□ -0.97
PKP4-206ENST00000452162 UBE2J1Q9Y385 318 aaPredicted RBP9□□□□□ -0.97
PKP4-206ENST00000452162 WIPI2Q9Y4P8 454 aa9□□□□□ -0.97
PKP4-206ENST00000452162 DUXBA0A1W2PPF3 345 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 SCO1O75880 301 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 HAND1O96004 215 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 FAM157CP0CG43 387 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 HMGN3Q15651 99 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 ZNF826PQ6ZT77 177 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 WFDC8Q8IUA0 241 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 C1orf174Q8IYL3 243 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 GPHA2Q96T91 129 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 OR2S2Q9NQN1 319 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 OR1A1Q9P1Q5 309 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 A6NNC1 897 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 H0Y980 276 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.99□□□□□ -0.97
PKP4-206ENST00000452162 WNT9BO14905 357 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 PGLYRP1O75594 196 aaPredicted RBP8.99□□□□□ -0.97
PKP4-206ENST00000452162 GAPDHP04406 335 aaKnown RBP8.99□□□□□ -0.97
PKP4-206ENST00000452162 WNT2P09544 360 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 BTF3P20290 206 aaKnown RBP8.99□□□□□ -0.97
PKP4-206ENST00000452162 LMO1P25800 156 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 FABP6P51161 128 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 EIF5AP63241 154 aaKnown RBP8.99□□□□□ -0.97
PKP4-206ENST00000452162 TUSC1Q2TAM9 212 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 CMTM1Q8IZ96 169 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 DMBX1Q8NFW5 382 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 OR5D13Q8NGL4 314 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 OR1S2Q8NGQ3 325 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 C14orf79Q96F83 325 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 C11orf1Q9H5F2 150 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 ZC4H2Q9NQZ6 224 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 POMT1Q9Y6A1 747 aa8.99□□□□□ -0.97
PKP4-206ENST00000452162 DEFB108AA8MXU0 73 aa8.98□□□□□ -0.97
PKP4-206ENST00000452162 ST8SIA3O43173 380 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms