RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 RPS18P62269 152 aaKnown RBP4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 RPS13P62277 151 aaKnown RBP4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 RPL8P62917 257 aaKnown RBP4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 DGCR2P98153 550 aa4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 ZNF345Q14585 488 aa4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 GNMTQ14749 295 aa4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 RAB35Q15286 201 aa4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 CDSNQ15517 529 aa4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 TRMT12Q53H54 448 aaKnown RBP4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 TMEM215Q68D42 235 aa4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 ZNF626Q68DY1 528 aa4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 OPN5Q6U736 354 aa4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 HIST2H3AQ71DI3 136 aa4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 LINC01561Q8N1V8 128 aa4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 KCNRGQ8N5I3 272 aa4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 SLC30A7Q8NEW0 376 aa4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 OR4X1Q8NH49 305 aa4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 GPER1Q99527 375 aa4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 ZNF649Q9BS31 505 aa4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 POLR2J2Q9GZM3 115 aaKnown RBP4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 PRORYQ9H606 182 aa4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 CA10Q9NS85 328 aa4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 STARD5Q9NSY2 213 aa4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 THYN1Q9P016 225 aa4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 PLXNA3P51805 1871 aa4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 MYLKQ15746 1914 aa4.92□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 OR4C46A6NHA9 309 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 ZNF705EA8MWA4 302 aaPredicted RBP4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 F5H5P2 479 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 TSPAN15O95858 294 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 APODP05090 189 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 ADRA2AP08913 450 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 BCKDHAP12694 445 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 EMDP50402 254 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 HILS1P60008 231 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 FMODQ06828 376 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 EFEMP1Q12805 493 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 FAM53BQ14153 422 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 EIF2B1Q14232 305 aaKnown RBP4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 GINS1Q14691 196 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 MEF2DQ14814 521 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 ATP6AP1LQ52LC2 224 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 TECRLQ5HYJ1 363 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 CLLU1OSQ5K130 101 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 AWAT2Q6E213 333 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 FRRS1Q6ZNA5 592 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 MRGPRGQ86SM5 289 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 LINC01551Q86U37 167 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 OR1L8Q8NGR8 309 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 TWIST2Q8WVJ9 160 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 RASL11BQ9BPW5 248 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 HES7Q9BYE0 225 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 CXXC4Q9H2H0 198 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 REEP1Q9H902 201 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 TMEM100Q9NV29 134 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 TAS2R5Q9NYW4 299 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 SLC2A6Q9UGQ3 507 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 ASF1AQ9Y294 204 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 FRMPD3Q5JV73 1810 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 TRDV1A0A1B0GX56 115 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 IDSB3KWA1 339 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 TNFRSF13BO14836 293 aaPredicted RBP4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 WDR1O75083 606 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 IGHA1P01876 353 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 FABP3P05413 133 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 TACSTD2P09758 323 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 SFTA3P0C7M3 94 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 IGFBP3P17936 291 aaPredicted RBP4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 PSMB1P20618 241 aaKnown RBP4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 BRS3P32247 399 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 APLNRP35414 380 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 FOXI1Q12951 378 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 PMVKQ15126 192 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 SRSF7Q16629 238 aaKnown RBP eCLIP4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 MS4A13Q5J8X5 152 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 SUMO4Q6EEV6 95 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 LEG1Q6P5S2 330 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 HEPN1Q6WQI6 88 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 ADAMTSL5Q6ZMM2 481 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 DEFB128Q7Z7B8 93 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 OR4N5Q8IXE1 308 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 C11orf42Q8N5U0 333 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 PRR26Q8N8Z3 221 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 GATD1Q8NB37 220 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 CHST4Q8NCG5 386 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 OR10R2Q8NGX6 335 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 RDH5Q92781 318 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 SLC35G5Q96KT7 338 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 SCGB3A2Q96PL1 93 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 CDX2Q99626 313 aaPredicted RBP4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 FOXC2Q99958 501 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 C20orf144Q9BQM9 153 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 CABLES2Q9BTV7 478 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 NOX3Q9HBY0 568 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 TMEM38BQ9NVV0 291 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 SPANXCQ9NY87 97 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 MSRB1Q9NZV6 116 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 CACFD1Q9UGQ2 172 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 DNAJC15Q9Y5T4 150 aa4.91□□□□□ -1.62
ALMS1-IT1-201ENST00000441587 VWA8A3KMH1 1905 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms