RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 PXMP4Q9Y6I8 212 aa10.9□□□□□ -0.66
FANCA-202ENST00000389301 RND3P61587 244 aa10.9□□□□□ -0.66
FANCA-202ENST00000389301 HYAL1Q12794 435 aa10.9□□□□□ -0.66
FANCA-202ENST00000389301 PMCHL1Q16048 86 aa10.9□□□□□ -0.66
FANCA-202ENST00000389301 TMEM52Q8NDY8 209 aa10.9□□□□□ -0.66
FANCA-202ENST00000389301 SNRNP40Q96DI7 357 aaKnown RBP10.9□□□□□ -0.66
FANCA-202ENST00000389301 UCN2Q96RP3 112 aa10.9□□□□□ -0.66
FANCA-202ENST00000389301 SH3BGRL3Q9H299 93 aa10.9□□□□□ -0.66
FANCA-202ENST00000389301 TREM2Q9NZC2 230 aa10.9□□□□□ -0.66
FANCA-202ENST00000389301 PQLC2LA1A4F0 135 aa10.9□□□□□ -0.67
FANCA-202ENST00000389301 SYNGR1O43759 233 aa10.9□□□□□ -0.67
FANCA-202ENST00000389301 GCM2O75603 506 aaPredicted RBP10.9□□□□□ -0.67
FANCA-202ENST00000389301 CD74P04233 296 aa10.9□□□□□ -0.67
FANCA-202ENST00000389301 GZMHP20718 246 aa10.9□□□□□ -0.67
FANCA-202ENST00000389301 LHX8Q68G74 356 aa10.9□□□□□ -0.67
FANCA-202ENST00000389301 CYB5R2Q6BCY4 276 aa10.9□□□□□ -0.67
FANCA-202ENST00000389301 C12orf54Q6X4T0 127 aa10.9□□□□□ -0.67
FANCA-202ENST00000389301 ZNF600Q6ZNG1 722 aa10.9□□□□□ -0.67
FANCA-202ENST00000389301 LINC00596Q86U02 117 aa10.9□□□□□ -0.67
FANCA-202ENST00000389301 STXBP6Q8NFX7 210 aa10.9□□□□□ -0.67
FANCA-202ENST00000389301 PAXXQ9BUH6 204 aa10.9□□□□□ -0.67
FANCA-202ENST00000389301 IL36RNQ9UBH0 155 aa10.9□□□□□ -0.67
FANCA-202ENST00000389301 SHISA7A6NL88 538 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 TMPRSS2O15393 492 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 IGKV1D-16P01601 117 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 LEMD1Q68G75 181 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 LAIR2Q6ISS4 152 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 FAM216AQ8WUB2 273 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 GPR35Q9HC97 309 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 APELAP0DMC3 54 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 IBA57Q5T440 356 aaKnown RBP10.89□□□□□ -0.67
FANCA-202ENST00000389301 GABRG3Q99928 467 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 ARID1AO14497 2285 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 OR4A8P0C604 315 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 SMAD4Q13485 552 aaKnown RBP10.89□□□□□ -0.67
FANCA-202ENST00000389301 GFRALQ6UXV0 394 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 FAM222BQ8WU58 562 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 HARBI1Q96MB7 349 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 ZNF488Q96MN9 340 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 RPP25Q9BUL9 199 aaKnown RBP10.89□□□□□ -0.67
FANCA-202ENST00000389301 COL25A1Q9BXS0 654 aaPredicted RBP10.89□□□□□ -0.67
FANCA-202ENST00000389301 TMEM222Q9H0R3 208 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 ARRDC1-AS1Q9H2J1 176 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 SAP30LQ9HAJ7 183 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 COA4Q9NYJ1 87 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 METTL1Q9UBP6 276 aaKnown RBP10.89□□□□□ -0.67
FANCA-202ENST00000389301 SF3B6Q9Y3B4 125 aaKnown RBP10.89□□□□□ -0.67
FANCA-202ENST00000389301 M0R3E3 92 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 SNRPCP09234 159 aaKnown RBP10.89□□□□□ -0.67
FANCA-202ENST00000389301 CXorf66Q5JRM2 361 aaPredicted RBP10.89□□□□□ -0.67
FANCA-202ENST00000389301 SPINK14Q6IE38 97 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 RAB37Q96AX2 223 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 WFDC6Q9BQY6 131 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 OR51B2Q9Y5P1 312 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 DSPPQ9NZW4 1301 aa10.89□□□□□ -0.67
FANCA-202ENST00000389301 TRAV17A0A0B4J275 112 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 H0Y980 276 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 DNASE2O00115 360 aaPredicted RBP10.88□□□□□ -0.67
FANCA-202ENST00000389301 AREGP15514 252 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 TMEM92Q6UXU6 159 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 MOGAT3Q86VF5 341 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 AQP3Q92482 292 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 AKIRIN1Q9H9L7 192 aaPredicted RBP10.88□□□□□ -0.67
FANCA-202ENST00000389301 CDC42EP3Q9UKI2 254 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 ITGB4P16144 1822 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 A0A0B4J293 547 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 J3QR06 171 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 PPIHO43447 177 aaKnown RBP10.88□□□□□ -0.67
FANCA-202ENST00000389301 GCSHP23434 173 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 OTX1P32242 354 aaPredicted RBP10.88□□□□□ -0.67
FANCA-202ENST00000389301 C3AR1Q16581 482 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 RHBDD2Q6NTF9 364 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 FAM181AQ8N9Y4 354 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 ZDHHC16Q969W1 377 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 AMELYQ99218 206 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 P2RX4Q99571 388 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 CISD1Q9NZ45 108 aaKnown RBP10.88□□□□□ -0.67
FANCA-202ENST00000389301 KCNE5Q9UJ90 142 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 NUP214P35658 2090 aaPredicted RBP10.88□□□□□ -0.67
FANCA-202ENST00000389301 A0A1W2PRD5 423 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 A0A1W2PRF3 423 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 A0A1W2PRM7 423 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 ASAH2BP0C7U1 165 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 TRA2AQ13595 282 aaKnown RBP eCLIP10.88□□□□□ -0.67
FANCA-202ENST00000389301 CARFQ8N187 725 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 WDR31Q8NA23 367 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 NPDC1Q9NQX5 325 aaPredicted RBP10.88□□□□□ -0.67
FANCA-202ENST00000389301 NHSQ6T4R5 1651 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 ZFC3H1O60293 1989 aaKnown RBP10.88□□□□□ -0.67
FANCA-202ENST00000389301 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.88□□□□□ -0.67
FANCA-202ENST00000389301 IGHV3-21A0A0B4J1V1 117 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 EML2O95834 649 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 SSPNQ14714 243 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 CADM4Q8NFZ8 388 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 RBM14Q96PK6 669 aaKnown RBP10.88□□□□□ -0.67
FANCA-202ENST00000389301 ARAP2Q8WZ64 1704 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 TNFSF14O43557 240 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 CA11O75493 328 aa10.88□□□□□ -0.67
FANCA-202ENST00000389301 PEBP1P30086 187 aaKnown RBP10.88□□□□□ -0.67
FANCA-202ENST00000389301 CEACAM3P40198 252 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms