RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 NCS1P62166 190 aa16.89■□□□□ 0.29
MAP1LC3A-202ENST00000374837 Q3ZCU0 254 aa16.89■□□□□ 0.29
MAP1LC3A-202ENST00000374837 CCBE1Q6UXH8 406 aaPredicted RBP16.89■□□□□ 0.29
MAP1LC3A-202ENST00000374837 MOB1BQ7L9L4 216 aa16.89■□□□□ 0.29
MAP1LC3A-202ENST00000374837 C8orf31Q8N9H6 132 aa16.89■□□□□ 0.29
MAP1LC3A-202ENST00000374837 ZNF439Q8NDP4 499 aa16.89■□□□□ 0.29
MAP1LC3A-202ENST00000374837 OR10X1Q8NGY0 326 aa16.89■□□□□ 0.29
MAP1LC3A-202ENST00000374837 C12orf4Q9NQ89 552 aa16.89■□□□□ 0.29
MAP1LC3A-202ENST00000374837 TCF19Q9Y242 345 aa16.89■□□□□ 0.29
MAP1LC3A-202ENST00000374837 A0A075B6Q4 140 aa16.88■□□□□ 0.29
MAP1LC3A-202ENST00000374837 A6NDX4 124 aa16.88■□□□□ 0.29
MAP1LC3A-202ENST00000374837 OOSP1A8MZH6 123 aa16.88■□□□□ 0.29
MAP1LC3A-202ENST00000374837 MFNGO00587 321 aa16.88■□□□□ 0.29
MAP1LC3A-202ENST00000374837 SLC31A2O15432 143 aa16.88■□□□□ 0.29
MAP1LC3A-202ENST00000374837 HIST1H1DP16402 221 aaKnown RBP16.88■□□□□ 0.29
MAP1LC3A-202ENST00000374837 ZNF134P52741 427 aa16.88■□□□□ 0.29
MAP1LC3A-202ENST00000374837 RAG2P55895 527 aa16.88■□□□□ 0.29
MAP1LC3A-202ENST00000374837 HTD2P86397 168 aa16.88■□□□□ 0.29
MAP1LC3A-202ENST00000374837 MADCAM1Q13477 382 aa16.88■□□□□ 0.29
MAP1LC3A-202ENST00000374837 DIAPH2-AS1Q14236 149 aa16.88■□□□□ 0.29
MAP1LC3A-202ENST00000374837 GNMTQ14749 295 aa16.88■□□□□ 0.29
MAP1LC3A-202ENST00000374837 DHRS7BQ6IAN0 325 aaPredicted RBP16.88■□□□□ 0.29
MAP1LC3A-202ENST00000374837 RPEQ96AT9 228 aa16.88■□□□□ 0.29
MAP1LC3A-202ENST00000374837 GALMQ96C23 342 aa16.88■□□□□ 0.29
MAP1LC3A-202ENST00000374837 OCSTAMPQ9BR26 566 aa16.88■□□□□ 0.29
MAP1LC3A-202ENST00000374837 NAA50Q9GZZ1 169 aaKnown RBP16.88■□□□□ 0.29
MAP1LC3A-202ENST00000374837 Q9N2K0 584 aa16.88■□□□□ 0.29
MAP1LC3A-202ENST00000374837 ABRACLQ9P1F3 81 aa16.88■□□□□ 0.29
MAP1LC3A-202ENST00000374837 POM121CA8CG34 1229 aa16.87■□□□□ 0.29
MAP1LC3A-202ENST00000374837 CD3GP09693 182 aa16.87■□□□□ 0.29
MAP1LC3A-202ENST00000374837 MDKP21741 143 aaPredicted RBP16.87■□□□□ 0.29
MAP1LC3A-202ENST00000374837 SERPINB10P48595 397 aa16.87■□□□□ 0.29
MAP1LC3A-202ENST00000374837 SCAND1P57086 179 aa16.87■□□□□ 0.29
MAP1LC3A-202ENST00000374837 VBP1P61758 197 aa16.87■□□□□ 0.29
MAP1LC3A-202ENST00000374837 MORN2Q502X0 79 aa16.87■□□□□ 0.29
MAP1LC3A-202ENST00000374837 CT45A1Q5HYN5 189 aa16.87■□□□□ 0.29
MAP1LC3A-202ENST00000374837 SLC25A48Q6ZT89 311 aaKnown RBP16.87■□□□□ 0.29
MAP1LC3A-202ENST00000374837 ANKRD13BQ86YJ7 626 aa16.87■□□□□ 0.29
MAP1LC3A-202ENST00000374837 CROCCP3Q8IVE0 287 aa16.87■□□□□ 0.29
MAP1LC3A-202ENST00000374837 CT45A3Q8NHU0 189 aa16.87■□□□□ 0.29
MAP1LC3A-202ENST00000374837 TOMM40LQ969M1 308 aa16.87■□□□□ 0.29
MAP1LC3A-202ENST00000374837 RHBDL2Q9NX52 303 aa16.87■□□□□ 0.29
MAP1LC3A-202ENST00000374837 JPT1Q9UK76 154 aa16.87■□□□□ 0.29
MAP1LC3A-202ENST00000374837 ETV7Q9Y603 341 aa16.87■□□□□ 0.29
MAP1LC3A-202ENST00000374837 CHST1O43916 411 aa16.86■□□□□ 0.29
MAP1LC3A-202ENST00000374837 TMEM127O75204 238 aa16.86■□□□□ 0.29
MAP1LC3A-202ENST00000374837 CD24P25063 80 aa16.86■□□□□ 0.29
MAP1LC3A-202ENST00000374837 BRS3P32247 399 aa16.86■□□□□ 0.29
MAP1LC3A-202ENST00000374837 PPP1CCP36873 323 aaKnown RBP16.86■□□□□ 0.29
MAP1LC3A-202ENST00000374837 CDNFQ49AH0 187 aa16.86■□□□□ 0.29
MAP1LC3A-202ENST00000374837 CCDC144NLQ6NUI1 221 aa16.86■□□□□ 0.29
MAP1LC3A-202ENST00000374837 LIAT1Q6ZQX7 453 aa16.86■□□□□ 0.29
MAP1LC3A-202ENST00000374837 Q6ZSV7 163 aa16.86■□□□□ 0.29
MAP1LC3A-202ENST00000374837 TMEM219Q86XT9 240 aa16.86■□□□□ 0.29
MAP1LC3A-202ENST00000374837 OR4F5Q8NH21 305 aa16.86■□□□□ 0.29
MAP1LC3A-202ENST00000374837 IL1F10Q8WWZ1 152 aa16.86■□□□□ 0.29
MAP1LC3A-202ENST00000374837 MGAT4AQ9UM21 535 aa16.86■□□□□ 0.29
MAP1LC3A-202ENST00000374837 SERPINE3A8MV23 424 aa16.85■□□□□ 0.29
MAP1LC3A-202ENST00000374837 YPEL1O60688 119 aa16.85■□□□□ 0.29
MAP1LC3A-202ENST00000374837 MNDAP41218 407 aa16.85■□□□□ 0.29
MAP1LC3A-202ENST00000374837 ARHGDIBP52566 201 aa16.85■□□□□ 0.29
MAP1LC3A-202ENST00000374837 HLA-DRB3P79483 266 aa16.85■□□□□ 0.29
MAP1LC3A-202ENST00000374837 MRPS15P82914 257 aaKnown RBP16.85■□□□□ 0.29
MAP1LC3A-202ENST00000374837 GPR107Q5VW38 600 aa16.85■□□□□ 0.29
MAP1LC3A-202ENST00000374837 STEAP3Q658P3 488 aa16.85■□□□□ 0.29
MAP1LC3A-202ENST00000374837 GPR141Q7Z602 305 aa16.85■□□□□ 0.29
MAP1LC3A-202ENST00000374837 SLC25A38Q96DW6 304 aa16.85■□□□□ 0.29
MAP1LC3A-202ENST00000374837 YPEL2Q96QA6 119 aa16.85■□□□□ 0.29
MAP1LC3A-202ENST00000374837 BEX1Q9HBH7 125 aa16.85■□□□□ 0.29
MAP1LC3A-202ENST00000374837 RAB18Q9NP72 206 aa16.85■□□□□ 0.29
MAP1LC3A-202ENST00000374837 PITPNC1Q9UKF7 332 aa16.85■□□□□ 0.29
MAP1LC3A-202ENST00000374837 ELF5Q9UKW6 265 aaPredicted RBP16.85■□□□□ 0.29
MAP1LC3A-202ENST00000374837 SPATA2Q9UM82 520 aa16.85■□□□□ 0.29
MAP1LC3A-202ENST00000374837 MMP24Q9Y5R2 645 aa16.85■□□□□ 0.29
MAP1LC3A-202ENST00000374837 TSPAN9O75954 239 aa16.84■□□□□ 0.29
MAP1LC3A-202ENST00000374837 SCGNO76038 276 aa16.84■□□□□ 0.29
MAP1LC3A-202ENST00000374837 GABARAPO95166 117 aa16.84■□□□□ 0.29
MAP1LC3A-202ENST00000374837 SCTP09683 121 aa16.84■□□□□ 0.29
MAP1LC3A-202ENST00000374837 RAB7AP51149 207 aa16.84■□□□□ 0.29
MAP1LC3A-202ENST00000374837 ARFRP1Q13795 201 aa16.84■□□□□ 0.29
MAP1LC3A-202ENST00000374837 ARL6IP1Q15041 203 aa16.84■□□□□ 0.29
MAP1LC3A-202ENST00000374837 CTF1Q16619 201 aa16.84■□□□□ 0.29
MAP1LC3A-202ENST00000374837 LY6G6FQ5SQ64 297 aa16.84■□□□□ 0.29
MAP1LC3A-202ENST00000374837 C3orf56Q8N813 242 aa16.84■□□□□ 0.29
MAP1LC3A-202ENST00000374837 ST6GALNAC6Q969X2 333 aa16.84■□□□□ 0.29
MAP1LC3A-202ENST00000374837 SLC25A46Q96AG3 418 aa16.84■□□□□ 0.29
MAP1LC3A-202ENST00000374837 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.84■□□□□ 0.29
MAP1LC3A-202ENST00000374837 A0A1W2PPI3 338 aa16.83■□□□□ 0.28
MAP1LC3A-202ENST00000374837 TRDCB7Z8K6 153 aa16.83■□□□□ 0.28
MAP1LC3A-202ENST00000374837 HSD17B6O14756 317 aa16.83■□□□□ 0.28
MAP1LC3A-202ENST00000374837 TIMM23O14925 209 aa16.83■□□□□ 0.28
MAP1LC3A-202ENST00000374837 WIPF1O43516 503 aa16.83■□□□□ 0.28
MAP1LC3A-202ENST00000374837 RGS11O94810 467 aa16.83■□□□□ 0.28
MAP1LC3A-202ENST00000374837 GAPDHP04406 335 aaKnown RBP16.83■□□□□ 0.28
MAP1LC3A-202ENST00000374837 FCGR3AP08637 254 aa16.83■□□□□ 0.28
MAP1LC3A-202ENST00000374837 IL3RAP26951 378 aa16.83■□□□□ 0.28
MAP1LC3A-202ENST00000374837 REG1BP48304 166 aa16.83■□□□□ 0.28
MAP1LC3A-202ENST00000374837 ZNF816Q0VGE8 651 aaPredicted RBP16.83■□□□□ 0.28
MAP1LC3A-202ENST00000374837 FBLN7Q53RD9 439 aa16.83■□□□□ 0.28
MAP1LC3A-202ENST00000374837 OR8H3Q8N146 312 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms