RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 CYP2G1PQ6ZSU1 146 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 MMD2Q8IY49 270 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 CLDN23Q96B33 292 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 NUDT11Q96G61 164 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 OR2V2Q96R30 315 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 HIST1H2BLQ99880 126 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 MRPL18Q9H0U6 180 aaKnown RBP5.33□□□□□ -1.56
VPS13B-203ENST00000358544 MYOZ1Q9NP98 299 aaPredicted RBP5.33□□□□□ -1.56
VPS13B-203ENST00000358544 ERRFI1Q9UJM3 462 aaPredicted RBP5.33□□□□□ -1.56
VPS13B-203ENST00000358544 H3BVH4 76 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 SOCS1O15524 211 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 DHRS3O75911 302 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 SPINK9Q5DT21 86 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 OR2M7Q8NG81 312 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 OR1K1Q8NGR3 316 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 APOBEC3DQ96AK3 386 aaPredicted RBP5.33□□□□□ -1.56
VPS13B-203ENST00000358544 OR6C1Q96RD1 312 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 TMEM167BQ9NRX6 74 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 TBL2Q9Y4P3 447 aaKnown RBP5.33□□□□□ -1.56
VPS13B-203ENST00000358544 PIN1P1O15428 100 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 HLA-DRB1P01911 266 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 CDAP32320 146 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 CCR5P51681 352 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 LSM11P83369 360 aaKnown RBP eCLIP5.33□□□□□ -1.56
VPS13B-203ENST00000358544 R3HDM4Q96D70 268 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 COMMD5Q9GZQ3 224 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 VENTXO95231 258 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 CEBPDP49716 269 aaPredicted RBP5.33□□□□□ -1.56
VPS13B-203ENST00000358544 HERVK_113P61574 105 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 FDX2Q6P4F2 183 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 SCGB1D4Q6XE38 83 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 SLC2A8Q9NY64 477 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 ZNF217O75362 1048 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 PRSS1P07477 247 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 WNT5AP41221 380 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 RPS4XP62701 263 aaKnown RBP5.33□□□□□ -1.56
VPS13B-203ENST00000358544 PYY3Q5JQD4 70 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 RNF133Q8WVZ7 376 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 TRPM7Q96QT4 1865 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 GDF15Q99988 308 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 BOKQ9UMX3 212 aaPredicted RBP5.33□□□□□ -1.56
VPS13B-203ENST00000358544 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.33□□□□□ -1.56
VPS13B-203ENST00000358544 DHHO43323 396 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 ENSAO43768 121 aaKnown RBP5.33□□□□□ -1.56
VPS13B-203ENST00000358544 P01737 135 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 COX5BP10606 129 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 SMIM21Q3B7S5 101 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 ATOH7Q8N100 152 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 CHST5Q9GZS9 411 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 CTSSP25774 331 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 ZXDAP98168 799 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 OR10V1Q8NGI7 309 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 PRDM13Q9H4Q3 707 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 DENND4AQ7Z401 1863 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 CRYM-AS1A6NIL9 109 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 LSM6P62312 80 aaKnown RBP5.33□□□□□ -1.56
VPS13B-203ENST00000358544 SMAGPQ0VAQ4 97 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 DEGS2Q6QHC5 323 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 RNF122Q9H9V4 155 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 RGPD3A6NKT7 1758 aaPredicted RBP5.33□□□□□ -1.56
VPS13B-203ENST00000358544 RGPD4Q7Z3J3 1758 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 CYR61O00622 381 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 NDUFB4O95168 129 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 CLDND2Q8NHS1 167 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 POM121L2Q96KW2 1035 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 TMEM56Q96MV1 263 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 CDX2Q99626 313 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-203ENST00000358544 ZBP1Q9H171 429 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 PSG11Q9UQ72 335 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 TRAV9-2A0A087WT02 112 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 SRSF9Q13242 221 aaKnown RBP eCLIP5.32□□□□□ -1.56
VPS13B-203ENST00000358544 TMEM136Q6ZRR5 245 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 DOLPP1Q86YN1 238 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 OR8B12Q8NGG6 310 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 MEGF9Q9H1U4 602 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 TBC1D29Q9UFV1 150 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 FLNBO75369 2602 aaKnown RBP5.32□□□□□ -1.56
VPS13B-203ENST00000358544 A0A1W2PNR3 127 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 PRKNO60260 465 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-203ENST00000358544 FCGR3BO75015 233 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 BHLHE23Q8NDY6 225 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 BAHD1Q8TBE0 780 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-203ENST00000358544 ST6GALNAC6Q969X2 333 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 COL22A1Q8NFW1 1626 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-203ENST00000358544 MSGN1A6NI15 193 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 ZNF205O95201 554 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 ZNF137PP52743 207 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 Q8IYB0 196 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 OR4S2Q8NH73 311 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 PSG5Q15238 335 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 OR2Y1Q8NGV0 311 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 OR10AG1Q8NH19 301 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 THAP10Q9P2Z0 257 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-203ENST00000358544 TMEM131Q92545 1883 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 TFPI2P48307 235 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 RAB37Q96AX2 223 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 FLYWCH2Q96CP2 140 aaKnown RBP5.32□□□□□ -1.56
VPS13B-203ENST00000358544 ANAPC13Q9BS18 74 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 HSPB7Q9UBY9 170 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 GPR132Q9UNW8 380 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms