RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 PRRT1Q99946 306 aa22.22■■□□□ 1.15
SSBP4-202ENST00000348495 GINS4Q9BRT9 223 aa22.22■■□□□ 1.15
SSBP4-202ENST00000348495 JPT1Q9UK76 154 aa22.22■■□□□ 1.15
SSBP4-202ENST00000348495 NFYAP23511 347 aaPredicted RBP22.21■■□□□ 1.15
SSBP4-202ENST00000348495 NRARPQ7Z6K4 114 aa22.21■■□□□ 1.15
SSBP4-202ENST00000348495 OR6F1Q8NGZ6 308 aa22.21■■□□□ 1.15
SSBP4-202ENST00000348495 MRGPRFQ96AM1 343 aa22.21■■□□□ 1.15
SSBP4-202ENST00000348495 YLPM1P49750 1951 aaKnown RBP22.21■■□□□ 1.15
SSBP4-202ENST00000348495 CCR6P51684 374 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 LTC4SQ16873 150 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 RGS21Q2M5E4 152 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 PLA1AQ53H76 456 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 TMEM17Q86X19 198 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 KIR3DL3Q8N743 410 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 TMPRSS13Q9BYE2 586 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 GFOD1Q9NXC2 390 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 SCP2D1Q9UJQ7 156 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 IGHV3-43A0A0B4J1X8 118 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 M0R1W7 72 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 HSPA12AO43301 675 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 PTTG1O95997 202 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 IGHV3-43DP0DP04 118 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 CEACAM6P40199 344 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 UTF1Q5T230 341 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 AADACL3Q5VUY0 350 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 IDO2Q6ZQW0 420 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 Q8N7P7 452 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 OR13C8Q8NGS7 320 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 TERB2Q8NHR7 220 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 ZNF2Q9BSG1 426 aaPredicted RBP22.2■■□□□ 1.14
SSBP4-202ENST00000348495 LPAR2Q9HBW0 351 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 RDH8Q9NYR8 311 aa22.2■■□□□ 1.14
SSBP4-202ENST00000348495 NOTCH2Q04721 2471 aa22.19■■□□□ 1.14
SSBP4-202ENST00000348495 CR1P17927 2039 aa22.19■■□□□ 1.14
SSBP4-202ENST00000348495 YPEL1O60688 119 aa22.19■■□□□ 1.14
SSBP4-202ENST00000348495 IGHV1-8P0DP01 117 aa22.19■■□□□ 1.14
SSBP4-202ENST00000348495 PPP1CCP36873 323 aaKnown RBP22.19■■□□□ 1.14
SSBP4-202ENST00000348495 SCGB2B2Q4G0G5 96 aa22.19■■□□□ 1.14
SSBP4-202ENST00000348495 C1orf122Q6ZSJ8 110 aa22.19■■□□□ 1.14
SSBP4-202ENST00000348495 YPEL2Q96QA6 119 aa22.19■■□□□ 1.14
SSBP4-202ENST00000348495 PARP12Q9H0J9 701 aaKnown RBP22.19■■□□□ 1.14
SSBP4-202ENST00000348495 ONECUT1Q9UBC0 465 aa22.19■■□□□ 1.14
SSBP4-202ENST00000348495 ZNF69Q9UC07 566 aa22.19■■□□□ 1.14
SSBP4-202ENST00000348495 B4DSR2 109 aa22.18■■□□□ 1.14
SSBP4-202ENST00000348495 MSMBP08118 114 aa22.18■■□□□ 1.14
SSBP4-202ENST00000348495 AADACP22760 399 aa22.18■■□□□ 1.14
SSBP4-202ENST00000348495 ARF6P62330 175 aa22.18■■□□□ 1.14
SSBP4-202ENST00000348495 MORN2Q502X0 79 aa22.18■■□□□ 1.14
SSBP4-202ENST00000348495 MAPK1IP1LQ8NDC0 245 aa22.18■■□□□ 1.14
SSBP4-202ENST00000348495 OR10V1Q8NGI7 309 aa22.18■■□□□ 1.14
SSBP4-202ENST00000348495 GNG12Q9UBI6 72 aa22.18■■□□□ 1.14
SSBP4-202ENST00000348495 ITPR3Q14573 2671 aa22.18■■□□□ 1.14
SSBP4-202ENST00000348495 A0A087X0M5 115 aa22.17■■□□□ 1.14
SSBP4-202ENST00000348495 FAM240BA0A1B0GVZ2 78 aa22.17■■□□□ 1.14
SSBP4-202ENST00000348495 A0A1B0GX30 115 aa22.17■■□□□ 1.14
SSBP4-202ENST00000348495 OR5H14A6NHG9 310 aa22.17■■□□□ 1.14
SSBP4-202ENST00000348495 PPYP01298 95 aa22.17■■□□□ 1.14
SSBP4-202ENST00000348495 LY6G6FQ5SQ64 297 aa22.17■■□□□ 1.14
SSBP4-202ENST00000348495 DUSP18Q8NEJ0 188 aa22.17■■□□□ 1.14
SSBP4-202ENST00000348495 MOB3AQ96BX8 217 aa22.17■■□□□ 1.14
SSBP4-202ENST00000348495 OCEL1Q9H607 264 aa22.17■■□□□ 1.14
SSBP4-202ENST00000348495 OR2W1Q9Y3N9 320 aa22.17■■□□□ 1.14
SSBP4-202ENST00000348495 INSIG2Q9Y5U4 225 aa22.17■■□□□ 1.14
SSBP4-202ENST00000348495 KPTNQ9Y664 436 aa22.17■■□□□ 1.14
SSBP4-202ENST00000348495 CREBBPQ92793 2442 aa22.17■■□□□ 1.14
SSBP4-202ENST00000348495 GLCCI1Q86VQ1 547 aa22.17■■□□□ 1.14
SSBP4-202ENST00000348495 DPAGT1Q9H3H5 408 aa22.17■■□□□ 1.14
SSBP4-202ENST00000348495 SESN1Q9Y6P5 492 aa22.17■■□□□ 1.14
SSBP4-202ENST00000348495 hCG_1809904A0A1W2PP81 198 aa22.16■■□□□ 1.14
SSBP4-202ENST00000348495 A0A1W2PPE2 198 aa22.16■■□□□ 1.14
SSBP4-202ENST00000348495 A0A1W2PR64 198 aa22.16■■□□□ 1.14
SSBP4-202ENST00000348495 A0A1W2PRV1 198 aa22.16■■□□□ 1.14
SSBP4-202ENST00000348495 NFYBP25208 207 aa22.16■■□□□ 1.14
SSBP4-202ENST00000348495 LDLRAD3Q86YD5 345 aa22.16■■□□□ 1.14
SSBP4-202ENST00000348495 ENKURQ8TC29 256 aa22.16■■□□□ 1.14
SSBP4-202ENST00000348495 SIRPDQ9H106 197 aa22.16■■□□□ 1.14
SSBP4-202ENST00000348495 NDUFB6O95139 128 aa22.15■■□□□ 1.14
SSBP4-202ENST00000348495 DVL1P1P54792 670 aaPredicted RBP22.15■■□□□ 1.14
SSBP4-202ENST00000348495 OXA1LQ15070 435 aa22.15■■□□□ 1.14
SSBP4-202ENST00000348495 RBMS2Q15434 407 aaKnown RBP22.15■■□□□ 1.14
SSBP4-202ENST00000348495 TMEM249Q2WGJ8 235 aa22.15■■□□□ 1.14
SSBP4-202ENST00000348495 BTNL3Q6UXE8 466 aa22.15■■□□□ 1.14
SSBP4-202ENST00000348495 LINC01356Q8N9X3 169 aa22.15■■□□□ 1.14
SSBP4-202ENST00000348495 SLC25A21Q9BQT8 299 aaPredicted RBP22.15■■□□□ 1.14
SSBP4-202ENST00000348495 FXYD6Q9H0Q3 95 aa22.15■■□□□ 1.14
SSBP4-202ENST00000348495 METTL8Q9H825 291 aaKnown RBP22.15■■□□□ 1.14
SSBP4-202ENST00000348495 UNKLQ9H9P5 680 aaKnown RBP22.15■■□□□ 1.14
SSBP4-202ENST00000348495 IGKV1D-13A0A0B4J2D9 117 aa22.14■■□□□ 1.14
SSBP4-202ENST00000348495 RGS11O94810 467 aa22.14■■□□□ 1.14
SSBP4-202ENST00000348495 IGKV1-13P0DP09 117 aa22.14■■□□□ 1.14
SSBP4-202ENST00000348495 SPNP16150 400 aa22.14■■□□□ 1.14
SSBP4-202ENST00000348495 Q3ZCU0 254 aa22.14■■□□□ 1.14
SSBP4-202ENST00000348495 ZNF439Q8NDP4 499 aa22.14■■□□□ 1.14
SSBP4-202ENST00000348495 COPZ2Q9P299 210 aa22.14■■□□□ 1.14
SSBP4-202ENST00000348495 MMP9P14780 707 aa22.14■■□□□ 1.13
SSBP4-202ENST00000348495 ZNF134P52741 427 aa22.14■■□□□ 1.13
SSBP4-202ENST00000348495 PAX8Q06710 450 aa22.14■■□□□ 1.13
SSBP4-202ENST00000348495 CHPT1Q8WUD6 406 aa22.14■■□□□ 1.13
SSBP4-202ENST00000348495 LEAP2Q969E1 77 aa22.14■■□□□ 1.13
SSBP4-202ENST00000348495 AGMATQ9BSE5 352 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms