RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 MPIG6BO95866 241 aa13.45□□□□□ -0.26
BRCC3-202ENST00000340647 CRHBPP24387 322 aa13.45□□□□□ -0.26
BRCC3-202ENST00000340647 MAPK3P27361 379 aaPredicted RBP13.45□□□□□ -0.26
BRCC3-202ENST00000340647 RPS25P62851 125 aaKnown RBP13.45□□□□□ -0.26
BRCC3-202ENST00000340647 RPS27AP62979 156 aaKnown RBP13.45□□□□□ -0.26
BRCC3-202ENST00000340647 GPR50Q13585 617 aa13.45□□□□□ -0.26
BRCC3-202ENST00000340647 TPBGQ13641 420 aa13.45□□□□□ -0.26
BRCC3-202ENST00000340647 HES1Q14469 280 aa13.45□□□□□ -0.26
BRCC3-202ENST00000340647 MED22Q15528 200 aa13.45□□□□□ -0.26
BRCC3-202ENST00000340647 MORN2Q502X0 79 aa13.45□□□□□ -0.26
BRCC3-202ENST00000340647 OR52L2PQ8NGH6 319 aa13.45□□□□□ -0.26
BRCC3-202ENST00000340647 TMEM203Q969S6 136 aa13.45□□□□□ -0.26
BRCC3-202ENST00000340647 TM2D1Q9BX74 207 aa13.45□□□□□ -0.26
BRCC3-202ENST00000340647 VCXQ9H320 206 aa13.45□□□□□ -0.26
BRCC3-202ENST00000340647 GHRLQ9UBU3 117 aa13.45□□□□□ -0.26
BRCC3-202ENST00000340647 TSSC4Q9Y5U2 329 aaPredicted RBP13.45□□□□□ -0.26
BRCC3-202ENST00000340647 FOXI3A8MTJ6 420 aaPredicted RBP13.44□□□□□ -0.26
BRCC3-202ENST00000340647 CA11O75493 328 aa13.44□□□□□ -0.26
BRCC3-202ENST00000340647 F2RL1P55085 397 aa13.44□□□□□ -0.26
BRCC3-202ENST00000340647 C6orf201Q7Z4U5 140 aa13.44□□□□□ -0.26
BRCC3-202ENST00000340647 PRR18Q8N4B5 295 aa13.44□□□□□ -0.26
BRCC3-202ENST00000340647 THRSPQ92748 146 aa13.44□□□□□ -0.26
BRCC3-202ENST00000340647 PHF21AQ96BD5 680 aa13.44□□□□□ -0.26
BRCC3-202ENST00000340647 RITA1Q96K30 269 aa13.44□□□□□ -0.26
BRCC3-202ENST00000340647 FAAP24Q9BTP7 215 aa13.44□□□□□ -0.26
BRCC3-202ENST00000340647 DNAH9Q9NYC9 4486 aa13.43□□□□□ -0.26
BRCC3-202ENST00000340647 IGLL1P15814 213 aa13.43□□□□□ -0.26
BRCC3-202ENST00000340647 CD1BP29016 333 aa13.43□□□□□ -0.26
BRCC3-202ENST00000340647 MAP2K4P45985 399 aa13.43□□□□□ -0.26
BRCC3-202ENST00000340647 HSD17B12Q53GQ0 312 aa13.43□□□□□ -0.26
BRCC3-202ENST00000340647 RBM48Q5RL73 367 aaKnown RBP13.43□□□□□ -0.26
BRCC3-202ENST00000340647 C6orf183Q5T699 404 aa13.43□□□□□ -0.26
BRCC3-202ENST00000340647 ZNF880Q6PDB4 577 aa13.43□□□□□ -0.26
BRCC3-202ENST00000340647 NBEAL2Q6ZNJ1 2754 aa13.43□□□□□ -0.26
BRCC3-202ENST00000340647 LPAR5Q9H1C0 372 aa13.43□□□□□ -0.26
BRCC3-202ENST00000340647 SCN3BQ9NY72 215 aa13.43□□□□□ -0.26
BRCC3-202ENST00000340647 PSMB11A5LHX3 300 aa13.42□□□□□ -0.26
BRCC3-202ENST00000340647 SPINT2O43291 252 aa13.42□□□□□ -0.26
BRCC3-202ENST00000340647 NAPSAO96009 420 aa13.42□□□□□ -0.26
BRCC3-202ENST00000340647 CPEP16870 476 aa13.42□□□□□ -0.26
BRCC3-202ENST00000340647 HMGN3Q15651 99 aa13.42□□□□□ -0.26
BRCC3-202ENST00000340647 STEAP3Q658P3 488 aa13.42□□□□□ -0.26
BRCC3-202ENST00000340647 GLT8D1Q68CQ7 371 aa13.42□□□□□ -0.26
BRCC3-202ENST00000340647 TGIF2LXQ8IUE1 241 aa13.42□□□□□ -0.26
BRCC3-202ENST00000340647 FAM71E2Q8N5Q1 922 aa13.42□□□□□ -0.26
BRCC3-202ENST00000340647 HSPB9Q9BQS6 159 aa13.42□□□□□ -0.26
BRCC3-202ENST00000340647 CST11Q9H112 138 aa13.42□□□□□ -0.26
BRCC3-202ENST00000340647 ABCG5Q9H222 651 aa13.42□□□□□ -0.26
BRCC3-202ENST00000340647 ISYNA1Q9NPH2 558 aa13.42□□□□□ -0.26
BRCC3-202ENST00000340647 GNG12Q9UBI6 72 aa13.42□□□□□ -0.26
BRCC3-202ENST00000340647 SHISA3A0PJX4 238 aa13.41□□□□□ -0.26
BRCC3-202ENST00000340647 SOCS1O15524 211 aa13.41□□□□□ -0.26
BRCC3-202ENST00000340647 RGS10O43665 173 aa13.41□□□□□ -0.26
BRCC3-202ENST00000340647 UBBP0CG47 229 aa13.41□□□□□ -0.26
BRCC3-202ENST00000340647 PPP1CCP36873 323 aaKnown RBP13.41□□□□□ -0.26
BRCC3-202ENST00000340647 TMEM50BP56557 158 aa13.41□□□□□ -0.26
BRCC3-202ENST00000340647 FABP5Q01469 135 aa13.41□□□□□ -0.26
BRCC3-202ENST00000340647 PLA2G7Q13093 441 aa13.41□□□□□ -0.26
BRCC3-202ENST00000340647 TMEM30BQ3MIR4 351 aa13.41□□□□□ -0.26
BRCC3-202ENST00000340647 NKAPLQ5M9Q1 402 aa13.41□□□□□ -0.26
BRCC3-202ENST00000340647 FOXB2Q5VYV0 432 aa13.41□□□□□ -0.26
BRCC3-202ENST00000340647 ZNF554Q86TJ5 538 aa13.41□□□□□ -0.26
BRCC3-202ENST00000340647 STPG2Q8N412 459 aa13.41□□□□□ -0.26
BRCC3-202ENST00000340647 FAM89BQ8N5H3 189 aa13.41□□□□□ -0.26
BRCC3-202ENST00000340647 LINC00482Q8N8I6 264 aa13.41□□□□□ -0.26
BRCC3-202ENST00000340647 OR4X2Q8NGF9 303 aa13.41□□□□□ -0.26
BRCC3-202ENST00000340647 OR2T10Q8NGZ9 312 aa13.41□□□□□ -0.26
BRCC3-202ENST00000340647 UFD1Q92890 307 aa13.41□□□□□ -0.26
BRCC3-202ENST00000340647 S1PR3Q99500 378 aa13.41□□□□□ -0.26
BRCC3-202ENST00000340647 PARP12Q9H0J9 701 aaKnown RBP13.41□□□□□ -0.26
BRCC3-202ENST00000340647 OR2S2Q9NQN1 319 aa13.41□□□□□ -0.26
BRCC3-202ENST00000340647 AURKAIP1Q9NWT8 199 aaPredicted RBP13.41□□□□□ -0.26
BRCC3-202ENST00000340647 TPRKBQ9Y3C4 175 aa13.41□□□□□ -0.26
BRCC3-202ENST00000340647 AK6Q9Y3D8 172 aaKnown RBP13.41□□□□□ -0.26
BRCC3-202ENST00000340647 LANCL1O43813 399 aa13.4□□□□□ -0.26
BRCC3-202ENST00000340647 GPR12P47775 334 aa13.4□□□□□ -0.26
BRCC3-202ENST00000340647 RPL23AP62750 156 aaKnown RBP13.4□□□□□ -0.26
BRCC3-202ENST00000340647 HTD2P86397 168 aa13.4□□□□□ -0.26
BRCC3-202ENST00000340647 CFHR3Q02985 330 aa13.4□□□□□ -0.26
BRCC3-202ENST00000340647 MLLT11Q13015 90 aaPredicted RBP13.4□□□□□ -0.26
BRCC3-202ENST00000340647 LSAMPQ13449 338 aa13.4□□□□□ -0.26
BRCC3-202ENST00000340647 P2RY14Q15391 338 aa13.4□□□□□ -0.26
BRCC3-202ENST00000340647 SSX1Q16384 188 aa13.4□□□□□ -0.26
BRCC3-202ENST00000340647 LY6G6FQ5SQ64 297 aa13.4□□□□□ -0.26
BRCC3-202ENST00000340647 TRAT1Q6PIZ9 186 aa13.4□□□□□ -0.26
BRCC3-202ENST00000340647 PRSS48Q7RTY5 328 aa13.4□□□□□ -0.26
BRCC3-202ENST00000340647 SLC35E3Q7Z769 313 aa13.4□□□□□ -0.26
BRCC3-202ENST00000340647 SVOPQ8N4V2 548 aa13.4□□□□□ -0.26
BRCC3-202ENST00000340647 ZNF251Q9BRH9 671 aa13.4□□□□□ -0.26
BRCC3-202ENST00000340647 HDHD3Q9BSH5 251 aaPredicted RBP13.4□□□□□ -0.26
BRCC3-202ENST00000340647 TMEM59Q9BXS4 323 aa13.4□□□□□ -0.26
BRCC3-202ENST00000340647 LIN7CQ9NUP9 197 aaKnown RBP13.4□□□□□ -0.26
BRCC3-202ENST00000340647 SERPINE3A8MV23 424 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 SLC17A2O00624 439 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 LDLRAD4O15165 306 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 YPEL1O60688 119 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 BPNT1O95861 308 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 MOSP00540 346 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 HSMCR30P0CW71 290 aa13.39□□□□□ -0.27
BRCC3-202ENST00000340647 PF4V1P10720 104 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms