RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 FAM24AA6NFZ4 105 aa13.8□□□□□ -0.2
SHANK3-201ENST00000262795 HIST1H1DP16402 221 aaKnown RBP13.8□□□□□ -0.2
SHANK3-201ENST00000262795 SSX8Q7RTT4 187 aa13.8□□□□□ -0.2
SHANK3-201ENST00000262795 FAM219AQ8IW50 185 aa13.8□□□□□ -0.2
SHANK3-201ENST00000262795 MOSPD3O75425 235 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 ACAA1P09110 424 aaPredicted RBP13.79□□□□□ -0.2
SHANK3-201ENST00000262795 PNLIPRP3Q17RR3 467 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 SGMS2Q8NHU3 365 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 HGDQ93099 445 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 SIGLEC7Q9Y286 467 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 LIMS3P0CW19 117 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 LIMS4P0CW20 117 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 VDAC2P45880 294 aaPredicted RBP13.79□□□□□ -0.2
SHANK3-201ENST00000262795 PCSK4Q6UW60 755 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 SCGB1D4Q6XE38 83 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 SSBP3Q9BWW4 388 aaPredicted RBP13.79□□□□□ -0.2
SHANK3-201ENST00000262795 SLC45A2Q9UMX9 530 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 TCRBV4S1A1TA0A5B7 111 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 ZNF383Q8NA42 475 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 ADTRPQ96IZ2 230 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 GPX7Q96SL4 187 aaPredicted RBP13.79□□□□□ -0.2
SHANK3-201ENST00000262795 SLC6A13Q9NSD5 602 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 BCL2L11O43521 198 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 IGHV3-48P01763 117 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 BSPH1Q075Z2 132 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 MIDNQ504T8 468 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 ZNF519Q8TB69 540 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 OR4C46A6NHA9 309 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 SNRPGP15A8MWD9 76 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 CD37P11049 281 aa13.79□□□□□ -0.2
SHANK3-201ENST00000262795 WNT9BO14905 357 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 SRSF7Q16629 238 aaKnown RBP eCLIP13.78□□□□□ -0.23e-8■■■□□ 18
SHANK3-201ENST00000262795 LIMS2Q7Z4I7 341 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 NUDT16L1Q9BRJ7 211 aaKnown RBP13.78□□□□□ -0.2
SHANK3-201ENST00000262795 PJVKQ0ZLH3 352 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 PRSS8Q16651 343 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 LSMEM1Q8N8F7 131 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 OR5C1Q8NGR4 320 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 MYO16Q9Y6X6 1858 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 UQCRFS1P47985 274 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 FAM78BQ5VT40 261 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 XAF1Q6GPH4 301 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 OR4A47Q6IF82 309 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 SP7Q8TDD2 431 aaPredicted RBP13.78□□□□□ -0.2
SHANK3-201ENST00000262795 RSG1Q9BU20 258 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 MMP24Q9Y5R2 645 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 CACNA1GO43497 2377 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 ZG16O60844 167 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 RPS4Y2Q8TD47 263 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 GABARAPL3Q9BY60 117 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 ZNF324O75467 553 aaPredicted RBP13.78□□□□□ -0.2
SHANK3-201ENST00000262795 TRGV3P03979 118 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 CLPPQ16740 277 aaPredicted RBP13.78□□□□□ -0.2
SHANK3-201ENST00000262795 TMEM52Q8NDY8 209 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 LPAR3Q9UBY5 353 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 CXorf51AA0A1B0GTR3 108 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 TMEM129A0AVI4 362 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 DYNLT3P51808 116 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 SUCLG1P53597 346 aaKnown RBP13.78□□□□□ -0.2
SHANK3-201ENST00000262795 ZNF429Q86V71 674 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 SIGLEC12Q96PQ1 595 aa13.78□□□□□ -0.2
SHANK3-201ENST00000262795 ABCA3Q99758 1704 aa13.77□□□□□ -0.2
SHANK3-201ENST00000262795 SYNGR1O43759 233 aa13.77□□□□□ -0.2
SHANK3-201ENST00000262795 ISOC2Q96AB3 205 aa13.77□□□□□ -0.2
SHANK3-201ENST00000262795 STARD10Q9Y365 291 aa13.77□□□□□ -0.2
SHANK3-201ENST00000262795 TIAF1O95411 115 aa13.77□□□□□ -0.2
SHANK3-201ENST00000262795 PCP4P48539 62 aa13.77□□□□□ -0.2
SHANK3-201ENST00000262795 ZAR1Q86SH2 424 aa13.77□□□□□ -0.2
SHANK3-201ENST00000262795 RGP1Q92546 391 aaPredicted RBP13.77□□□□□ -0.2
SHANK3-201ENST00000262795 NEU1Q99519 415 aa13.77□□□□□ -0.2
SHANK3-201ENST00000262795 NAT8BQ9UHF3 227 aa13.77□□□□□ -0.2
SHANK3-201ENST00000262795 HIGD1AQ9Y241 93 aa13.77□□□□□ -0.2
SHANK3-201ENST00000262795 PSMB11A5LHX3 300 aa13.77□□□□□ -0.21
SHANK3-201ENST00000262795 J3QR06 171 aa13.77□□□□□ -0.21
SHANK3-201ENST00000262795 FCGR2BP31994 310 aaPredicted RBP13.77□□□□□ -0.21
SHANK3-201ENST00000262795 ABHD12Q8N2K0 398 aa13.77□□□□□ -0.21
SHANK3-201ENST00000262795 MBD3L1Q8WWY6 194 aa13.77□□□□□ -0.21
SHANK3-201ENST00000262795 A0A1W2PQM1 296 aa13.77□□□□□ -0.21
SHANK3-201ENST00000262795 M0R143 59 aa13.77□□□□□ -0.21
SHANK3-201ENST00000262795 CBLN2Q8IUK8 224 aa13.77□□□□□ -0.21
SHANK3-201ENST00000262795 WNT2BQ93097 391 aa13.77□□□□□ -0.21
SHANK3-201ENST00000262795 SNRNP40Q96DI7 357 aaKnown RBP13.77□□□□□ -0.21
SHANK3-201ENST00000262795 TP53RKQ96S44 253 aa13.77□□□□□ -0.21
SHANK3-201ENST00000262795 RNF122Q9H9V4 155 aa13.77□□□□□ -0.21
SHANK3-201ENST00000262795 TMEM210A6NLX4 147 aa13.77□□□□□ -0.21
SHANK3-201ENST00000262795 MESTQ5EB52 335 aa13.77□□□□□ -0.21
SHANK3-201ENST00000262795 TTC32Q5I0X7 151 aa13.77□□□□□ -0.21
SHANK3-201ENST00000262795 MIA3Q5JRA6 1907 aa13.77□□□□□ -0.21
SHANK3-201ENST00000262795 A0A1W2PS18 150 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 CA10Q9NS85 328 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 ZNF275Q9NSD4 429 aaPredicted RBP13.76□□□□□ -0.21
SHANK3-201ENST00000262795 GZMHP20718 246 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 GAPTQ8N292 157 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 OR10G4Q8NGN3 311 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 OR10G9Q8NGN4 311 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 OR10G7Q8NGN6 311 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 MRGPRFQ96AM1 343 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 SLIRPQ9GZT3 109 aaKnown RBP13.76□□□□□ -0.21
SHANK3-201ENST00000262795 CCL28Q9NRJ3 127 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 IGHV3-11P01762 117 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms