RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 ID3Q02535 119 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 NHLH2Q02577 135 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 MSMPQ1L6U9 139 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 CXorf66Q5JRM2 361 aaPredicted RBP10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 KRBOX4Q5JUW0 171 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 LRP11Q86VZ4 500 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 OR10Z1Q8NGY1 313 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 OR1L1Q8NH94 360 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 COQ2Q96H96 371 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 KIAA2026Q5HYC2 2103 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 ZFHX4Q86UP3 3567 aa10.86□□□□□ -0.67
SPTLC1-201ENST00000262554 A0A1B0GU03 582 aa10.86□□□□□ -0.67
SPTLC1-201ENST00000262554 A8MXE2 369 aa10.86□□□□□ -0.67
SPTLC1-201ENST00000262554 WRBO00258 174 aa10.86□□□□□ -0.67
SPTLC1-201ENST00000262554 APOC3P02656 99 aa10.86□□□□□ -0.67
SPTLC1-201ENST00000262554 BMP5P22003 454 aa10.86□□□□□ -0.67
SPTLC1-201ENST00000262554 NKX6-1P78426 367 aaPredicted RBP10.86□□□□□ -0.67
SPTLC1-201ENST00000262554 HOXA4Q00056 320 aaPredicted RBP10.86□□□□□ -0.67
SPTLC1-201ENST00000262554 MST1LQ2TV78 715 aa10.86□□□□□ -0.67
SPTLC1-201ENST00000262554 PXDC1Q5TGL8 231 aa10.86□□□□□ -0.67
SPTLC1-201ENST00000262554 FAM90A1Q86YD7 464 aa10.86□□□□□ -0.67
SPTLC1-201ENST00000262554 SPACA3Q8IXA5 215 aa10.86□□□□□ -0.67
SPTLC1-201ENST00000262554 NINJ1Q92982 152 aa10.86□□□□□ -0.67
SPTLC1-201ENST00000262554 GINS3Q9BRX5 216 aa10.86□□□□□ -0.67
SPTLC1-201ENST00000262554 PARP12Q9H0J9 701 aaKnown RBP10.86□□□□□ -0.67
SPTLC1-201ENST00000262554 MAGT1Q9H0U3 335 aa10.86□□□□□ -0.67
SPTLC1-201ENST00000262554 HRH4Q9H3N8 390 aa10.86□□□□□ -0.67
SPTLC1-201ENST00000262554 WFDC1Q9HC57 220 aa10.86□□□□□ -0.67
SPTLC1-201ENST00000262554 FAM212BQ9NTI7 297 aaPredicted RBP10.86□□□□□ -0.67
SPTLC1-201ENST00000262554 LYRM2Q9NU23 88 aaPredicted RBP10.86□□□□□ -0.67
SPTLC1-201ENST00000262554 CFAP47Q6ZTR5 3102 aa10.86□□□□□ -0.67
SPTLC1-201ENST00000262554 CEP250Q9BV73 2442 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 FAM24AA6NFZ4 105 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 HBZP02008 142 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 SEC11BP0C7V7 166 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 ZNF16P17020 682 aaPredicted RBP10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 EPHA1P21709 976 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 CFHR2P36980 270 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 LPAR6P43657 344 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 TDGF1P3P51864 188 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 SELENOVP59797 346 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 FAM27E3Q08E93 113 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 PJVKQ0ZLH3 352 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 SWI5Q1ZZU3 235 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 FAM209AQ5JX71 171 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 VHLLQ6RSH7 139 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 MRGPRGQ86SM5 289 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 DRAM1Q8N682 238 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 CD177Q8N6Q3 437 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 ZBTB34Q8NCN2 500 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 LSM10Q969L4 123 aaKnown RBP10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 GPR146Q96CH1 333 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 LURAP1Q96LR2 239 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 PARP11Q9NR21 331 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 AKAP13Q12802 2813 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 GVINP1Q7Z2Y8 2422 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 IGSF23A1L1A6 192 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 SRRM5B3KS81 715 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 ATP6V1G2-DDX39BF2Z307 99 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 TFF1P04155 84 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 PRDX2P32119 198 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 TRAT1Q6PIZ9 186 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 DOLPP1Q86YN1 238 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 CISD2Q8N5K1 135 aaKnown RBP10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 ZNF645Q8N7E2 425 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 MRGPRDQ8TDS7 321 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 TMEM171Q8WVE6 324 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 OR2V2Q96R30 315 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 SCNM1Q9BWG6 230 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 COL25A1Q9BXS0 654 aaPredicted RBP10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 TOLLIPQ9H0E2 274 aa10.85□□□□□ -0.67
SPTLC1-201ENST00000262554 IGLV3-9A0A075B6K5 115 aa10.84□□□□□ -0.67
SPTLC1-201ENST00000262554 A0A0G2JRQ6 117 aa10.84□□□□□ -0.67
SPTLC1-201ENST00000262554 CHST1O43916 411 aa10.84□□□□□ -0.67
SPTLC1-201ENST00000262554 PITX3O75364 302 aa10.84□□□□□ -0.67
SPTLC1-201ENST00000262554 SPP1P10451 314 aa10.84□□□□□ -0.67
SPTLC1-201ENST00000262554 GLIPR1P48060 266 aa10.84□□□□□ -0.67
SPTLC1-201ENST00000262554 AKR1C2P52895 323 aa10.84□□□□□ -0.67
SPTLC1-201ENST00000262554 PAX5Q02548 391 aa10.84□□□□□ -0.67
SPTLC1-201ENST00000262554 ZNF266Q14584 549 aa10.84□□□□□ -0.67
SPTLC1-201ENST00000262554 TBR1Q16650 682 aa10.84□□□□□ -0.67
SPTLC1-201ENST00000262554 TMEM252Q8N6L7 170 aa10.84□□□□□ -0.67
SPTLC1-201ENST00000262554 OR52L2PQ8NGH6 319 aa10.84□□□□□ -0.67
SPTLC1-201ENST00000262554 MEGF10Q96KG7 1140 aa10.84□□□□□ -0.67
SPTLC1-201ENST00000262554 SEBOXQ9HB31 216 aaPredicted RBP10.84□□□□□ -0.67
SPTLC1-201ENST00000262554 COQ3Q9NZJ6 369 aa10.84□□□□□ -0.67
SPTLC1-201ENST00000262554 ASPMQ8IZT6 3477 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 A0A0G2JNJ9 132 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 TMEM218A2RU14 115 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 NXPH3O95157 252 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 IGKV1-39P01597 117 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 IGKV1D-39P04432 117 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 EGR1P18146 543 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 F2RL1P55085 397 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 AKR1C1Q04828 323 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 BAXQ07812 192 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 GFRALQ6UXV0 394 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 Q6ZRG5 221 aa10.83□□□□□ -0.68
SPTLC1-201ENST00000262554 Q8NA96 180 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms