RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 CYB5R3P00387 301 aaPredicted RBP16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 SNAI3Q3KNW1 292 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 OPN4Q9UHM6 478 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 SHANK3Q9BYB0 1731 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 IGHV3OR16-10A0A075B7F0 116 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 ZIC3O60481 467 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 ZNF426Q9BUY5 554 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 IGKV3D-15A0A087WSY6 115 aa16.21■□□□□ 0.19
SMARCC1-201ENST00000254480 LOC389332A0A1B0GUA5 103 aa16.21■□□□□ 0.19
SMARCC1-201ENST00000254480 IGKV3-15P01624 115 aa16.21■□□□□ 0.19
SMARCC1-201ENST00000254480 ASCL5Q7RTU5 278 aa16.21■□□□□ 0.19
SMARCC1-201ENST00000254480 PILRAQ9UKJ1 303 aa16.21■□□□□ 0.19
SMARCC1-201ENST00000254480 KCNK7Q9Y2U2 307 aa16.21■□□□□ 0.19
SMARCC1-201ENST00000254480 FCGR3AP08637 254 aa16.21■□□□□ 0.19
SMARCC1-201ENST00000254480 OR2T10Q8NGZ9 312 aa16.21■□□□□ 0.19
SMARCC1-201ENST00000254480 SPTBP11277 2137 aa16.21■□□□□ 0.19
SMARCC1-201ENST00000254480 C9orf172C9J069 976 aa16.21■□□□□ 0.19
SMARCC1-201ENST00000254480 FAM214BQ7L5A3 538 aa16.21■□□□□ 0.19
SMARCC1-201ENST00000254480 C10orf35Q96D05 121 aa16.21■□□□□ 0.19
SMARCC1-201ENST00000254480 STARD4Q96DR4 205 aa16.21■□□□□ 0.19
SMARCC1-201ENST00000254480 CCKARP32238 428 aa16.21■□□□□ 0.19
SMARCC1-201ENST00000254480 MMP16P51512 607 aa16.21■□□□□ 0.19
SMARCC1-201ENST00000254480 LOXL3P58215 753 aa16.21■□□□□ 0.19
SMARCC1-201ENST00000254480 PRNDQ9UKY0 176 aa16.21■□□□□ 0.19
SMARCC1-201ENST00000254480 FUT9Q9Y231 359 aa16.21■□□□□ 0.18
SMARCC1-201ENST00000254480 TSPAN2O60636 221 aa16.2■□□□□ 0.18
SMARCC1-201ENST00000254480 CRISP2P16562 243 aa16.2■□□□□ 0.18
SMARCC1-201ENST00000254480 HIST3H3Q16695 136 aa16.2■□□□□ 0.18
SMARCC1-201ENST00000254480 GUCD1Q96NT3 240 aa16.2■□□□□ 0.18
SMARCC1-201ENST00000254480 FAM186AA6NE01 2351 aa16.2■□□□□ 0.18
SMARCC1-201ENST00000254480 IGHV3OR16-12A0A075B7B8 117 aa16.2■□□□□ 0.18
SMARCC1-201ENST00000254480 HBZP02008 142 aa16.2■□□□□ 0.18
SMARCC1-201ENST00000254480 ZNF250P15622 560 aa16.2■□□□□ 0.18
SMARCC1-201ENST00000254480 IER3P46695 156 aa16.2■□□□□ 0.18
SMARCC1-201ENST00000254480 C16orf82Q7Z2V1 217 aa16.2■□□□□ 0.18
SMARCC1-201ENST00000254480 EIF4EBP2Q13542 120 aaPredicted RBP16.2■□□□□ 0.18
SMARCC1-201ENST00000254480 POM121Q96HA1 1249 aa16.2■□□□□ 0.18
SMARCC1-201ENST00000254480 MANBALQ9NQG1 85 aa16.2■□□□□ 0.18
SMARCC1-201ENST00000254480 IL17BQ9UHF5 180 aa16.2■□□□□ 0.18
SMARCC1-201ENST00000254480 ELF5Q9UKW6 265 aaPredicted RBP16.2■□□□□ 0.18
SMARCC1-201ENST00000254480 CD82P27701 267 aa16.2■□□□□ 0.18
SMARCC1-201ENST00000254480 IRF3Q14653 427 aa16.2■□□□□ 0.18
SMARCC1-201ENST00000254480 RTN4RQ9BZR6 473 aa16.2■□□□□ 0.18
SMARCC1-201ENST00000254480 TMEM210A6NLX4 147 aa16.2■□□□□ 0.18
SMARCC1-201ENST00000254480 SLC35E3Q7Z769 313 aa16.2■□□□□ 0.18
SMARCC1-201ENST00000254480 ZNF714Q96N38 554 aa16.2■□□□□ 0.18
SMARCC1-201ENST00000254480 HELTA6NFD8 242 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 HAX1O00165 279 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 SLC25A53Q5H9E4 307 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 ZNF841Q6ZN19 808 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 OR1L8Q8NGR8 309 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 MRPL37Q9BZE1 423 aaKnown RBP16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 NGFRP08138 427 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 MELTFP08582 738 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 PGA4P0DJD7 388 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 SURF2Q15527 256 aaPredicted RBP16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 C9orf62Q8N4C0 152 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 AP5S1Q9NUS5 200 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 CISD1Q9NZ45 108 aaKnown RBP16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 OR2T8A6NH00 312 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 OR2H2O95918 312 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 ANKRD55Q3KP44 614 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 OR8A1Q8NGG7 326 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 A0A1W2PPC1 479 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 TIAF1O95411 115 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 OR1L1Q8NH94 360 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 OIT3Q8WWZ8 545 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 HS3ST3B1Q9Y662 390 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 FCARP24071 287 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 FAM27BQ5VT28 67 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 DCAF12L2Q5VW00 463 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 TEPPQ6URK8 271 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 Q9N2K0 584 aa16.19■□□□□ 0.18
SMARCC1-201ENST00000254480 B4E171 279 aa16.18■□□□□ 0.18
SMARCC1-201ENST00000254480 WISP3O95389 354 aaPredicted RBP16.18■□□□□ 0.18
SMARCC1-201ENST00000254480 TSPAN7P41732 249 aa16.18■□□□□ 0.18
SMARCC1-201ENST00000254480 PERPQ96FX8 193 aa16.18■□□□□ 0.18
SMARCC1-201ENST00000254480 K7N7A8 449 aa16.18■□□□□ 0.18
SMARCC1-201ENST00000254480 DXOO77932 396 aaKnown RBP16.18■□□□□ 0.18
SMARCC1-201ENST00000254480 ATP6V0CP27449 155 aa16.18■□□□□ 0.18
SMARCC1-201ENST00000254480 KCNMB1Q16558 191 aa16.18■□□□□ 0.18
SMARCC1-201ENST00000254480 OR10C1Q96KK4 312 aa16.18■□□□□ 0.18
SMARCC1-201ENST00000254480 LY6EQ16553 131 aa16.18■□□□□ 0.18
SMARCC1-201ENST00000254480 HOGA1Q86XE5 327 aa16.18■□□□□ 0.18
SMARCC1-201ENST00000254480 PHYHIPLQ96FC7 376 aa16.18■□□□□ 0.18
SMARCC1-201ENST00000254480 UBR3Q6ZT12 1888 aa16.18■□□□□ 0.18
SMARCC1-201ENST00000254480 LEUTXA8MZ59 168 aa16.18■□□□□ 0.18
SMARCC1-201ENST00000254480 MBPP02686 304 aaPredicted RBP16.18■□□□□ 0.18
SMARCC1-201ENST00000254480 SAP25Q8TEE9 199 aa16.18■□□□□ 0.18
SMARCC1-201ENST00000254480 RSG1Q9BU20 258 aa16.18■□□□□ 0.18
SMARCC1-201ENST00000254480 RGPD4Q7Z3J3 1758 aa16.17■□□□□ 0.18
SMARCC1-201ENST00000254480 HLA-DRB5Q30154 266 aa16.17■□□□□ 0.18
SMARCC1-201ENST00000254480 CEACAM21Q3KPI0 293 aa16.17■□□□□ 0.18
SMARCC1-201ENST00000254480 VAX2Q9UIW0 290 aa16.17■□□□□ 0.18
SMARCC1-201ENST00000254480 PILRBQ9UKJ0 227 aa16.17■□□□□ 0.18
SMARCC1-201ENST00000254480 A0A1W2PQM1 296 aa16.17■□□□□ 0.18
SMARCC1-201ENST00000254480 MMP9P14780 707 aa16.17■□□□□ 0.18
SMARCC1-201ENST00000254480 DHRS11Q6UWP2 260 aa16.17■□□□□ 0.18
SMARCC1-201ENST00000254480 SRXN1Q9BYN0 137 aa16.17■□□□□ 0.18
SMARCC1-201ENST00000254480 TDRD15B5MCY1 1934 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms