RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ZDHHC23Q8IYP9 409 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 SEMA6DQ8NFY4 1073 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 OR1M1Q8NGA1 313 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 OR10R2Q8NGX6 335 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 CLDND2Q8NHS1 167 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 STOML3Q8TAV4 291 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 NANPQ8TBE9 248 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 NPRL2Q8WTW4 380 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 RNF141Q8WVD5 230 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 CCL17Q92583 94 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 MARC2Q969Z3 335 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 FGGYQ96C11 551 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 SAT2Q96F10 170 aaPredicted RBP4.38□□□□□ -1.71
SHMT1-211ENST00000618902 NKX3-1Q99801 234 aaPredicted RBP4.38□□□□□ -1.71
SHMT1-211ENST00000618902 PDCD10Q9BUL8 212 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 PAPOLGQ9BWT3 736 aaKnown RBP4.38□□□□□ -1.71
SHMT1-211ENST00000618902 CHIAQ9BZP6 476 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 CST11Q9H112 138 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 TLNRD1Q9H1K6 362 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 OR51I2Q9H344 312 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 NARFLQ9H6Q4 476 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 FN3KRPQ9HA64 309 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 RASL12Q9NYN1 266 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 MBD2Q9UBB5 411 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 ANAPC10Q9UM13 185 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 PCDHB10Q9UN67 800 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 TNFSF18Q9UNG2 199 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 WIPI2Q9Y4P8 454 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 PKD1L1Q8TDX9 2849 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 IGHV3OR15-7A0A075B7D8 119 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 FXYD6-FXYD2A0A087WZ82 144 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 TRAV38-1A0A0B4J264 116 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 TEX13DA0A0J9YY54 714 aaPredicted RBP4.37□□□□□ -1.71
SHMT1-211ENST00000618902 PQLC2LA1A4F0 135 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 C9orf170A2RU37 121 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 DBX1A6NMT0 343 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 TMEM14DPA8MWL7 114 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 ZNF732B4DXR9 585 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 F5H0A9 414 aaPredicted RBP4.37□□□□□ -1.71
SHMT1-211ENST00000618902 F8VVB4 439 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 F8VWA3 439 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 GOSR2O14653 212 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 CDIPTO14735 213 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 BCL2L11O43521 198 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 SYNGR1O43759 233 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 RHBDL1O75783 438 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 CFDP00746 253 aaPredicted RBP4.37□□□□□ -1.71
SHMT1-211ENST00000618902 NRASP01111 189 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 LHBP01229 141 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 RLN2P04090 185 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 GRPP07492 148 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 ACAA1P09110 424 aaPredicted RBP4.37□□□□□ -1.71
SHMT1-211ENST00000618902 ZNF735P0CB33 412 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 VSIG10L2P0DP72 767 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 LYL1P12980 280 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 TPT1P13693 172 aaKnown RBP4.37□□□□□ -1.71
SHMT1-211ENST00000618902 PRKACBP22694 351 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 ZBTB25P24278 435 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 FPR2P25090 351 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 ZNF93P35789 620 aaPredicted RBP4.37□□□□□ -1.71
SHMT1-211ENST00000618902 GPM6AP51674 278 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 RPL15P61313 204 aaKnown RBP4.37□□□□□ -1.71
SHMT1-211ENST00000618902 BLOC1S1P78537 153 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 DHRS2Q13268 280 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 HMGN3Q15651 99 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 CEACAM21Q3KPI0 293 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 CDNFQ49AH0 187 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 FAM120AOSQ5T036 256 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 ATPAF1Q5TC12 328 aaPredicted RBP4.37□□□□□ -1.71
SHMT1-211ENST00000618902 PLCXD3Q63HM9 321 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 ZNF660Q6AZW8 331 aaPredicted RBP4.37□□□□□ -1.71
SHMT1-211ENST00000618902 DUX4L9Q6RFH8 374 aaPredicted RBP4.37□□□□□ -1.71
SHMT1-211ENST00000618902 LYPD2Q6UXB3 125 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 BTNL3Q6UXE8 466 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 WDR82Q6UXN9 313 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 IL34Q6ZMJ4 242 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 C1orf122Q6ZSJ8 110 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 UTS2BQ765I0 119 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 HOGA1Q86XE5 327 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 ANGPTL5Q86XS5 388 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 FAM90A1Q86YD7 464 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 CALHM1Q8IU99 346 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 SPAG16Q8N0X2 631 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 BATF2Q8N1L9 274 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 SVBPQ8N300 66 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 FGFRL1Q8N441 504 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 FAM89BQ8N5H3 189 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 JAGN1Q8N5M9 183 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 COMMD1Q8N668 190 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 GCSAMQ8N6F7 178 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 DTX3Q8N9I9 347 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 SCCPDHQ8NBX0 429 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 OR51A2Q8NGJ7 313 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 OR10Z1Q8NGY1 313 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 ZNF418Q8TF45 676 aaPredicted RBP4.37□□□□□ -1.71
SHMT1-211ENST00000618902 PP6455Q8WZ26 134 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 ST8SIA2Q92186 375 aa4.37□□□□□ -1.71
SHMT1-211ENST00000618902 EMG1Q92979 244 aaKnown RBP4.37□□□□□ -1.71
SHMT1-211ENST00000618902 MRPS24Q96EL2 167 aaKnown RBP4.37□□□□□ -1.71
SHMT1-211ENST00000618902 ZNF488Q96MN9 340 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms