RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 SLC25A47Q6Q0C1 308 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 MDS2Q8NDY4 140 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 LFNGQ8NES3 379 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 OR2AJ1Q8NGZ0 328 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 MIEN1Q9BRT3 115 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 B4GALT7Q9UBV7 327 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 GPR132Q9UNW8 380 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 WSB1Q9Y6I7 421 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 NCOA6Q14686 2063 aaPredicted RBP13.74□□□□□ -0.21
RTN1-209ENST00000611068 SPTBN4Q9H254 2564 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 CLDN34H7C241 214 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 DEDDO75618 318 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 CD46P15529 392 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 FKBP2P26885 142 aaKnown RBP13.74□□□□□ -0.21
RTN1-209ENST00000611068 KLF3P57682 345 aaPredicted RBP13.74□□□□□ -0.21
RTN1-209ENST00000611068 VAMP2P63027 116 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 HLA-DRB3P79483 266 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 ZNF66Q6ZN08 573 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 FNDC9Q8TBE3 224 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 KCNE4Q8WWG9 221 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 AURKAIP1Q9NWT8 199 aaPredicted RBP13.74□□□□□ -0.21
RTN1-209ENST00000611068 STRAPQ9Y3F4 350 aaKnown RBP13.74□□□□□ -0.21
RTN1-209ENST00000611068 TRBV24-1A0A075B6N3 115 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 A0A1W2PN81 502 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 HSBP1L1C9JCN9 74 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 P2RY10O00398 339 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 KLK10O43240 276 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 TLX3O43711 291 aaPredicted RBP13.73□□□□□ -0.21
RTN1-209ENST00000611068 SCGB1D2O95969 90 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 CHRNA7P36544 502 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 ASCL1P50553 236 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 CHRFAM7AQ494W8 412 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 ADGRE4PQ86SQ3 457 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 SLC24A4Q8NFF2 622 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 MRGPRDQ8TDS7 321 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 ULBP2Q9BZM5 246 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 SLC5A6Q9Y289 635 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 ACACAQ13085 2346 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 ANKRD11Q6UB99 2663 aaPredicted RBP13.73□□□□□ -0.21
RTN1-209ENST00000611068 C5orf63A6NC05 138 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 CHRM2P08172 466 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 GNB3P16520 340 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 LHX2P50458 406 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 RTBDNQ9BSG5 229 aaPredicted RBP13.73□□□□□ -0.21
RTN1-209ENST00000611068 CALHM2Q9HA72 323 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 TAS2R4Q9NYW5 299 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 ZNF581Q9P0T4 197 aa13.73□□□□□ -0.21
RTN1-209ENST00000611068 NPIPB13A6NJU9 1138 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 NPIPB4C9JG80 1138 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 KLRC4-KLRK1H3BQV0 150 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 RRADP55042 308 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 PRSS12P56730 875 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 ATP6V1FQ16864 119 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 AAED1Q7RTV5 226 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 SMIM15Q7Z3B0 74 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 TMEM37Q8WXS4 190 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 FAM46BQ96A09 425 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 ZNF2Q9BSG1 426 aaPredicted RBP13.72□□□□□ -0.21
RTN1-209ENST00000611068 SMDT1Q9H4I9 107 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 SEPSECSQ9HD40 501 aaKnown RBP13.72□□□□□ -0.21
RTN1-209ENST00000611068 CKLFQ9UBR5 152 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 OSGIN2Q9Y236 505 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 TNRC6AQ8NDV7 1962 aaKnown RBP13.72□□□□□ -0.21
RTN1-209ENST00000611068 FAM221AA4D161 298 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 TMEM212A6NML5 194 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 GLRA1P23415 457 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 HOXC12P31275 282 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 P2RY1P47900 373 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 ROM1Q03395 351 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 HIST3H3Q16695 136 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 OR8G2PQ6IF36 304 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 COMMD2Q86X83 199 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 TMEM123Q8N131 208 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 KLF13Q9Y2Y9 288 aaPredicted RBP13.72□□□□□ -0.21
RTN1-209ENST00000611068 RNF115Q9Y4L5 304 aa13.72□□□□□ -0.21
RTN1-209ENST00000611068 ZNF716A6NP11 495 aa13.71□□□□□ -0.21
RTN1-209ENST00000611068 OR10J1P30954 320 aa13.71□□□□□ -0.21
RTN1-209ENST00000611068 GUCA1AP43080 201 aaPredicted RBP13.71□□□□□ -0.21
RTN1-209ENST00000611068 PDLIM4P50479 330 aa13.71□□□□□ -0.21
RTN1-209ENST00000611068 CLDN18P56856 261 aa13.71□□□□□ -0.21
RTN1-209ENST00000611068 P4HA3Q7Z4N8 544 aa13.71□□□□□ -0.21
RTN1-209ENST00000611068 GCNT2Q8N0V5 402 aa13.71□□□□□ -0.21
RTN1-209ENST00000611068 STPG4Q8N801 248 aa13.71□□□□□ -0.21
RTN1-209ENST00000611068 ZFP62Q8NB50 900 aaPredicted RBP13.71□□□□□ -0.21
RTN1-209ENST00000611068 SLC35E1Q96K37 410 aa13.71□□□□□ -0.21
RTN1-209ENST00000611068 VPS25Q9BRG1 176 aa13.71□□□□□ -0.21
RTN1-209ENST00000611068 PRRG4Q9BZD6 226 aa13.71□□□□□ -0.21
RTN1-209ENST00000611068 SRD5A3Q9H8P0 318 aa13.71□□□□□ -0.21
RTN1-209ENST00000611068 YLPM1P49750 1951 aaKnown RBP13.71□□□□□ -0.21
RTN1-209ENST00000611068 A0A0U1RQV5 110 aa13.71□□□□□ -0.22
RTN1-209ENST00000611068 F5H5K5 113 aa13.71□□□□□ -0.22
RTN1-209ENST00000611068 B4GALT1P15291 398 aa13.71□□□□□ -0.22
RTN1-209ENST00000611068 TUBG1P23258 451 aa13.71□□□□□ -0.22
RTN1-209ENST00000611068 HSD11B1P28845 292 aa13.71□□□□□ -0.22
RTN1-209ENST00000611068 OR3A2P47893 321 aa13.71□□□□□ -0.22
RTN1-209ENST00000611068 SPOCK1Q08629 439 aa13.71□□□□□ -0.22
RTN1-209ENST00000611068 CLEC12BQ2HXU8 276 aa13.71□□□□□ -0.22
RTN1-209ENST00000611068 CATSPERDQ86XM0 798 aa13.71□□□□□ -0.22
RTN1-209ENST00000611068 TUSC5Q8IXB3 177 aa13.71□□□□□ -0.22
RTN1-209ENST00000611068 BORCS7-ASMTA0A0B4J1R7 106 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms