RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 BPIFCQ8NFQ6 507 aa11.49□□□□□ -0.57
NEK3-205ENST00000610828 DMBX1Q8NFW5 382 aa11.49□□□□□ -0.57
NEK3-205ENST00000610828 OR5D13Q8NGL4 314 aa11.49□□□□□ -0.57
NEK3-205ENST00000610828 S100PBPQ96BU1 408 aa11.49□□□□□ -0.57
NEK3-205ENST00000610828 BSCL2Q96G97 398 aaPredicted RBP11.49□□□□□ -0.57
NEK3-205ENST00000610828 MBNL3Q9NUK0 354 aaKnown RBP11.49□□□□□ -0.57
NEK3-205ENST00000610828 SPTBN2O15020 2390 aa11.49□□□□□ -0.57
NEK3-205ENST00000610828 KIAA2026Q5HYC2 2103 aa11.49□□□□□ -0.57
NEK3-205ENST00000610828 NPIPB11E5RHQ5 1161 aa11.49□□□□□ -0.57
NEK3-205ENST00000610828 HOXD4P09016 255 aaPredicted RBP11.49□□□□□ -0.57
NEK3-205ENST00000610828 VDAC1P21796 283 aa11.49□□□□□ -0.57
NEK3-205ENST00000610828 GPR157Q5UAW9 335 aa11.49□□□□□ -0.57
NEK3-205ENST00000610828 ASCL5Q7RTU5 278 aa11.49□□□□□ -0.57
NEK3-205ENST00000610828 ARL11Q969Q4 196 aa11.49□□□□□ -0.57
NEK3-205ENST00000610828 DUSP13Q9UII6 198 aa11.49□□□□□ -0.57
NEK3-205ENST00000610828 M0R1B8 84 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 TFF1P04155 84 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 AKR1C2P52895 323 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 POLR2GP62487 172 aaKnown RBP eCLIP11.48□□□□□ -0.57
NEK3-205ENST00000610828 NHLH2Q02577 135 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 AKR1C1Q04828 323 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 BTN1A1Q13410 526 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 TESK1Q15569 626 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 NMSQ5H8A3 153 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 ACP7Q6ZNF0 438 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 UBAC2Q8NBM4 344 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 KCNS2Q9ULS6 477 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 WASF3Q9UPY6 502 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 WIPI2Q9Y4P8 454 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 RP1L1Q8IWN7 2480 aaPredicted RBP11.48□□□□□ -0.57
NEK3-205ENST00000610828 DUXBA0A1W2PPF3 345 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 RAB19A4D1S5 217 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 PROB1E7EW31 1015 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 MKRN2OSH3BPM6 223 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.48□□□□□ -0.57
NEK3-205ENST00000610828 MED6O75586 246 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 NXPH3O95157 252 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 SERPINE2P07093 398 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 CEACAM6P40199 344 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 EIF2S3LQ2VIR3 472 aaKnown RBP11.48□□□□□ -0.57
NEK3-205ENST00000610828 CXorf66Q5JRM2 361 aaPredicted RBP11.48□□□□□ -0.57
NEK3-205ENST00000610828 TIMM23BQ5SRD1 257 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 FAM169BQ8N8A8 192 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 MAGT1Q9H0U3 335 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 TLNRD1Q9H1K6 362 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 HRH4Q9H3N8 390 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 PPP1R3CQ9UQK1 317 aa11.48□□□□□ -0.57
NEK3-205ENST00000610828 ANKRD11Q6UB99 2663 aaPredicted RBP11.48□□□□□ -0.57
NEK3-205ENST00000610828 MAP1BP46821 2468 aaKnown RBP11.47□□□□□ -0.57
NEK3-205ENST00000610828 LOC105371267A0A1B0GV96 52 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 TMEM30CPA0ZSE6 113 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 SSSCA1O60232 199 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 IGLV2-14P01704 120 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 OR8U9P0C7N5 309 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 PSG2P11465 335 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 PVALBP20472 110 aaPredicted RBP11.47□□□□□ -0.57
NEK3-205ENST00000610828 LMO1P25800 156 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 TIMP3P35625 211 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 CAV2P51636 162 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 AESQ08117 197 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 HMGN3Q15651 99 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 PXDC1Q5TGL8 231 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 UQCC3Q6UW78 93 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 FAM180AQ6UWF9 173 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 C1orf174Q8IYL3 243 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 OR2Z1Q8NG97 314 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 OR8U1Q8NH10 309 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 PARP12Q9H0J9 701 aaKnown RBP11.47□□□□□ -0.57
NEK3-205ENST00000610828 KCNIP1Q9NZI2 227 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 C1QTNF9BB2RNN3 333 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 PTBP3O95758 552 aaKnown RBP11.47□□□□□ -0.57
NEK3-205ENST00000610828 LRP11Q86VZ4 500 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 OR2C3Q8N628 320 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 IL22RA2Q969J5 263 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 MUCL1Q96DR8 90 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 SAT2Q96F10 170 aaPredicted RBP11.47□□□□□ -0.57
NEK3-205ENST00000610828 SMIM8Q96KF7 97 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 WFDC1Q9HC57 220 aa11.47□□□□□ -0.57
NEK3-205ENST00000610828 BORCS7-ASMTA0A0B4J1R7 106 aa11.46□□□□□ -0.57
NEK3-205ENST00000610828 CLEC18AA5D8T8 446 aa11.46□□□□□ -0.57
NEK3-205ENST00000610828 TSPAN4O14817 238 aa11.46□□□□□ -0.57
NEK3-205ENST00000610828 CRYAAP02489 173 aa11.46□□□□□ -0.57
NEK3-205ENST00000610828 HEXAP06865 529 aa11.46□□□□□ -0.57
NEK3-205ENST00000610828 ZNF16P17020 682 aaPredicted RBP11.46□□□□□ -0.57
NEK3-205ENST00000610828 EPHA1P21709 976 aa11.46□□□□□ -0.57
NEK3-205ENST00000610828 GABRA2P47869 451 aa11.46□□□□□ -0.57
NEK3-205ENST00000610828 SULT1A2P50226 295 aa11.46□□□□□ -0.57
NEK3-205ENST00000610828 ASCL1P50553 236 aa11.46□□□□□ -0.57
NEK3-205ENST00000610828 ARHGDIBP52566 201 aa11.46□□□□□ -0.57
NEK3-205ENST00000610828 EWSR1Q01844 656 aaKnown RBP eCLIP11.46□□□□□ -0.57
NEK3-205ENST00000610828 MST1LQ2TV78 715 aa11.46□□□□□ -0.57
NEK3-205ENST00000610828 SMIM21Q3B7S5 101 aa11.46□□□□□ -0.57
NEK3-205ENST00000610828 KRTCAP3Q53RY4 240 aa11.46□□□□□ -0.57
NEK3-205ENST00000610828 CLEC18CQ8NCF0 446 aa11.46□□□□□ -0.57
NEK3-205ENST00000610828 ABHD17AQ96GS6 310 aa11.46□□□□□ -0.57
NEK3-205ENST00000610828 MMP26Q9NRE1 261 aa11.46□□□□□ -0.57
NEK3-205ENST00000610828 NBEAQ8NFP9 2946 aa11.46□□□□□ -0.58
NEK3-205ENST00000610828 FAM24AA6NFZ4 105 aa11.46□□□□□ -0.58
NEK3-205ENST00000610828 LPAR6P43657 344 aa11.46□□□□□ -0.58
NEK3-205ENST00000610828 OR3A1P47881 315 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms