RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 MDFIQ99750 246 aa10.7□□□□□ -0.7
SPG7-209ENST00000564047 C20orf85Q9H1P6 137 aa10.7□□□□□ -0.7
SPG7-209ENST00000564047 IFT46Q9NQC8 304 aa10.7□□□□□ -0.7
SPG7-209ENST00000564047 MBNL3Q9NUK0 354 aaKnown RBP10.7□□□□□ -0.7
SPG7-209ENST00000564047 ZNF107Q9UII5 783 aaPredicted RBP10.7□□□□□ -0.7
SPG7-209ENST00000564047 KIF25Q9UIL4 384 aa10.7□□□□□ -0.7
SPG7-209ENST00000564047 FN1P02751 2386 aaKnown RBP10.7□□□□□ -0.7
SPG7-209ENST00000564047 TRAV6A0A075B6T7 132 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 MEIKINA0A087WXM9 373 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 ODAMA1E959 279 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 MEIS3P1A6NDR6 274 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 IGHV2-5P01817 119 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 IL5P05113 134 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 ANXA3P12429 323 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 NAT1P18440 290 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 CCR6P51684 374 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 EDDM3BP56851 147 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 FCN2Q15485 313 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 CR1LQ2VPA4 569 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 Q5PR19 223 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 METTL11BQ5VVY1 283 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 WDR25Q64LD2 544 aaPredicted RBP10.69□□□□□ -0.7
SPG7-209ENST00000564047 Q6ZPA2 131 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 Q6ZS49 121 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 MOB1BQ7L9L4 216 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 OR4K15Q8NH41 348 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 CLDND2Q8NHS1 167 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 RAB39BQ96DA2 213 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 ST6GALNAC5Q9BVH7 336 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 NARFLQ9H6Q4 476 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 Q9N2K0 584 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 OR6C3Q9NZP0 311 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 LPAR3Q9UBY5 353 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 CLN8Q9UBY8 286 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 TRAPPC2LQ9UL33 140 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 MGAT4AQ9UM21 535 aa10.69□□□□□ -0.7
SPG7-209ENST00000564047 FBN1P35555 2871 aaKnown RBP10.68□□□□□ -0.7
SPG7-209ENST00000564047 TRBV23-1A0A0A0MS06 115 aa10.68□□□□□ -0.7
SPG7-209ENST00000564047 KIR2DS1A0A191URI9 304 aa10.68□□□□□ -0.7
SPG7-209ENST00000564047 SULT1A3P0DMM9 295 aa10.68□□□□□ -0.7
SPG7-209ENST00000564047 SULT1A4P0DMN0 295 aa10.68□□□□□ -0.7
SPG7-209ENST00000564047 KIR2DS4P43632 304 aa10.68□□□□□ -0.7
SPG7-209ENST00000564047 LMO4P61968 165 aa10.68□□□□□ -0.7
SPG7-209ENST00000564047 GNB2P62879 340 aa10.68□□□□□ -0.7
SPG7-209ENST00000564047 MEF2CQ06413 473 aaPredicted RBP10.68□□□□□ -0.7
SPG7-209ENST00000564047 KIR2DS1Q14954 304 aa10.68□□□□□ -0.7
SPG7-209ENST00000564047 ESCO2Q56NI9 601 aa10.68□□□□□ -0.7
SPG7-209ENST00000564047 TRAT1Q6PIZ9 186 aa10.68□□□□□ -0.7
SPG7-209ENST00000564047 Q71RC1 249 aaPredicted RBP10.68□□□□□ -0.7
SPG7-209ENST00000564047 FGFRL1Q8N441 504 aa10.68□□□□□ -0.7
SPG7-209ENST00000564047 GVQW1Q8N7I0 195 aa10.68□□□□□ -0.7
SPG7-209ENST00000564047 TPRX1Q8N7U7 411 aa10.68□□□□□ -0.7
SPG7-209ENST00000564047 TMEM229BQ8NBD8 167 aa10.68□□□□□ -0.7
SPG7-209ENST00000564047 BEST4Q8NFU0 473 aa10.68□□□□□ -0.7
SPG7-209ENST00000564047 CCDC107Q8WV48 283 aa10.68□□□□□ -0.7
SPG7-209ENST00000564047 GIMAP1Q8WWP7 306 aa10.68□□□□□ -0.7
SPG7-209ENST00000564047 HYLS1Q96M11 299 aa10.68□□□□□ -0.7
SPG7-209ENST00000564047 GON7Q9BXV9 100 aa10.68□□□□□ -0.7
SPG7-209ENST00000564047 RANBP3Q9H6Z4 567 aaPredicted RBP10.68□□□□□ -0.7
SPG7-209ENST00000564047 ZNF286AQ9HBT8 521 aa10.68□□□□□ -0.7
SPG7-209ENST00000564047 ZNF230Q9UIE0 474 aaPredicted RBP10.68□□□□□ -0.7
SPG7-209ENST00000564047 TRGV10A0A0A0MS01 117 aa10.67□□□□□ -0.7
SPG7-209ENST00000564047 IGHV4-61A0A0C4DH41 118 aa10.67□□□□□ -0.7
SPG7-209ENST00000564047 hADV38S2A0JD32 116 aa10.67□□□□□ -0.7
SPG7-209ENST00000564047 SNRPGP15A8MWD9 76 aa10.67□□□□□ -0.7
SPG7-209ENST00000564047 TRDCB7Z8K6 153 aa10.67□□□□□ -0.7
SPG7-209ENST00000564047 NDUFB6O95139 128 aa10.67□□□□□ -0.7
SPG7-209ENST00000564047 HEXAP06865 529 aa10.67□□□□□ -0.7
SPG7-209ENST00000564047 RCC1P18754 421 aaPredicted RBP10.67□□□□□ -0.7
SPG7-209ENST00000564047 GZMHP20718 246 aa10.67□□□□□ -0.7
SPG7-209ENST00000564047 TAS2R19P59542 299 aa10.67□□□□□ -0.7
SPG7-209ENST00000564047 SEC61A1P61619 476 aaKnown RBP10.67□□□□□ -0.7
SPG7-209ENST00000564047 C6orf183Q5T699 404 aa10.67□□□□□ -0.7
SPG7-209ENST00000564047 KRTAP1-3Q8IUG1 177 aa10.67□□□□□ -0.7
SPG7-209ENST00000564047 ZNF565Q8N9K5 539 aa10.67□□□□□ -0.7
SPG7-209ENST00000564047 MAFIPQ8WZ33 124 aa10.67□□□□□ -0.7
SPG7-209ENST00000564047 H1FXQ92522 213 aaKnown RBP10.67□□□□□ -0.7
SPG7-209ENST00000564047 CORO2AQ92828 525 aa10.67□□□□□ -0.7
SPG7-209ENST00000564047 SNAPC3Q92966 411 aa10.67□□□□□ -0.7
SPG7-209ENST00000564047 DCTN5Q9BTE1 182 aa10.67□□□□□ -0.7
SPG7-209ENST00000564047 SSBP3Q9BWW4 388 aaPredicted RBP10.67□□□□□ -0.7
SPG7-209ENST00000564047 BEX2Q9BXY8 128 aa10.67□□□□□ -0.7
SPG7-209ENST00000564047 C19orf12Q9NSK7 152 aa10.67□□□□□ -0.7
SPG7-209ENST00000564047 KCNIP1Q9NZI2 227 aa10.67□□□□□ -0.7
SPG7-209ENST00000564047 ANXA10Q9UJ72 324 aa10.67□□□□□ -0.7
SPG7-209ENST00000564047 TLN2Q9Y4G6 2542 aa10.67□□□□□ -0.7
SPG7-209ENST00000564047 MXRA5Q9NR99 2828 aa10.66□□□□□ -0.7
SPG7-209ENST00000564047 IGKV1D-8A0A087WSZ0 117 aa10.66□□□□□ -0.7
SPG7-209ENST00000564047 A8MXK9 166 aa10.66□□□□□ -0.7
SPG7-209ENST00000564047 FCER2P06734 321 aa10.66□□□□□ -0.7
SPG7-209ENST00000564047 AKAIN1P0CW23 69 aa10.66□□□□□ -0.7
SPG7-209ENST00000564047 CGB3P0DN86 165 aa10.66□□□□□ -0.7
SPG7-209ENST00000564047 CGB7P0DN87 165 aa10.66□□□□□ -0.7
SPG7-209ENST00000564047 TBPP20226 339 aa10.66□□□□□ -0.7
SPG7-209ENST00000564047 USF1P22415 310 aaPredicted RBP10.66□□□□□ -0.7
SPG7-209ENST00000564047 RPL31P62899 125 aaKnown RBP10.66□□□□□ -0.7
SPG7-209ENST00000564047 HLA-DRB3P79483 266 aa10.66□□□□□ -0.7
SPG7-209ENST00000564047 HMGN3Q15651 99 aa10.66□□□□□ -0.7
SPG7-209ENST00000564047 ACTBL2Q562R1 376 aa10.66□□□□□ -0.7
SPG7-209ENST00000564047 TMEM200BQ69YZ2 307 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms