RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 OR3A1P47881 315 aa16.06■□□□□ 0.16
SMPD3-203ENST00000563226 SRPXP78539 464 aa16.06■□□□□ 0.16
SMPD3-203ENST00000563226 COL10A1Q03692 680 aa16.06■□□□□ 0.16
SMPD3-203ENST00000563226 FAM53AQ6NSI3 398 aaPredicted RBP16.06■□□□□ 0.16
SMPD3-203ENST00000563226 CLEC9AQ6UXN8 241 aa16.06■□□□□ 0.16
SMPD3-203ENST00000563226 CMTM1Q8IZ96 169 aa16.06■□□□□ 0.16
SMPD3-203ENST00000563226 BVESQ8NE79 360 aa16.06■□□□□ 0.16
SMPD3-203ENST00000563226 ASF1BQ9NVP2 202 aa16.06■□□□□ 0.16
SMPD3-203ENST00000563226 PFDN2Q9UHV9 154 aa16.06■□□□□ 0.16
SMPD3-203ENST00000563226 GLS2Q9UI32 602 aa16.06■□□□□ 0.16
SMPD3-203ENST00000563226 CD200P41217 278 aa16.06■□□□□ 0.16
SMPD3-203ENST00000563226 KLF3P57682 345 aaPredicted RBP16.06■□□□□ 0.16
SMPD3-203ENST00000563226 OR1L1Q8NH94 360 aa16.06■□□□□ 0.16
SMPD3-203ENST00000563226 PRR7Q8TB68 274 aa16.06■□□□□ 0.16
SMPD3-203ENST00000563226 MARVELD3Q96A59 401 aa16.06■□□□□ 0.16
SMPD3-203ENST00000563226 BSCL2Q96G97 398 aaPredicted RBP16.06■□□□□ 0.16
SMPD3-203ENST00000563226 ZC4H2Q9NQZ6 224 aa16.06■□□□□ 0.16
SMPD3-203ENST00000563226 NBEAQ8NFP9 2946 aa16.05■□□□□ 0.16
SMPD3-203ENST00000563226 H0Y980 276 aa16.05■□□□□ 0.16
SMPD3-203ENST00000563226 HSPA12AO43301 675 aa16.05■□□□□ 0.16
SMPD3-203ENST00000563226 SMIM21Q3B7S5 101 aa16.05■□□□□ 0.16
SMPD3-203ENST00000563226 RPL7L1Q6DKI1 246 aaKnown RBP16.05■□□□□ 0.16
SMPD3-203ENST00000563226 CD177Q8N6Q3 437 aa16.05■□□□□ 0.16
SMPD3-203ENST00000563226 TPRX1Q8N7U7 411 aa16.05■□□□□ 0.16
SMPD3-203ENST00000563226 OR51H1Q8NH63 302 aa16.05■□□□□ 0.16
SMPD3-203ENST00000563226 TMED6Q8WW62 240 aa16.05■□□□□ 0.16
SMPD3-203ENST00000563226 OR2V2Q96R30 315 aa16.05■□□□□ 0.16
SMPD3-203ENST00000563226 SPEF1Q9Y4P9 236 aa16.05■□□□□ 0.16
SMPD3-203ENST00000563226 ICE1Q9Y2F5 2266 aa16.04■□□□□ 0.16
SMPD3-203ENST00000563226 C12orf77C9JDV5 145 aa16.04■□□□□ 0.16
SMPD3-203ENST00000563226 F2RP25116 425 aa16.04■□□□□ 0.16
SMPD3-203ENST00000563226 THOC7Q6I9Y2 204 aaKnown RBP16.04■□□□□ 0.16
SMPD3-203ENST00000563226 MRGPRGQ86SM5 289 aa16.04■□□□□ 0.16
SMPD3-203ENST00000563226 ERGIC1Q969X5 290 aa16.04■□□□□ 0.16
SMPD3-203ENST00000563226 FBXL17Q9UF56 701 aa16.04■□□□□ 0.16
SMPD3-203ENST00000563226 ZNF835Q9Y2P0 537 aa16.04■□□□□ 0.16
SMPD3-203ENST00000563226 RCL1Q9Y2P8 373 aaKnown RBP16.04■□□□□ 0.16
SMPD3-203ENST00000563226 PCNX1Q96RV3 2341 aa16.04■□□□□ 0.16
SMPD3-203ENST00000563226 PLCE1Q9P212 2302 aa16.04■□□□□ 0.16
SMPD3-203ENST00000563226 IGLV3-9A0A075B6K5 115 aa16.04■□□□□ 0.16
SMPD3-203ENST00000563226 MEX3AA1L020 520 aaKnown RBP16.04■□□□□ 0.16
SMPD3-203ENST00000563226 E5RGE8 158 aa16.04■□□□□ 0.16
SMPD3-203ENST00000563226 ADAM20O43506 726 aa16.04■□□□□ 0.16
SMPD3-203ENST00000563226 SPRY3O43610 288 aa16.04■□□□□ 0.16
SMPD3-203ENST00000563226 HEXAP06865 529 aa16.04■□□□□ 0.16
SMPD3-203ENST00000563226 CEACAM6P40199 344 aa16.04■□□□□ 0.16
SMPD3-203ENST00000563226 SLC35E4Q6ICL7 350 aa16.04■□□□□ 0.16
SMPD3-203ENST00000563226 BOLLQ8N9W6 283 aaKnown RBP16.04■□□□□ 0.16
SMPD3-203ENST00000563226 DMBX1Q8NFW5 382 aa16.04■□□□□ 0.16
SMPD3-203ENST00000563226 MRPL37Q9BZE1 423 aaKnown RBP16.04■□□□□ 0.16
SMPD3-203ENST00000563226 SMIM3Q9BZL3 60 aa16.04■□□□□ 0.16
SMPD3-203ENST00000563226 PIGMQ9H3S5 423 aa16.04■□□□□ 0.16
SMPD3-203ENST00000563226 NSG2Q9Y328 171 aa16.04■□□□□ 0.16
SMPD3-203ENST00000563226 LGALS8O00214 317 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 CD40P25942 277 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 NMSQ5H8A3 153 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 OR5D13Q8NGL4 314 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 MEGF10Q96KG7 1140 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 PPP1R3CQ9UQK1 317 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 CACNA1DQ01668 2161 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 SRRM5B3KS81 715 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 ST8SIA3O43173 380 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 FGF2P09038 288 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 OR8U9P0C7N5 309 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 PSG2P11465 335 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 GABRA2P47869 451 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 GLIPR1P48060 266 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 TMEM33P57088 247 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 MZT1Q08AG7 82 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 MOGAT3Q86VF5 341 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 GCSAMQ8N6F7 178 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 OR8U1Q8NH10 309 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 ANGPTL6Q8NI99 470 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 MRGPRDQ8TDS7 321 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 LINC00052Q96N35 136 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 ESRP2Q9H6T0 727 aaKnown RBP16.03■□□□□ 0.16
SMPD3-203ENST00000563226 KCNS2Q9ULS6 477 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 POMT1Q9Y6A1 747 aa16.03■□□□□ 0.16
SMPD3-203ENST00000563226 SMG1Q96Q15 3661 aaKnown RBP16.02■□□□□ 0.16
SMPD3-203ENST00000563226 IGHV3OR15-7A0A075B7D8 119 aa16.02■□□□□ 0.15
SMPD3-203ENST00000563226 IFNL4K9M1U5 179 aa16.02■□□□□ 0.15
SMPD3-203ENST00000563226 GNMTQ14749 295 aa16.02■□□□□ 0.15
SMPD3-203ENST00000563226 ITLN1Q8WWA0 313 aa16.02■□□□□ 0.15
SMPD3-203ENST00000563226 PLEKHA2Q9HB19 425 aa16.02■□□□□ 0.15
SMPD3-203ENST00000563226 KCNIP1Q9NZI2 227 aa16.02■□□□□ 0.15
SMPD3-203ENST00000563226 RBM7Q9Y580 266 aaKnown RBP16.02■□□□□ 0.15
SMPD3-203ENST00000563226 IGKV1D-17A0A075B6S4 117 aa16.01■□□□□ 0.15
SMPD3-203ENST00000563226 A0A0G2JRQ6 117 aa16.01■□□□□ 0.15
SMPD3-203ENST00000563226 KRBOX4Q5JUW0 171 aa16.01■□□□□ 0.15
SMPD3-203ENST00000563226 CCDC28AQ8IWP9 274 aa16.01■□□□□ 0.15
SMPD3-203ENST00000563226 OR52L2PQ8NGH6 319 aa16.01■□□□□ 0.15
SMPD3-203ENST00000563226 DCTN5Q9BTE1 182 aa16.01■□□□□ 0.15
SMPD3-203ENST00000563226 DNTTIP1Q9H147 329 aa16.01■□□□□ 0.15
SMPD3-203ENST00000563226 RAXQ9Y2V3 346 aa16.01■□□□□ 0.15
SMPD3-203ENST00000563226 TLN1Q9Y490 2541 aaKnown RBP16.01■□□□□ 0.15
SMPD3-203ENST00000563226 IGF2RP11717 2491 aa16.01■□□□□ 0.15
SMPD3-203ENST00000563226 A8MXK9 166 aa16.01■□□□□ 0.15
SMPD3-203ENST00000563226 TAAR5O14804 337 aa16.01■□□□□ 0.15
SMPD3-203ENST00000563226 FGF16O43320 207 aa16.01■□□□□ 0.15
SMPD3-203ENST00000563226 HBZP02008 142 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms