RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ITPR3Q14573 2671 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 CCDC168Q8NDH2 2452 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 AKAP6Q13023 2319 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 CACNA1DQ01668 2161 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 A0A0B4J203 849 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 TRAV24A0A0B4J272 114 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 IGHV4-61A0A0C4DH41 118 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 A0A1W2PP11 408 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 SERPINE3A8MV23 424 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 MCRIP1C9JLW8 97 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 SLC33A1O00400 549 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-213ENST00000550629 DVL1O14640 695 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 XRCC3O43542 346 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 CLPXO76031 633 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 OR7C1O76099 320 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-213ENST00000550629 PAHP00439 452 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 GYPAP02724 150 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 TK1P04183 234 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 ZNF44P15621 663 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 GABRR1P24046 479 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 CHATP28329 748 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 DUSP1P28562 367 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 ERP29P30040 261 aaKnown RBP4.73□□□□□ -1.65
SCAF11-213ENST00000550629 TALDO1P37837 337 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 MNDAP41218 407 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 OR3A1P47881 315 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 EFNB2P52799 333 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 P2RX3P56373 397 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 GMFBP60983 142 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 MEF2CQ06413 473 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-213ENST00000550629 TAF9Q16594 264 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 ZNF260Q3ZCT1 412 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 PAN3Q58A45 887 aaKnown RBP4.73□□□□□ -1.65
SCAF11-213ENST00000550629 OR10K2Q6IF99 312 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 LYPD2Q6UXB3 125 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 BAIAP2L2Q6UXY1 529 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 ZNF841Q6ZN19 808 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 C17orf107Q6ZR85 190 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 CCDC28AQ8IWP9 274 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 GAPTQ8N292 157 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 FAM216BQ8N7L0 139 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 SUMF2Q8NBJ7 301 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 WFDC11Q8NEX6 87 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 OR10R2Q8NGX6 335 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 CLDND2Q8NHS1 167 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 MCFD2Q8NI22 146 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 PHF21AQ96BD5 680 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 SLC25A38Q96DW6 304 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 RAB3CQ96E17 227 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 SEH1LQ96EE3 360 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 WDFY2Q96P53 400 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 NEDD4LQ96PU5 975 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 CCL13Q99616 98 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 TM2D2Q9BX73 214 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 ATG5Q9H1Y0 275 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 RIMS4Q9H426 269 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-213ENST00000550629 PTTG2Q9NZH5 202 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 IL36RNQ9UBH0 155 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 COMMD3Q9UBI1 195 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 SLC25A10Q9UBX3 287 aaPredicted RBP4.73□□□□□ -1.65
SCAF11-213ENST00000550629 CLN8Q9UBY8 286 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 OR14J1Q9UGF5 321 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 MAB21L2Q9Y586 359 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 PEX16Q9Y5Y5 336 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 USF3Q68DE3 2245 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 CREBBPQ92793 2442 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 MAST4O15021 2626 aa4.73□□□□□ -1.65
SCAF11-213ENST00000550629 A0A0A6YYD4 124 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 TRBV6-6A0A0A6YYG2 114 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 A0A1W2PPH5 198 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 TMEM30CPA0ZSE6 113 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 B4DSR2 109 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 SIRPB1O00241 398 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 MFNGO00587 321 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 FOXH1O75593 365 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 RBP4P02753 201 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 LIPFP07098 398 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 MELTFP08582 738 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 HIST1H1DP16402 221 aaKnown RBP4.72□□□□□ -1.65
SCAF11-213ENST00000550629 BLVRBP30043 206 aaPredicted RBP4.72□□□□□ -1.65
SCAF11-213ENST00000550629 GABRA2P47869 451 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 VEGFCP49767 419 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 GNB2P62879 340 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 PITPNAQ00169 270 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 SCN1BQ07699 218 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 GRK1Q15835 563 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 PNLIPRP3Q17RR3 467 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 CNPY1Q3B7I2 92 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 ATAD3CQ5T2N8 411 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 HACD4Q5VWC8 232 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 WDR25Q64LD2 544 aaPredicted RBP4.72□□□□□ -1.65
SCAF11-213ENST00000550629 FAM90A2PQ658T7 463 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 SIGIRRQ6IA17 410 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 SLC35E4Q6ICL7 350 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 ZNF497Q6ZNH5 498 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 Q6ZTK2 550 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 GDPD3Q7L5L3 318 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 MOB1BQ7L9L4 216 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 ZNF554Q86TJ5 538 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 BATF2Q8N1L9 274 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms