RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 IGHV3-7P01780 117 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 EGR1P18146 543 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 S100A7P31151 101 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 CDX1P47902 265 aaPredicted RBP4.75□□□□□ -1.65
LIMA1-203ENST00000547825 ZNF133P52736 654 aaPredicted RBP4.75□□□□□ -1.65
LIMA1-203ENST00000547825 FAM3BP58499 235 aaPredicted RBP4.75□□□□□ -1.65
LIMA1-203ENST00000547825 ATG4DQ86TL0 474 aaPredicted RBP4.75□□□□□ -1.65
LIMA1-203ENST00000547825 CLEC18CQ8NCF0 446 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 ST6GALNAC3Q8NDV1 305 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 CADM4Q8NFZ8 388 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 OR10A7Q8NGE5 316 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 OR13G1Q8NGZ3 307 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 OR10J5Q8NHC4 309 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 POC1BQ8TC44 478 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 VN1R17PQ8TDU5 208 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 SPSB4Q96A44 273 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 RSG1Q9BU20 258 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 TPPP3Q9BW30 176 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 MAP1LC3BQ9GZQ8 125 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 SIRT7Q9NRC8 400 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 P4HTMQ9NXG6 502 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 SLC2A8Q9NY64 477 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 COA4Q9NYJ1 87 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 C19orf25Q9UFG5 118 aaPredicted RBP4.75□□□□□ -1.65
LIMA1-203ENST00000547825 SLC17A4Q9Y2C5 497 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 PTRH2Q9Y3E5 179 aaKnown RBP4.75□□□□□ -1.65
LIMA1-203ENST00000547825 DMRT1Q9Y5R6 373 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.75□□□□□ -1.65
LIMA1-203ENST00000547825 A0A1W2PR77 199 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 CRYAAP02489 173 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 SNRPCP09234 159 aaKnown RBP4.75□□□□□ -1.65
LIMA1-203ENST00000547825 HKR1P10072 659 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 CCL2P13500 99 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 PRF1P14222 555 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 TCN2P20062 427 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 EDDM3BP56851 147 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 DCAF7P61962 342 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 SLC35B1P78383 322 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 SRPXP78539 464 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 EWSR1Q01844 656 aaKnown RBP eCLIP4.75□□□□□ -1.65
LIMA1-203ENST00000547825 EDDM3AQ14507 147 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 BSXQ3C1V8 233 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 ZNF260Q3ZCT1 412 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 CXorf66Q5JRM2 361 aaPredicted RBP4.75□□□□□ -1.65
LIMA1-203ENST00000547825 DTX1Q86Y01 620 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 NAT6Q93015 286 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 COX14Q96I36 57 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 ADGRG7Q96K78 797 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 UHRF2Q96PU4 802 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 TBX15Q96SF7 602 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 ABHD14AQ9BUJ0 271 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 NAA60Q9H7X0 242 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 SLC2A9Q9NRM0 540 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 FKBP11Q9NYL4 201 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 ERRFI1Q9UJM3 462 aaPredicted RBP4.75□□□□□ -1.65
LIMA1-203ENST00000547825 PRRC2CQ9Y520 2896 aaKnown RBP4.75□□□□□ -1.65
LIMA1-203ENST00000547825 FER1L5A0AVI2 2057 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 ZNF729A6NN14 1252 aaPredicted RBP4.75□□□□□ -1.65
LIMA1-203ENST00000547825 SIRPB1O00241 398 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 ZNF737O75373 536 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 P04436 131 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 HNRNPA3P51991 378 aaKnown RBP4.75□□□□□ -1.65
LIMA1-203ENST00000547825 TCL1AP56279 114 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 RND3P61587 244 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 NAAAQ02083 359 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 ZNF816Q0VGE8 651 aaPredicted RBP4.75□□□□□ -1.65
LIMA1-203ENST00000547825 SLC10A1Q14973 349 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 ZNF124Q15973 351 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 KHDC3LQ587J8 217 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 THEM4Q5T1C6 240 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 HES3Q5TGS1 186 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 PRR27Q6MZM9 219 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 CATSPERDQ86XM0 798 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 OR4C5Q8NGB2 326 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 GNRHR2Q96P88 292 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 SPATA25Q9BR10 227 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 PECRQ9BY49 303 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 METTL1Q9UBP6 276 aaKnown RBP4.75□□□□□ -1.65
LIMA1-203ENST00000547825 CACNG5Q9UF02 275 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 ANXA10Q9UJ72 324 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 GPR132Q9UNW8 380 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 GOLT1BQ9Y3E0 138 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 RFNGQ9Y644 331 aa4.75□□□□□ -1.65
LIMA1-203ENST00000547825 TRBV5-5A0A0J9YX44 114 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 C3orf85A0A1B0GTC6 90 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 ANKRD30BLA7E2S9 258 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 PLPP3O14495 311 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 PLRG1O43660 514 aaKnown RBP4.74□□□□□ -1.65
LIMA1-203ENST00000547825 ACTL6BO94805 426 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 PGA3P0DJD8 388 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 CXCL12P48061 93 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 GRB2P62993 217 aaKnown RBP4.74□□□□□ -1.65
LIMA1-203ENST00000547825 ECH1Q13011 328 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 PIGYQ3MUY2 71 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 FAHD2BQ6P2I3 314 aaPredicted RBP4.74□□□□□ -1.65
LIMA1-203ENST00000547825 SPNS3Q6ZMD2 512 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 ADAMTS17Q8TE56 1095 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 PINX1Q96BK5 328 aaKnown RBP4.74□□□□□ -1.65
LIMA1-203ENST00000547825 FAHD2AQ96GK7 314 aa4.74□□□□□ -1.65
LIMA1-203ENST00000547825 PCGF1Q9BSM1 259 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 204.8 ms