RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 RND3P61587 244 aa11.63□□□□□ -0.55
BNIP3-202ENST00000540159 EIF3IQ13347 325 aaKnown RBP11.63□□□□□ -0.55
BNIP3-202ENST00000540159 PDZD11Q5EBL8 140 aa11.63□□□□□ -0.55
BNIP3-202ENST00000540159 RNFT1Q5M7Z0 435 aa11.63□□□□□ -0.55
BNIP3-202ENST00000540159 LRTM2Q8N967 370 aa11.63□□□□□ -0.55
BNIP3-202ENST00000540159 SPSB4Q96A44 273 aa11.63□□□□□ -0.55
BNIP3-202ENST00000540159 SLC35B3Q9H1N7 401 aa11.63□□□□□ -0.55
BNIP3-202ENST00000540159 IL36GQ9NZH8 169 aa11.63□□□□□ -0.55
BNIP3-202ENST00000540159 TAAR3PQ9P1P4 343 aa11.63□□□□□ -0.55
BNIP3-202ENST00000540159 TRAPPC2LQ9UL33 140 aa11.63□□□□□ -0.55
BNIP3-202ENST00000540159 PLCE1Q9P212 2302 aa11.63□□□□□ -0.55
BNIP3-202ENST00000540159 KALRNO60229 2985 aa11.63□□□□□ -0.55
BNIP3-202ENST00000540159 K7N7A8 449 aa11.62□□□□□ -0.55
BNIP3-202ENST00000540159 RPS10P46783 165 aaKnown RBP11.62□□□□□ -0.55
BNIP3-202ENST00000540159 ELLP55199 621 aaPredicted RBP11.62□□□□□ -0.55
BNIP3-202ENST00000540159 MPV17LQ2QL34 196 aa11.62□□□□□ -0.55
BNIP3-202ENST00000540159 PCSK4Q6UW60 755 aa11.62□□□□□ -0.55
BNIP3-202ENST00000540159 COLCA1Q6ZS62 124 aa11.62□□□□□ -0.55
BNIP3-202ENST00000540159 FAM58AQ8N1B3 248 aa11.62□□□□□ -0.55
BNIP3-202ENST00000540159 GPR146Q96CH1 333 aa11.62□□□□□ -0.55
BNIP3-202ENST00000540159 STRADBQ9C0K7 418 aa11.62□□□□□ -0.55
BNIP3-202ENST00000540159 PRO3102Q9H379 93 aa11.62□□□□□ -0.55
BNIP3-202ENST00000540159 PLEKHF2Q9H8W4 249 aa11.62□□□□□ -0.55
BNIP3-202ENST00000540159 UFSP2Q9NUQ7 469 aa11.62□□□□□ -0.55
BNIP3-202ENST00000540159 COA4Q9NYJ1 87 aa11.62□□□□□ -0.55
BNIP3-202ENST00000540159 DLL3Q9NYJ7 618 aa11.62□□□□□ -0.55
BNIP3-202ENST00000540159 GNG13Q9P2W3 67 aa11.62□□□□□ -0.55
BNIP3-202ENST00000540159 PKDREJQ9NTG1 2253 aa11.62□□□□□ -0.55
BNIP3-202ENST00000540159 DEGS1O15121 323 aa11.62□□□□□ -0.55
BNIP3-202ENST00000540159 CDS2O95674 445 aa11.62□□□□□ -0.55
BNIP3-202ENST00000540159 DEFA4P12838 97 aa11.62□□□□□ -0.55
BNIP3-202ENST00000540159 MDKP21741 143 aaPredicted RBP11.62□□□□□ -0.55
BNIP3-202ENST00000540159 MEOX2P50222 304 aa11.62□□□□□ -0.55
BNIP3-202ENST00000540159 CCDC54Q8NEL0 328 aa11.62□□□□□ -0.55
BNIP3-202ENST00000540159 TAAR9Q96RI9 348 aa11.62□□□□□ -0.55
BNIP3-202ENST00000540159 ATP23Q9Y6H3 246 aa11.62□□□□□ -0.55
BNIP3-202ENST00000540159 IL18BPO95998 194 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 CYC1P08574 325 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 HOXA1P49639 335 aaPredicted RBP11.61□□□□□ -0.55
BNIP3-202ENST00000540159 AKR1C8PQ5T2L2 129 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 OR8G2PQ6IF36 304 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 PLPPR1Q8TBJ4 325 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 LYRM2Q9NU23 88 aaPredicted RBP11.61□□□□□ -0.55
BNIP3-202ENST00000540159 ZNF391Q9UJN7 358 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 RBFOX3A6NFN3 312 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 B4E171 279 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 WNT9BO14905 357 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 VDAC1P21796 283 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 TSPAN7P41732 249 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 UCP3P55916 312 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 ZNF266Q14584 549 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 SPANXN5Q5MJ07 72 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 PBDC1Q9BVG4 233 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 ARV1Q9H2C2 271 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 RELNP78509 3460 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 TNRC6BQ9UPQ9 1833 aaKnown RBP11.61□□□□□ -0.55
BNIP3-202ENST00000540159 AGFG2O95081 481 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 TNFSF15O95150 251 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 OR2C1O95371 312 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 IGHEP01854 428 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 BMP5P22003 454 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 F2RP25116 425 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 NMSQ5H8A3 153 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 SPSB3Q6PJ21 355 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 LYPD6BQ8NI32 183 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 OR5P3Q8WZ94 311 aa11.61□□□□□ -0.55
BNIP3-202ENST00000540159 KIAA1324LA8MWY0 1029 aaPredicted RBP11.6□□□□□ -0.55
BNIP3-202ENST00000540159 RAB5AP20339 215 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 TAGLN2P37802 199 aaKnown RBP11.6□□□□□ -0.55
BNIP3-202ENST00000540159 ARG2P78540 354 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 WDR86Q86TI4 376 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 CNEP1R1Q8N9A8 125 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 ARFGEF3Q5TH69 2177 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 IGHV3-43A0A0B4J1X8 118 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 KIR2DS1A0A191URI9 304 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 H3BQ15 152 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 YIF1AO95070 293 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 IGHV3-43DP0DP04 118 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 KIR2DS4P43632 304 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 PAX9P55771 341 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 RPL23AP62750 156 aaKnown RBP11.6□□□□□ -0.55
BNIP3-202ENST00000540159 ARL16Q0P5N6 197 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 KIR2DS1Q14954 304 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 CLEC12BQ2HXU8 276 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 TMEM164Q5U3C3 297 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 BTNL3Q6UXE8 466 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 RFESDQ8TAC1 157 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 SPIN2AQ99865 258 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 SPIN2BQ9BPZ2 258 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 ZNF665Q9H7R5 613 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 NIT2Q9NQR4 276 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 TINAGQ9UJW2 476 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 NBASA2RRP1 2371 aa11.6□□□□□ -0.55
BNIP3-202ENST00000540159 DEFB108AA8MXU0 73 aa11.59□□□□□ -0.55
BNIP3-202ENST00000540159 NXPH2O95156 264 aa11.59□□□□□ -0.55
BNIP3-202ENST00000540159 ACP1P24666 158 aa11.59□□□□□ -0.55
BNIP3-202ENST00000540159 RPS23P62266 143 aaKnown RBP11.59□□□□□ -0.55
BNIP3-202ENST00000540159 ZNF816Q0VGE8 651 aaPredicted RBP11.59□□□□□ -0.55
BNIP3-202ENST00000540159 RAB39BQ96DA2 213 aa11.59□□□□□ -0.55
BNIP3-202ENST00000540159 TMEM56Q96MV1 263 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms