RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 FOXJ2Q9P0K8 574 aa14.13□□□□□ -0.15
PCDHA3-201ENST00000522353 CDS2O95674 445 aa14.12□□□□□ -0.15
PCDHA3-201ENST00000522353 NPY1RP25929 384 aa14.12□□□□□ -0.15
PCDHA3-201ENST00000522353 GALR1P47211 349 aa14.12□□□□□ -0.15
PCDHA3-201ENST00000522353 LSM11P83369 360 aaKnown RBP eCLIP14.12□□□□□ -0.15
PCDHA3-201ENST00000522353 ATP1A1-AS1Q5TC04 95 aa14.12□□□□□ -0.15
PCDHA3-201ENST00000522353 ANGPTL6Q8NI99 470 aa14.12□□□□□ -0.15
PCDHA3-201ENST00000522353 ADAP1O75689 374 aa14.12□□□□□ -0.15
PCDHA3-201ENST00000522353 MGAT2Q10469 447 aa14.12□□□□□ -0.15
PCDHA3-201ENST00000522353 ELOVL5Q9NYP7 299 aa14.12□□□□□ -0.15
PCDHA3-201ENST00000522353 IGKV3-7A0A075B6H7 116 aa14.12□□□□□ -0.15
PCDHA3-201ENST00000522353 ORM1P02763 201 aa14.12□□□□□ -0.15
PCDHA3-201ENST00000522353 PGA4P0DJD7 388 aa14.12□□□□□ -0.15
PCDHA3-201ENST00000522353 MPV17P39210 176 aa14.12□□□□□ -0.15
PCDHA3-201ENST00000522353 PPP1R32Q7Z5V6 425 aa14.12□□□□□ -0.15
PCDHA3-201ENST00000522353 C11orf42Q8N5U0 333 aa14.12□□□□□ -0.15
PCDHA3-201ENST00000522353 PTX4Q96A99 478 aa14.12□□□□□ -0.15
PCDHA3-201ENST00000522353 LY75O60449 1722 aa14.12□□□□□ -0.15
PCDHA3-201ENST00000522353 CACNA1EQ15878 2313 aa14.12□□□□□ -0.15
PCDHA3-201ENST00000522353 J3QR06 171 aa14.12□□□□□ -0.15
PCDHA3-201ENST00000522353 NINQ8N4C6 2090 aa14.12□□□□□ -0.15
PCDHA3-201ENST00000522353 LTBRP36941 435 aa14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 PDLIM4P50479 330 aa14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 ANKRD55Q3KP44 614 aa14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 FDCSPQ8NFU4 85 aa14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 SLC2A8Q9NY64 477 aa14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 TRAV8-7A0A075B6U6 113 aa14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 TRAV39A0A0B4J263 110 aa14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 CHST1O43916 411 aa14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 HIST1H1EP10412 219 aaKnown RBP14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 PPP1CCP36873 323 aaKnown RBP14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 INPP5JQ15735 1006 aaPredicted RBP14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 OR8G5Q8NG78 346 aa14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 SNX22Q96L94 193 aa14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 MANBALQ9NQG1 85 aa14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 MIOXQ9UGB7 285 aa14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 A0A1B0GU03 582 aa14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 RGS13O14921 159 aa14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 REG1BP48304 166 aa14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 FGF12P61328 243 aa14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 SLC25A47Q6Q0C1 308 aa14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 MRGPRFQ96AM1 343 aa14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 GPX7Q96SL4 187 aaPredicted RBP14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 PRSS27Q9BQR3 290 aa14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 MRPS18AQ9NVS2 196 aaKnown RBP14.11□□□□□ -0.15
PCDHA3-201ENST00000522353 A0A1W2PNV4 684 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 SYNGR3O43761 229 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 SMPD2O60906 423 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 LOXL3P58215 753 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 FAM78BQ5VT40 261 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 SMIM10L1P0DMW3 83 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 COX5BP10606 129 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 CSRP1P21291 193 aaKnown RBP14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 HTR1DP28221 377 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 IRF3Q14653 427 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 WDR73Q6P4I2 378 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 OR4X1Q8NH49 305 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 SMIM10Q96HG1 83 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 MS4A3Q96HJ5 214 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 RPL13AP40429 203 aaKnown RBP14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 RPL27AP46776 148 aaKnown RBP14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 DYNLT3P51808 116 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 C19orf57Q0VDD7 668 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 PNRC1Q12796 327 aaPredicted RBP14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 CALHM1Q8IU99 346 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 GP6Q9HCN6 339 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 HPRT1P00492 218 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 PMCHP20382 165 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 TMEM37Q8WXS4 190 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 ZNF488Q96MN9 340 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 KCNK17Q96T54 332 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 P2RX4Q99571 388 aa14.1□□□□□ -0.15
PCDHA3-201ENST00000522353 DUXBA0A1W2PPF3 345 aa14.09□□□□□ -0.15
PCDHA3-201ENST00000522353 TCAPO15273 167 aa14.09□□□□□ -0.15
PCDHA3-201ENST00000522353 C10orf111Q8N326 155 aa14.09□□□□□ -0.15
PCDHA3-201ENST00000522353 HILPDAQ9Y5L2 63 aa14.09□□□□□ -0.15
PCDHA3-201ENST00000522353 IGLV3-19P01714 112 aa14.09□□□□□ -0.15
PCDHA3-201ENST00000522353 IL11P20809 199 aa14.09□□□□□ -0.15
PCDHA3-201ENST00000522353 GZMMP51124 257 aa14.09□□□□□ -0.15
PCDHA3-201ENST00000522353 GFRA1P56159 465 aa14.09□□□□□ -0.15
PCDHA3-201ENST00000522353 RPEL1Q2QD12 228 aa14.09□□□□□ -0.15
PCDHA3-201ENST00000522353 NXF2Q9GZY0 626 aaKnown RBP14.09□□□□□ -0.15
PCDHA3-201ENST00000522353 C10orf113Q5VZT2 155 aa14.09□□□□□ -0.15
PCDHA3-201ENST00000522353 B9A039 149 aa14.09□□□□□ -0.15
PCDHA3-201ENST00000522353 HOGA1Q86XE5 327 aa14.09□□□□□ -0.15
PCDHA3-201ENST00000522353 PRSS3P2Q8NHM4 247 aa14.09□□□□□ -0.15
PCDHA3-201ENST00000522353 ZNF552Q9H707 407 aaPredicted RBP14.09□□□□□ -0.15
PCDHA3-201ENST00000522353 PARP11Q9NR21 331 aa14.09□□□□□ -0.15
PCDHA3-201ENST00000522353 KIF13BQ9NQT8 1826 aa14.09□□□□□ -0.15
PCDHA3-201ENST00000522353 CD1AP06126 327 aa14.08□□□□□ -0.15
PCDHA3-201ENST00000522353 G6PCP35575 357 aa14.08□□□□□ -0.15
PCDHA3-201ENST00000522353 STARD4Q96DR4 205 aa14.08□□□□□ -0.15
PCDHA3-201ENST00000522353 LEUTXA8MZ59 168 aa14.08□□□□□ -0.16
PCDHA3-201ENST00000522353 PF4V1P10720 104 aa14.08□□□□□ -0.16
PCDHA3-201ENST00000522353 SEZ6L2Q6UXD5 910 aa14.08□□□□□ -0.16
PCDHA3-201ENST00000522353 C5orf17Q8NAS9 161 aa14.08□□□□□ -0.16
PCDHA3-201ENST00000522353 PKIBQ9C010 78 aa14.08□□□□□ -0.16
PCDHA3-201ENST00000522353 TOLLIPQ9H0E2 274 aa14.08□□□□□ -0.16
PCDHA3-201ENST00000522353 SCO1O75880 301 aa14.08□□□□□ -0.16
PCDHA3-201ENST00000522353 PSG5Q15238 335 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms