RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 TMEM50BP56557 158 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 RPL15P61313 204 aaKnown RBP12.17□□□□□ -0.46
RNF4-210ENST00000508235 LTC4SQ16873 150 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 LRRC75BQ2VPJ9 315 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 HLA-DRB5Q30154 266 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 Q3ZCU0 254 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 C16orf87Q6PH81 154 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 LHFPL4Q7Z7J7 247 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 PHF21AQ96BD5 680 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 DUX5Q96PT3 197 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 C19orf24Q9BVV8 132 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 TAF9BQ9HBM6 251 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 ZNF286AQ9HBT8 521 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 C12orf4Q9NQ89 552 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 DPM3Q9P2X0 92 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 AK3Q9UIJ7 227 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 MXRA5Q9NR99 2828 aa12.17□□□□□ -0.46
RNF4-210ENST00000508235 ANK3Q12955 4377 aaKnown RBP12.16□□□□□ -0.46
RNF4-210ENST00000508235 FAM172BPA6NC97 362 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 VGLL3A8MV65 326 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 LEUTXA8MZ59 168 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 RAB27BO00194 218 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 GABARAPO95166 117 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 IGLV1-47P01700 117 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 IGHV4-59P01825 116 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 HBZP02008 142 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 TFAP2AP05549 437 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 CRYBA1P05813 215 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 SNRPBP14678 240 aaKnown RBP12.16□□□□□ -0.46
RNF4-210ENST00000508235 RCC1P18754 421 aaPredicted RBP12.16□□□□□ -0.46
RNF4-210ENST00000508235 RPS19P39019 145 aaKnown RBP12.16□□□□□ -0.46
RNF4-210ENST00000508235 ACTG1P63261 375 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 PLA2G7Q13093 441 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 SSX2Q16385 188 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 PLAC9Q5JTB6 97 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 BAIAP2L2Q6UXY1 529 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 PRR18Q8N4B5 295 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 C8orf31Q8N9H6 132 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 OR4P4Q8NGL7 312 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 SETD6Q8TBK2 473 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 LGALS14Q8TCE9 139 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 C17orf50Q8WW18 174 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 GALMQ96C23 342 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 AJUBAQ96IF1 538 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 SSX3Q99909 188 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 CMSS1Q9BQ75 279 aaKnown RBP12.16□□□□□ -0.46
RNF4-210ENST00000508235 MMP28Q9H239 520 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 ABCB10Q9NRK6 738 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 SPATA2Q9UM82 520 aa12.16□□□□□ -0.46
RNF4-210ENST00000508235 OOSP1A8MZH6 123 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 BUB1B-PAK6H3BSN5 160 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 J3QR06 171 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 CD3GP09693 182 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 HIST1H1DP16402 221 aaKnown RBP12.15□□□□□ -0.46
RNF4-210ENST00000508235 TGFBR1P36897 503 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 RPL5P46777 297 aaKnown RBP12.15□□□□□ -0.46
RNF4-210ENST00000508235 SERPINB10P48595 397 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 VBP1P61758 197 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 HTD2P86397 168 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 HMGN3Q15651 99 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 GPR107Q5VW38 600 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 CCDC144NLQ6NUI1 221 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 SLC25A46Q96AG3 418 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 KCTD12Q96CX2 325 aaKnown RBP12.15□□□□□ -0.46
RNF4-210ENST00000508235 CHIAQ9BZP6 476 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 TNFRSF19Q9NS68 423 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 RHBDL2Q9NX52 303 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 GFOD1Q9NXC2 390 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 GNG12Q9UBI6 72 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 SCOCQ9UIL1 159 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 JPT1Q9UK76 154 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 VPREB3Q9UKI3 123 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 PSG11Q9UQ72 335 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 HILPDAQ9Y5L2 63 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 ZFHX3Q15911 3703 aa12.15□□□□□ -0.46
RNF4-210ENST00000508235 A0A0A6YYH2 397 aa12.14□□□□□ -0.47
RNF4-210ENST00000508235 A6NJ64 397 aa12.14□□□□□ -0.47
RNF4-210ENST00000508235 H3BUX3 64 aa12.14□□□□□ -0.47
RNF4-210ENST00000508235 MFNGO00587 321 aa12.14□□□□□ -0.47
RNF4-210ENST00000508235 RGS11O94810 467 aa12.14□□□□□ -0.47
RNF4-210ENST00000508235 GNG10P50151 68 aa12.14□□□□□ -0.47
RNF4-210ENST00000508235 DYNLT3P51808 116 aa12.14□□□□□ -0.47
RNF4-210ENST00000508235 LOXL3P58215 753 aa12.14□□□□□ -0.47
RNF4-210ENST00000508235 NCS1P62166 190 aa12.14□□□□□ -0.47
RNF4-210ENST00000508235 MADCAM1Q13477 382 aa12.14□□□□□ -0.47
RNF4-210ENST00000508235 MOGAT2Q3SYC2 334 aa12.14□□□□□ -0.47
RNF4-210ENST00000508235 ZNF880Q6PDB4 577 aa12.14□□□□□ -0.47
RNF4-210ENST00000508235 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.14□□□□□ -0.47
RNF4-210ENST00000508235 OR10X1Q8NGY0 326 aa12.14□□□□□ -0.47
RNF4-210ENST00000508235 OR1L1Q8NH94 360 aa12.14□□□□□ -0.47
RNF4-210ENST00000508235 MDFIQ99750 246 aa12.14□□□□□ -0.47
RNF4-210ENST00000508235 OR2S2Q9NQN1 319 aa12.14□□□□□ -0.47
RNF4-210ENST00000508235 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.14□□□□□ -0.471e-7■■■■■ 28.3
RNF4-210ENST00000508235 A0A075B6Q4 140 aa12.13□□□□□ -0.47
RNF4-210ENST00000508235 GNB3P16520 340 aa12.13□□□□□ -0.47
RNF4-210ENST00000508235 IL3RAP26951 378 aa12.13□□□□□ -0.47
RNF4-210ENST00000508235 BRS3P32247 399 aa12.13□□□□□ -0.47
RNF4-210ENST00000508235 TALDO1P37837 337 aa12.13□□□□□ -0.47
RNF4-210ENST00000508235 MNDAP41218 407 aa12.13□□□□□ -0.47
RNF4-210ENST00000508235 PITPNAQ00169 270 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms