RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 BTN1A1Q13410 526 aa15.37■□□□□ 0.05
COL9A3-205ENST00000466192 SPRNQ5BIV9 151 aa15.37■□□□□ 0.05
COL9A3-205ENST00000466192 LDLRAD3Q86YD5 345 aa15.37■□□□□ 0.05
COL9A3-205ENST00000466192 FAM185AQ8N0U4 392 aa15.37■□□□□ 0.05
COL9A3-205ENST00000466192 OR10Z1Q8NGY1 313 aa15.37■□□□□ 0.05
COL9A3-205ENST00000466192 SLC25A32Q9H2D1 315 aa15.37■□□□□ 0.05
COL9A3-205ENST00000466192 SDHAF2Q9NX18 166 aa15.37■□□□□ 0.05
COL9A3-205ENST00000466192 TRAPPC2LQ9UL33 140 aa15.37■□□□□ 0.05
COL9A3-205ENST00000466192 SMG1Q96Q15 3661 aaKnown RBP15.37■□□□□ 0.05
COL9A3-205ENST00000466192 NDUFA2O43678 99 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 PTBP3O95758 552 aaKnown RBP15.36■□□□□ 0.05
COL9A3-205ENST00000466192 LMO1P25800 156 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 MZT1Q08AG7 82 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 TMEM268Q5VZI3 342 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 SLC35G3Q8N808 338 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 LINC00052Q96N35 136 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 MRPL37Q9BZE1 423 aaKnown RBP15.36■□□□□ 0.05
COL9A3-205ENST00000466192 DNAJB11Q9UBS4 358 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 CACNA1DQ01668 2161 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 H7C1Q1 480 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 DEDDO75618 318 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 THBDP07204 575 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 SNTB1Q13884 538 aaKnown RBP15.36■□□□□ 0.05
COL9A3-205ENST00000466192 SMCO1Q147U7 214 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 WFDC8Q8IUA0 241 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 UBALD1Q8TB05 177 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 LRRC29Q8WV35 223 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 RND1Q92730 232 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 PHYHIPLQ96FC7 376 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 USB1Q9BQ65 265 aaKnown RBP15.36■□□□□ 0.05
COL9A3-205ENST00000466192 CABLES2Q9BTV7 478 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 TMEM222Q9H0R3 208 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 CYTL1Q9NRR1 136 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 PFDN2Q9UHV9 154 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 GLS2Q9UI32 602 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 SESN1Q9Y6P5 492 aa15.36■□□□□ 0.05
COL9A3-205ENST00000466192 PIEZO1Q92508 2521 aa15.35■□□□□ 0.05
COL9A3-205ENST00000466192 TNFSF12O43508 249 aa15.35■□□□□ 0.05
COL9A3-205ENST00000466192 C1QTNF9P0C862 333 aa15.35■□□□□ 0.05
COL9A3-205ENST00000466192 RPS23P62266 143 aaKnown RBP15.35■□□□□ 0.05
COL9A3-205ENST00000466192 TUSC1Q2TAM9 212 aa15.35■□□□□ 0.05
COL9A3-205ENST00000466192 OR52M1Q8NGK5 317 aa15.35■□□□□ 0.05
COL9A3-205ENST00000466192 VKORC1Q9BQB6 163 aa15.35■□□□□ 0.05
COL9A3-205ENST00000466192 TAAR3PQ9P1P4 343 aa15.35■□□□□ 0.05
COL9A3-205ENST00000466192 OR1A1Q9P1Q5 309 aa15.35■□□□□ 0.05
COL9A3-205ENST00000466192 ERRFI1Q9UJM3 462 aaPredicted RBP15.35■□□□□ 0.05
COL9A3-205ENST00000466192 UBE2J1Q9Y385 318 aaPredicted RBP15.35■□□□□ 0.05
COL9A3-205ENST00000466192 OR2W1Q9Y3N9 320 aa15.35■□□□□ 0.05
COL9A3-205ENST00000466192 MBPP02686 304 aaPredicted RBP15.35■□□□□ 0.05
COL9A3-205ENST00000466192 ZNF273Q14593 569 aa15.35■□□□□ 0.05
COL9A3-205ENST00000466192 TMEM108Q6UXF1 575 aa15.35■□□□□ 0.05
COL9A3-205ENST00000466192 MOB1BQ7L9L4 216 aa15.35■□□□□ 0.05
COL9A3-205ENST00000466192 STOML3Q8TAV4 291 aa15.35■□□□□ 0.05
COL9A3-205ENST00000466192 OR2V2Q96R30 315 aa15.35■□□□□ 0.05
COL9A3-205ENST00000466192 MBNL3Q9NUK0 354 aaKnown RBP15.35■□□□□ 0.05
COL9A3-205ENST00000466192 KALRNO60229 2985 aa15.34■□□□□ 0.05
COL9A3-205ENST00000466192 KRBOX1C9JBD0 128 aa15.34■□□□□ 0.05
COL9A3-205ENST00000466192 SPRY3O43610 288 aa15.34■□□□□ 0.05
COL9A3-205ENST00000466192 HKR1P10072 659 aa15.34■□□□□ 0.05
COL9A3-205ENST00000466192 TPT1P13693 172 aaKnown RBP15.34■□□□□ 0.05
COL9A3-205ENST00000466192 EGR1P18146 543 aa15.34■□□□□ 0.05
COL9A3-205ENST00000466192 RND3P61587 244 aa15.34■□□□□ 0.05
COL9A3-205ENST00000466192 KLRB1Q12918 225 aa15.34■□□□□ 0.05
COL9A3-205ENST00000466192 SMIM21Q3B7S5 101 aa15.34■□□□□ 0.05
COL9A3-205ENST00000466192 CMTM1Q8IZ96 169 aa15.34■□□□□ 0.05
COL9A3-205ENST00000466192 H1FOOQ8IZA3 346 aaPredicted RBP15.34■□□□□ 0.05
COL9A3-205ENST00000466192 PRR7Q8TB68 274 aa15.34■□□□□ 0.05
COL9A3-205ENST00000466192 METRNQ9UJH8 293 aa15.34■□□□□ 0.05
COL9A3-205ENST00000466192 WIPI2Q9Y4P8 454 aa15.34■□□□□ 0.05
COL9A3-205ENST00000466192 TRGV8A0A0C4DH27 118 aa15.34■□□□□ 0.05
COL9A3-205ENST00000466192 DPRXA6NFQ7 191 aa15.34■□□□□ 0.05
COL9A3-205ENST00000466192 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.34■□□□□ 0.05
COL9A3-205ENST00000466192 BAP18Q8IXM2 172 aa15.34■□□□□ 0.05
COL9A3-205ENST00000466192 MEGF10Q96KG7 1140 aa15.34■□□□□ 0.05
COL9A3-205ENST00000466192 OR2S2Q9NQN1 319 aa15.34■□□□□ 0.05
COL9A3-205ENST00000466192 TMED3Q9Y3Q3 217 aa15.34■□□□□ 0.05
COL9A3-205ENST00000466192 ROS1P08922 2347 aa15.33■□□□□ 0.05
COL9A3-205ENST00000466192 K7EPK0 472 aa15.33■□□□□ 0.04
COL9A3-205ENST00000466192 PTAFRP25105 342 aa15.33■□□□□ 0.04
COL9A3-205ENST00000466192 RPL12P30050 165 aaKnown RBP15.33■□□□□ 0.04
COL9A3-205ENST00000466192 ZNF695Q8IW36 515 aa15.33■□□□□ 0.04
COL9A3-205ENST00000466192 FAM71E2Q8N5Q1 922 aa15.33■□□□□ 0.04
COL9A3-205ENST00000466192 NUP37Q8NFH4 326 aa15.33■□□□□ 0.04
COL9A3-205ENST00000466192 RELNP78509 3460 aa15.33■□□□□ 0.04
COL9A3-205ENST00000466192 A8MXK9 166 aa15.32■□□□□ 0.04
COL9A3-205ENST00000466192 SRRM5B3KS81 715 aa15.32■□□□□ 0.04
COL9A3-205ENST00000466192 ABCD4O14678 606 aa15.32■□□□□ 0.04
COL9A3-205ENST00000466192 HSPA12AO43301 675 aa15.32■□□□□ 0.04
COL9A3-205ENST00000466192 SRPXP78539 464 aa15.32■□□□□ 0.04
COL9A3-205ENST00000466192 COL10A1Q03692 680 aa15.32■□□□□ 0.04
COL9A3-205ENST00000466192 DSCAMO60469 2012 aa15.32■□□□□ 0.04
COL9A3-205ENST00000466192 NPIPB11E5RHQ5 1161 aa15.32■□□□□ 0.04
COL9A3-205ENST00000466192 IFNL4K9M1U5 179 aa15.32■□□□□ 0.04
COL9A3-205ENST00000466192 ATXN7O15265 892 aaPredicted RBP15.32■□□□□ 0.04
COL9A3-205ENST00000466192 PGLYRP1O75594 196 aaPredicted RBP15.32■□□□□ 0.04
COL9A3-205ENST00000466192 OR3A1P47881 315 aa15.32■□□□□ 0.04
COL9A3-205ENST00000466192 BSPH1Q075Z2 132 aa15.32■□□□□ 0.04
COL9A3-205ENST00000466192 AESQ08117 197 aa15.32■□□□□ 0.04
COL9A3-205ENST00000466192 HMGN3Q15651 99 aa15.32■□□□□ 0.04
COL9A3-205ENST00000466192 MOGAT3Q86VF5 341 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms