RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	PRR18	Q8N4B5	295 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	RFESD	Q8TAC1	157 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	TNFRSF14	Q92956	283 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	KIRREL1	Q96J84	757 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	MS4A7	Q9GZW8	240 aa	Predicted RBP	10.76	□□□□□ -0.69
SF1-206	ENST00000413725	TMEM133	Q9H2Q1	129 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	TAF9B	Q9HBM6	251 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725		Q9N2K0	584 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	BATF3	Q9NR55	127 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	SDCBP	O00560	298 aa	Predicted RBP	10.75	□□□□□ -0.69
SF1-206	ENST00000413725	MMP23A	O75900	390 aa		10.75	□□□□□ -0.69
SF1-206	ENST00000413725	HBZ	P02008	142 aa		10.75	□□□□□ -0.69
SF1-206	ENST00000413725	FCGR3A	P08637	254 aa		10.75	□□□□□ -0.69
SF1-206	ENST00000413725	FAM157C	P0CG43	387 aa		10.75	□□□□□ -0.69
SF1-206	ENST00000413725	EPHA1	P21709	976 aa		10.75	□□□□□ -0.69
SF1-206	ENST00000413725	DTYMK	P23919	212 aa		10.75	□□□□□ -0.69
SF1-206	ENST00000413725	UBE2E1	P51965	193 aa		10.75	□□□□□ -0.69
SF1-206	ENST00000413725	TAS2R20	P59543	309 aa		10.75	□□□□□ -0.69
SF1-206	ENST00000413725	HLA-DRB3	P79483	266 aa		10.75	□□□□□ -0.69
SF1-206	ENST00000413725	PRB3	Q04118	309 aa	Predicted RBP	10.75	□□□□□ -0.69
SF1-206	ENST00000413725	FOXB2	Q5VYV0	432 aa		10.75	□□□□□ -0.69
SF1-206	ENST00000413725	PDZD9	Q8IXQ8	264 aa		10.75	□□□□□ -0.69
SF1-206	ENST00000413725	DTX3	Q8N9I9	347 aa		10.75	□□□□□ -0.69
SF1-206	ENST00000413725	OR52M1	Q8NGK5	317 aa		10.75	□□□□□ -0.69
SF1-206	ENST00000413725	NUDCD2	Q8WVJ2	157 aa		10.75	□□□□□ -0.69
SF1-206	ENST00000413725	GALM	Q96C23	342 aa		10.75	□□□□□ -0.69
SF1-206	ENST00000413725	SUCNR1	Q9BXA5	334 aa		10.75	□□□□□ -0.69
SF1-206	ENST00000413725	CLEC7A	Q9BXN2	247 aa		10.75	□□□□□ -0.69
SF1-206	ENST00000413725	NXF2	Q9GZY0	626 aa	Known RBP	10.75	□□□□□ -0.69
SF1-206	ENST00000413725	MMP27	Q9H306	513 aa		10.75	□□□□□ -0.69
SF1-206	ENST00000413725	AUNIP	Q9H7T9	357 aa		10.75	□□□□□ -0.69
SF1-206	ENST00000413725	EXTL2	Q9UBQ6	330 aa		10.75	□□□□□ -0.69
SF1-206	ENST00000413725	A3GALT2	U3KPV4	340 aa		10.75	□□□□□ -0.69
SF1-206	ENST00000413725		A0A087X0M5	115 aa		10.74	□□□□□ -0.69
SF1-206	ENST00000413725	IGHV2-26	A0A0B4J1V2	119 aa		10.74	□□□□□ -0.69
SF1-206	ENST00000413725		A0A1B0GX30	115 aa		10.74	□□□□□ -0.69
SF1-206	ENST00000413725		A6NHS1	94 aa		10.74	□□□□□ -0.69
SF1-206	ENST00000413725	F2RL2	O00254	374 aa		10.74	□□□□□ -0.69
SF1-206	ENST00000413725	CTDSP2	O14595	271 aa		10.74	□□□□□ -0.69
SF1-206	ENST00000413725	NPFF	O15130	113 aa		10.74	□□□□□ -0.69
SF1-206	ENST00000413725	MELTF	P08582	738 aa		10.74	□□□□□ -0.69
SF1-206	ENST00000413725	GDNF	P39905	211 aa		10.74	□□□□□ -0.69
SF1-206	ENST00000413725	KIR2DS4	P43632	304 aa		10.74	□□□□□ -0.69
SF1-206	ENST00000413725	LGALS4	P56470	323 aa		10.74	□□□□□ -0.69
SF1-206	ENST00000413725	KIR2DS1	Q14954	304 aa		10.74	□□□□□ -0.69
SF1-206	ENST00000413725	SRSF7	Q16629	238 aa	Known RBP eCLIP	10.74	□□□□□ -0.69
SF1-206	ENST00000413725	HCP5	Q6MZN7	132 aa		10.74	□□□□□ -0.69
SF1-206	ENST00000413725	BRD3OS	Q6XYD6	125 aa		10.74	□□□□□ -0.69
SF1-206	ENST00000413725	LAX1	Q8IWV1	398 aa		10.74	□□□□□ -0.69
SF1-206	ENST00000413725	OR1L1	Q8NH94	360 aa		10.74	□□□□□ -0.69
SF1-206	ENST00000413725	UBALD1	Q8TB05	177 aa		10.74	□□□□□ -0.69
SF1-206	ENST00000413725	ZNF286A	Q9HBT8	521 aa		10.74	□□□□□ -0.69
SF1-206	ENST00000413725	GNG12	Q9UBI6	72 aa		10.74	□□□□□ -0.69
SF1-206	ENST00000413725	ELF5	Q9UKW6	265 aa	Predicted RBP	10.74	□□□□□ -0.69
SF1-206	ENST00000413725	MRPS7	Q9Y2R9	242 aa	Known RBP	10.74	□□□□□ -0.69
SF1-206	ENST00000413725	NIPBL	Q6KC79	2804 aa	eCLIP	10.74	□□□□□ -0.69
SF1-206	ENST00000413725	SVEP1	Q4LDE5	3571 aa		10.74	□□□□□ -0.69
SF1-206	ENST00000413725		A0A1W2PRD5	423 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725		A0A1W2PRF3	423 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725		A0A1W2PRM7	423 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	FAM172BP	A6NC97	362 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	TRDC	B7Z8K6	153 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	TOR1A	O14656	332 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	TPPP	O94811	219 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	ARG1	P05089	322 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	CD34	P28906	385 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	S100A5	P33763	92 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	CBX5	P45973	191 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	PRRX1	P54821	245 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	HTD2	P86397	168 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	MIDN	Q504T8	468 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	RUSC1-AS1	Q66K80	236 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	CNIH2	Q6PI25	160 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	BAIAP2L2	Q6UXY1	529 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725		Q6ZPA2	131 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	C9orf139	Q6ZV77	190 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	ABHD12	Q8N2K0	398 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	OR11H6	Q8NGC7	330 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	ZNF596	Q8TC21	504 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	C15orf40	Q8WUR7	153 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	IL1F10	Q8WWZ1	152 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	DIRAS2	Q96HU8	199 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	MIXL1	Q9H2W2	232 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	OR2S2	Q9NQN1	319 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	GFOD1	Q9NXC2	390 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	RABL2A	Q9UBK7	228 aa	Predicted RBP	10.73	□□□□□ -0.69
SF1-206	ENST00000413725	ZNF69	Q9UC07	566 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	JPT1	Q9UK76	154 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	RABL2B	Q9UNT1	228 aa		10.73	□□□□□ -0.69
SF1-206	ENST00000413725	IGHV3-43	A0A0B4J1X8	118 aa		10.72	□□□□□ -0.69
SF1-206	ENST00000413725	MEIOC	A2RUB1	952 aa		10.72	□□□□□ -0.69
SF1-206	ENST00000413725	FABP7	O15540	132 aa		10.72	□□□□□ -0.69
SF1-206	ENST00000413725	RGS11	O94810	467 aa		10.72	□□□□□ -0.69
SF1-206	ENST00000413725	IGHV3-43D	P0DP04	118 aa		10.72	□□□□□ -0.69
SF1-206	ENST00000413725	PRSS3	P35030	304 aa		10.72	□□□□□ -0.69
SF1-206	ENST00000413725	LOXL3	P58215	753 aa		10.72	□□□□□ -0.69
SF1-206	ENST00000413725	STEAP3	Q658P3	488 aa		10.72	□□□□□ -0.69
SF1-206	ENST00000413725	ZNF626	Q68DY1	528 aa		10.72	□□□□□ -0.69
SF1-206	ENST00000413725		Q6ZS49	121 aa		10.72	□□□□□ -0.69
SF1-206	ENST00000413725	SNX29P2	Q8IUI4	249 aa		10.72	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms