RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 PLAC9Q5JTB6 97 aa16.07■□□□□ 0.16
PDLIM2-207ENST00000409417 OR9G1Q8NH87 305 aa16.07■□□□□ 0.16
PDLIM2-207ENST00000409417 NDNFQ8TB73 568 aa16.07■□□□□ 0.16
PDLIM2-207ENST00000409417 CREB3L1Q96BA8 519 aa16.07■□□□□ 0.16
PDLIM2-207ENST00000409417 KCNIP1Q9NZI2 227 aa16.07■□□□□ 0.16
PDLIM2-207ENST00000409417 VGLL3A8MV65 326 aa16.06■□□□□ 0.16
PDLIM2-207ENST00000409417 PAX6P26367 422 aa16.06■□□□□ 0.16
PDLIM2-207ENST00000409417 LOXL3P58215 753 aa16.06■□□□□ 0.16
PDLIM2-207ENST00000409417 LSM3P62310 102 aaKnown RBP16.06■□□□□ 0.16
PDLIM2-207ENST00000409417 ACTG1P63261 375 aa16.06■□□□□ 0.16
PDLIM2-207ENST00000409417 LRRC75BQ2VPJ9 315 aa16.06■□□□□ 0.16
PDLIM2-207ENST00000409417 HLA-DRB5Q30154 266 aa16.06■□□□□ 0.16
PDLIM2-207ENST00000409417 DYNAPQ8N1N2 210 aa16.06■□□□□ 0.16
PDLIM2-207ENST00000409417 RAB3CQ96E17 227 aa16.06■□□□□ 0.16
PDLIM2-207ENST00000409417 SSX3Q99909 188 aa16.06■□□□□ 0.16
PDLIM2-207ENST00000409417 PECRQ9BY49 303 aa16.06■□□□□ 0.16
PDLIM2-207ENST00000409417 TAF9BQ9HBM6 251 aa16.06■□□□□ 0.16
PDLIM2-207ENST00000409417 DPM3Q9P2X0 92 aa16.06■□□□□ 0.16
PDLIM2-207ENST00000409417 PSG11Q9UQ72 335 aa16.06■□□□□ 0.16
PDLIM2-207ENST00000409417 RAB27BO00194 218 aa16.05■□□□□ 0.16
PDLIM2-207ENST00000409417 SDCBPO00560 298 aaPredicted RBP16.05■□□□□ 0.16
PDLIM2-207ENST00000409417 TMEM127O75204 238 aa16.05■□□□□ 0.16
PDLIM2-207ENST00000409417 HBZP02008 142 aa16.05■□□□□ 0.16
PDLIM2-207ENST00000409417 SNRPBP14678 240 aaKnown RBP16.05■□□□□ 0.16
PDLIM2-207ENST00000409417 TGFBR1P36897 503 aa16.05■□□□□ 0.16
PDLIM2-207ENST00000409417 SCAND1P57086 179 aa16.05■□□□□ 0.16
PDLIM2-207ENST00000409417 TMEM30BQ3MIR4 351 aa16.05■□□□□ 0.16
PDLIM2-207ENST00000409417 OR10R2Q8NGX6 335 aa16.05■□□□□ 0.16
PDLIM2-207ENST00000409417 UBALD1Q8TB05 177 aa16.05■□□□□ 0.16
PDLIM2-207ENST00000409417 LEAP2Q969E1 77 aa16.05■□□□□ 0.16
PDLIM2-207ENST00000409417 MMP28Q9H239 520 aa16.05■□□□□ 0.16
PDLIM2-207ENST00000409417 AK3Q9UIJ7 227 aa16.05■□□□□ 0.16
PDLIM2-207ENST00000409417 VPREB3Q9UKI3 123 aa16.05■□□□□ 0.16
PDLIM2-207ENST00000409417 HILPDAQ9Y5L2 63 aa16.05■□□□□ 0.16
PDLIM2-207ENST00000409417 TRBV6-6A0A0A6YYG2 114 aa16.04■□□□□ 0.16
PDLIM2-207ENST00000409417 FAM181BA6NEQ2 426 aa16.04■□□□□ 0.16
PDLIM2-207ENST00000409417 POM121CA8CG34 1229 aa16.04■□□□□ 0.16
PDLIM2-207ENST00000409417 LEUTXA8MZ59 168 aa16.04■□□□□ 0.16
PDLIM2-207ENST00000409417 BUB1B-PAK6H3BSN5 160 aa16.04■□□□□ 0.16
PDLIM2-207ENST00000409417 J3QR06 171 aa16.04■□□□□ 0.16
PDLIM2-207ENST00000409417 IGHV3-7P01780 117 aa16.04■□□□□ 0.16
PDLIM2-207ENST00000409417 MOGAT2Q3SYC2 334 aa16.04■□□□□ 0.16
PDLIM2-207ENST00000409417 IDNKQ5T6J7 187 aa16.04■□□□□ 0.16
PDLIM2-207ENST00000409417 MOB1BQ7L9L4 216 aa16.04■□□□□ 0.16
PDLIM2-207ENST00000409417 CROCCP3Q8IVE0 287 aa16.04■□□□□ 0.16
PDLIM2-207ENST00000409417 OR1L1Q8NH94 360 aa16.04■□□□□ 0.16
PDLIM2-207ENST00000409417 SPATA3Q8NHX4 192 aa16.04■□□□□ 0.16
PDLIM2-207ENST00000409417 LGALS14Q8TCE9 139 aa16.04■□□□□ 0.16
PDLIM2-207ENST00000409417 GCDHQ92947 438 aaPredicted RBP16.04■□□□□ 0.16
PDLIM2-207ENST00000409417 CHMP1AQ9HD42 196 aaPredicted RBP16.04■□□□□ 0.16
PDLIM2-207ENST00000409417 C12orf4Q9NQ89 552 aa16.04■□□□□ 0.16
PDLIM2-207ENST00000409417 GFOD1Q9NXC2 390 aa16.04■□□□□ 0.16
PDLIM2-207ENST00000409417 KCNK7Q9Y2U2 307 aa16.04■□□□□ 0.16
PDLIM2-207ENST00000409417 H3BUX3 64 aa16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 TFAP2AP05549 437 aa16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 RPS19P39019 145 aaKnown RBP16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 CEACAM3P40198 252 aa16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 ALDH3B2P48448 385 aa16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 RPL15P61313 204 aaKnown RBP16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 ZNF880Q6PDB4 577 aa16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 PRR18Q8N4B5 295 aa16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 C8orf31Q8N9H6 132 aa16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 ATG5Q9H1Y0 275 aa16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 ETV7Q9Y603 341 aa16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 TMEM89A2RUT3 159 aa16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 LY6LH3BQJ8 138 aa16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 GPR137BO60478 399 aa16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 HKR1P10072 659 aa16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 DYNLT3P51808 116 aa16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 Q3ZCU0 254 aa16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 Q6ZPA2 131 aa16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 ANKRD13BQ86YJ7 626 aa16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 PIFOQ8TCI5 191 aa16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 CMSS1Q9BQ75 279 aaKnown RBP16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 HDHD3Q9BSH5 251 aaPredicted RBP16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 GNG12Q9UBI6 72 aa16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 AMMECR1Q9Y4X0 333 aaPredicted RBP16.03■□□□□ 0.16
PDLIM2-207ENST00000409417 TENM1Q9UKZ4 2725 aa16.02■□□□□ 0.16
PDLIM2-207ENST00000409417 SCGNO76038 276 aa16.02■□□□□ 0.15
PDLIM2-207ENST00000409417 HIST1H1DP16402 221 aaKnown RBP16.02■□□□□ 0.15
PDLIM2-207ENST00000409417 NCS1P62166 190 aa16.02■□□□□ 0.15
PDLIM2-207ENST00000409417 HMGN3Q15651 99 aa16.02■□□□□ 0.15
PDLIM2-207ENST00000409417 PLA1AQ53H76 456 aa16.02■□□□□ 0.15
PDLIM2-207ENST00000409417 OLFML2AQ68BL7 652 aa16.02■□□□□ 0.15
PDLIM2-207ENST00000409417 OR2S2Q9NQN1 319 aa16.02■□□□□ 0.15
PDLIM2-207ENST00000409417 ABRACLQ9P1F3 81 aa16.02■□□□□ 0.15
PDLIM2-207ENST00000409417 MGAT4AQ9UM21 535 aa16.02■□□□□ 0.15
PDLIM2-207ENST00000409417 IGHV3-43A0A0B4J1X8 118 aa16.01■□□□□ 0.15
PDLIM2-207ENST00000409417 SERPINE3A8MV23 424 aa16.01■□□□□ 0.15
PDLIM2-207ENST00000409417 OOSP1A8MZH6 123 aa16.01■□□□□ 0.15
PDLIM2-207ENST00000409417 MFNGO00587 321 aa16.01■□□□□ 0.15
PDLIM2-207ENST00000409417 CRYBA1P05813 215 aa16.01■□□□□ 0.15
PDLIM2-207ENST00000409417 IGHV3-43DP0DP04 118 aa16.01■□□□□ 0.15
PDLIM2-207ENST00000409417 GNB3P16520 340 aa16.01■□□□□ 0.15
PDLIM2-207ENST00000409417 GNG10P50151 68 aa16.01■□□□□ 0.15
PDLIM2-207ENST00000409417 VBP1P61758 197 aa16.01■□□□□ 0.15
PDLIM2-207ENST00000409417 HTD2P86397 168 aa16.01■□□□□ 0.15
PDLIM2-207ENST00000409417 ARL6IP1Q15041 203 aa16.01■□□□□ 0.15
PDLIM2-207ENST00000409417 STEAP3Q658P3 488 aa16.01■□□□□ 0.15
PDLIM2-207ENST00000409417 FAM53AQ6NSI3 398 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms