RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 HEXAP06865 529 aa15.9■□□□□ 0.14
USP39-202ENST00000409025 OR4A8P0C604 315 aa15.9■□□□□ 0.14
USP39-202ENST00000409025 TESK1Q15569 626 aa15.9■□□□□ 0.14
USP39-202ENST00000409025 ADIPOQQ15848 244 aa15.9■□□□□ 0.14
USP39-202ENST00000409025 C6orf183Q5T699 404 aa15.9■□□□□ 0.14
USP39-202ENST00000409025 TMEM268Q5VZI3 342 aa15.9■□□□□ 0.14
USP39-202ENST00000409025 BVESQ8NE79 360 aa15.9■□□□□ 0.14
USP39-202ENST00000409025 PPP1R35Q8TAP8 253 aa15.9■□□□□ 0.14
USP39-202ENST00000409025 GALMQ96C23 342 aa15.9■□□□□ 0.14
USP39-202ENST00000409025 SHARPINQ9H0F6 387 aa15.9■□□□□ 0.14
USP39-202ENST00000409025 OR5AC2Q9NZP5 309 aa15.9■□□□□ 0.14
USP39-202ENST00000409025 TMED3Q9Y3Q3 217 aa15.9■□□□□ 0.14
USP39-202ENST00000409025 C12orf77C9JDV5 145 aa15.89■□□□□ 0.13
USP39-202ENST00000409025 ERVH48-1M5A8F1 160 aa15.89■□□□□ 0.13
USP39-202ENST00000409025 PGLYRP1O75594 196 aaPredicted RBP15.89■□□□□ 0.13
USP39-202ENST00000409025 B3GALNT1O75752 331 aa15.89■□□□□ 0.13
USP39-202ENST00000409025 SFTPCP11686 197 aa15.89■□□□□ 0.13
USP39-202ENST00000409025 CEACAM6P40199 344 aa15.89■□□□□ 0.13
USP39-202ENST00000409025 UBA52P62987 128 aaKnown RBP15.89■□□□□ 0.13
USP39-202ENST00000409025 PAX5Q02548 391 aa15.89■□□□□ 0.13
USP39-202ENST00000409025 ZNF695Q8IW36 515 aa15.89■□□□□ 0.13
USP39-202ENST00000409025 LHFPL5Q8TAF8 219 aa15.89■□□□□ 0.13
USP39-202ENST00000409025 ERGIC1Q969X5 290 aa15.89■□□□□ 0.13
USP39-202ENST00000409025 TMEM56Q96MV1 263 aa15.89■□□□□ 0.13
USP39-202ENST00000409025 CNTNAP3BQ96NU0 1288 aa15.89■□□□□ 0.13
USP39-202ENST00000409025 DIRC2Q96SL1 478 aa15.89■□□□□ 0.13
USP39-202ENST00000409025 CNTNAP3Q9BZ76 1288 aa15.89■□□□□ 0.13
USP39-202ENST00000409025 PRORYQ9H606 182 aa15.89■□□□□ 0.13
USP39-202ENST00000409025 ESRP2Q9H6T0 727 aaKnown RBP15.89■□□□□ 0.13
USP39-202ENST00000409025 GCM1Q9NP62 436 aa15.89■□□□□ 0.13
USP39-202ENST00000409025 RNF7Q9UBF6 113 aa15.89■□□□□ 0.13
USP39-202ENST00000409025 RBM7Q9Y580 266 aaKnown RBP15.89■□□□□ 0.13
USP39-202ENST00000409025 TMEM56-RWDD3S4R434 201 aa15.89■□□□□ 0.13
USP39-202ENST00000409025 IGHV3OR15-7A0A075B7D8 119 aa15.88■□□□□ 0.13
USP39-202ENST00000409025 ATXN7O15265 892 aaPredicted RBP15.88■□□□□ 0.13
USP39-202ENST00000409025 ZNF737O75373 536 aa15.88■□□□□ 0.13
USP39-202ENST00000409025 CHRNB4P30926 498 aa15.88■□□□□ 0.13
USP39-202ENST00000409025 IL2RGP31785 369 aa15.88■□□□□ 0.13
USP39-202ENST00000409025 GLIPR1P48060 266 aa15.88■□□□□ 0.13
USP39-202ENST00000409025 SMCO1Q147U7 214 aa15.88■□□□□ 0.13
USP39-202ENST00000409025 CLLU1Q5K131 121 aa15.88■□□□□ 0.13
USP39-202ENST00000409025 ADAM5Q6NVV9 412 aa15.88■□□□□ 0.13
USP39-202ENST00000409025 SLC35G3Q8N808 338 aa15.88■□□□□ 0.13
USP39-202ENST00000409025 OR1L1Q8NH94 360 aa15.88■□□□□ 0.13
USP39-202ENST00000409025 SNX22Q96L94 193 aa15.88■□□□□ 0.13
USP39-202ENST00000409025 TNFSF12O43508 249 aa15.88■□□□□ 0.13
USP39-202ENST00000409025 RLN2P04090 185 aa15.88■□□□□ 0.13
USP39-202ENST00000409025 FOXRED2Q8IWF2 684 aa15.88■□□□□ 0.13
USP39-202ENST00000409025 OR1S1Q8NH92 325 aa15.88■□□□□ 0.13
USP39-202ENST00000409025 MRGPRDQ8TDS7 321 aa15.88■□□□□ 0.13
USP39-202ENST00000409025 AKR1E2Q96JD6 320 aa15.88■□□□□ 0.13
USP39-202ENST00000409025 LURAP1Q96LR2 239 aa15.88■□□□□ 0.13
USP39-202ENST00000409025 ARPC5LQ9BPX5 153 aa15.88■□□□□ 0.13
USP39-202ENST00000409025 GSX2Q9BZM3 304 aa15.88■□□□□ 0.13
USP39-202ENST00000409025 TUBAL3A6NHL2 446 aa15.87■□□□□ 0.13
USP39-202ENST00000409025 H0Y980 276 aa15.87■□□□□ 0.13
USP39-202ENST00000409025 KCNAB3O43448 404 aa15.87■□□□□ 0.13
USP39-202ENST00000409025 SPDEFO95238 335 aa15.87■□□□□ 0.13
USP39-202ENST00000409025 HBZP02008 142 aa15.87■□□□□ 0.13
USP39-202ENST00000409025 UCP1P25874 307 aa15.87■□□□□ 0.13
USP39-202ENST00000409025 ESCO2Q56NI9 601 aa15.87■□□□□ 0.13
USP39-202ENST00000409025 TRAT1Q6PIZ9 186 aa15.87■□□□□ 0.13
USP39-202ENST00000409025 SCARB1Q8WTV0 552 aa15.87■□□□□ 0.13
USP39-202ENST00000409025 GPHA2Q96T91 129 aa15.87■□□□□ 0.13
USP39-202ENST00000409025 COQ3Q9NZJ6 369 aa15.87■□□□□ 0.13
USP39-202ENST00000409025 FAM90A27PA6NNH2 459 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 CDS2O95674 445 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 SCGB1D2O95969 90 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 ADH4P08319 380 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 F2RP25116 425 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 CD80P33681 288 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 FBXL19-AS1Q494R0 122 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 NCMAPQ5T1S8 102 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 ALKAL2Q6UX46 152 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 FAM219AQ8IW50 185 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 SELENOHQ8IZQ5 122 aaKnown RBP15.86■□□□□ 0.13
USP39-202ENST00000409025 TPRX1Q8N7U7 411 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 Q8TCH9 128 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 ST8SIA2Q92186 375 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 RRNAD1Q96FB5 475 aaKnown RBP15.86■□□□□ 0.13
USP39-202ENST00000409025 ZNF471Q9BX82 626 aaPredicted RBP15.86■□□□□ 0.13
USP39-202ENST00000409025 ZFP57Q9NU63 452 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 TLN1Q9Y490 2541 aaKnown RBP15.86■□□□□ 0.13
USP39-202ENST00000409025 DUXBA0A1W2PPF3 345 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 RPS10-NUDT3A0A1W2PQS6 291 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 MGST3O14880 152 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 OR8U9P0C7N5 309 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 IRF2P14316 349 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 EDDM3AQ14507 147 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 OR5D13Q8NGL4 314 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 OR13A1Q8NGR1 328 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 OR8U1Q8NH10 309 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 FAM222BQ8WU58 562 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 NINJ1Q92982 152 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 RNASE6Q93091 150 aaKnown RBP15.86■□□□□ 0.13
USP39-202ENST00000409025 AQP10Q96PS8 301 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 KCNS2Q9ULS6 477 aa15.86■□□□□ 0.13
USP39-202ENST00000409025 LSM5Q9Y4Y9 91 aaKnown RBP15.86■□□□□ 0.13
USP39-202ENST00000409025 LINC00862A6NCI5 91 aa15.85■□□□□ 0.13
USP39-202ENST00000409025 C17orf100A8MU93 164 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms