RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 ZDHHC16Q969W1 377 aa12.84□□□□□ -0.35
GDPD3-202ENST00000406256 C19orf24Q9BVV8 132 aa12.84□□□□□ -0.35
GDPD3-202ENST00000406256 CHIAQ9BZP6 476 aa12.84□□□□□ -0.35
GDPD3-202ENST00000406256 PLEKHJ1Q9NW61 149 aa12.84□□□□□ -0.35
GDPD3-202ENST00000406256 PSG11Q9UQ72 335 aa12.84□□□□□ -0.35
GDPD3-202ENST00000406256 LY6LH3BQJ8 138 aa12.83□□□□□ -0.36
GDPD3-202ENST00000406256 IGHV3-7P01780 117 aa12.83□□□□□ -0.36
GDPD3-202ENST00000406256 HBZP02008 142 aa12.83□□□□□ -0.36
GDPD3-202ENST00000406256 NFYBP25208 207 aa12.83□□□□□ -0.36
GDPD3-202ENST00000406256 LTC4SQ16873 150 aa12.83□□□□□ -0.36
GDPD3-202ENST00000406256 HLA-DRB5Q30154 266 aa12.83□□□□□ -0.36
GDPD3-202ENST00000406256 Q6ZTK2 550 aa12.83□□□□□ -0.36
GDPD3-202ENST00000406256 ZNF439Q8NDP4 499 aa12.83□□□□□ -0.36
GDPD3-202ENST00000406256 OR52M1Q8NGK5 317 aa12.83□□□□□ -0.36
GDPD3-202ENST00000406256 OR10R2Q8NGX6 335 aa12.83□□□□□ -0.36
GDPD3-202ENST00000406256 ZNF596Q8TC21 504 aa12.83□□□□□ -0.36
GDPD3-202ENST00000406256 SSMEM1Q8WWF3 244 aa12.83□□□□□ -0.36
GDPD3-202ENST00000406256 ZMAT3Q9HA38 289 aaKnown RBP12.83□□□□□ -0.36
GDPD3-202ENST00000406256 TAF9BQ9HBM6 251 aa12.83□□□□□ -0.36
GDPD3-202ENST00000406256 GFOD1Q9NXC2 390 aa12.83□□□□□ -0.36
GDPD3-202ENST00000406256 TRAPPC2LQ9UL33 140 aa12.83□□□□□ -0.36
GDPD3-202ENST00000406256 FAM96BQ9Y3D0 163 aa12.83□□□□□ -0.36
GDPD3-202ENST00000406256 POMT1Q9Y6A1 747 aa12.83□□□□□ -0.36
GDPD3-202ENST00000406256 CMYA5Q8N3K9 4069 aa12.83□□□□□ -0.36
GDPD3-202ENST00000406256 IGHV3-43A0A0B4J1X8 118 aa12.82□□□□□ -0.36
GDPD3-202ENST00000406256 RNF212BA8MTL3 300 aa12.82□□□□□ -0.36
GDPD3-202ENST00000406256 VGLL3A8MV65 326 aa12.82□□□□□ -0.36
GDPD3-202ENST00000406256 TRIM77I1YAP6 450 aa12.82□□□□□ -0.36
GDPD3-202ENST00000406256 IGHV3-43DP0DP04 118 aa12.82□□□□□ -0.36
GDPD3-202ENST00000406256 RANBP1P43487 201 aa12.82□□□□□ -0.36
GDPD3-202ENST00000406256 SCAND1P57086 179 aa12.82□□□□□ -0.36
GDPD3-202ENST00000406256 DYNC1I2Q13409 638 aaKnown RBP12.82□□□□□ -0.36
GDPD3-202ENST00000406256 C6orf183Q5T699 404 aa12.82□□□□□ -0.36
GDPD3-202ENST00000406256 IDNKQ5T6J7 187 aa12.82□□□□□ -0.36
GDPD3-202ENST00000406256 MINOS1Q5TGZ0 78 aa12.82□□□□□ -0.36
GDPD3-202ENST00000406256 ZNF554Q86TJ5 538 aa12.82□□□□□ -0.36
GDPD3-202ENST00000406256 OR9G1Q8NH87 305 aa12.82□□□□□ -0.36
GDPD3-202ENST00000406256 TMEM158Q8WZ71 300 aa12.82□□□□□ -0.36
GDPD3-202ENST00000406256 ELF5Q9UKW6 265 aaPredicted RBP12.82□□□□□ -0.36
GDPD3-202ENST00000406256 MINOS1-NBL1R4GNA1 71 aa12.82□□□□□ -0.36
GDPD3-202ENST00000406256 J3QR06 171 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 HIST1H1DP16402 221 aaKnown RBP12.81□□□□□ -0.36
GDPD3-202ENST00000406256 GNB3P16520 340 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 LGALS4P56470 323 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 AANATQ16613 207 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 FBLN7Q53RD9 439 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 GPR107Q5VW38 600 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 SLC25A46Q96AG3 418 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 RAB3CQ96E17 227 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 MALSU1Q96EH3 234 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 MMP28Q9H239 520 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.81□□□□□ -0.36
GDPD3-202ENST00000406256 TNFRSF19Q9NS68 423 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 RHBDL2Q9NX52 303 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 A0A1W2PPE3 182 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 BUB1B-PAK6H3BSN5 160 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 SDCBPO00560 298 aaPredicted RBP12.81□□□□□ -0.36
GDPD3-202ENST00000406256 SLC31A2O15432 143 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 SERPINB10P48595 397 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 ZNF134P52741 427 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 DIAPH2-AS1Q14236 149 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 GNMTQ14749 295 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 SSX2Q16385 188 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 LRRC75BQ2VPJ9 315 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 TRAT1Q6PIZ9 186 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 LINC00311Q8N616 119 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 NDNFQ8TB73 568 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 SSX3Q99909 188 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 Q9N2K0 584 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 VPREB3Q9UKI3 123 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 ETV7Q9Y603 341 aa12.81□□□□□ -0.36
GDPD3-202ENST00000406256 H3BUX3 64 aa12.8□□□□□ -0.36
GDPD3-202ENST00000406256 TMEM127O75204 238 aa12.8□□□□□ -0.36
GDPD3-202ENST00000406256 HTR1DP28221 377 aa12.8□□□□□ -0.36
GDPD3-202ENST00000406256 GNG10P50151 68 aa12.8□□□□□ -0.36
GDPD3-202ENST00000406256 RELBQ01201 579 aa12.8□□□□□ -0.36
GDPD3-202ENST00000406256 PLA1AQ53H76 456 aa12.8□□□□□ -0.36
GDPD3-202ENST00000406256 C16orf87Q6PH81 154 aa12.8□□□□□ -0.36
GDPD3-202ENST00000406256 GPR141Q7Z602 305 aa12.8□□□□□ -0.36
GDPD3-202ENST00000406256 PRR18Q8N4B5 295 aa12.8□□□□□ -0.36
GDPD3-202ENST00000406256 C8orf31Q8N9H6 132 aa12.8□□□□□ -0.36
GDPD3-202ENST00000406256 CMSS1Q9BQ75 279 aaKnown RBP12.8□□□□□ -0.36
GDPD3-202ENST00000406256 ATG5Q9H1Y0 275 aa12.8□□□□□ -0.36
GDPD3-202ENST00000406256 C12orf4Q9NQ89 552 aa12.8□□□□□ -0.36
GDPD3-202ENST00000406256 DPM3Q9P2X0 92 aa12.8□□□□□ -0.36
GDPD3-202ENST00000406256 SPATA2Q9UM82 520 aa12.8□□□□□ -0.36
GDPD3-202ENST00000406256 HILPDAQ9Y5L2 63 aa12.8□□□□□ -0.36
GDPD3-202ENST00000406256 TRRAPQ9Y4A5 3859 aa12.8□□□□□ -0.36
GDPD3-202ENST00000406256 IGKV1-6A0A0C4DH72 117 aa12.79□□□□□ -0.36
GDPD3-202ENST00000406256 TMEM89A2RUT3 159 aa12.79□□□□□ -0.36
GDPD3-202ENST00000406256 METTL21EPA6NDL7 271 aa12.79□□□□□ -0.36
GDPD3-202ENST00000406256 FAM181BA6NEQ2 426 aa12.79□□□□□ -0.36
GDPD3-202ENST00000406256 SPINT2O43291 252 aa12.79□□□□□ -0.36
GDPD3-202ENST00000406256 GPR137BO60478 399 aa12.79□□□□□ -0.36
GDPD3-202ENST00000406256 RPL5P46777 297 aaKnown RBP12.79□□□□□ -0.36
GDPD3-202ENST00000406256 RAB13P51153 203 aa12.79□□□□□ -0.36
GDPD3-202ENST00000406256 DYNLT3P51808 116 aa12.79□□□□□ -0.36
GDPD3-202ENST00000406256 TMEM30BQ3MIR4 351 aa12.79□□□□□ -0.36
GDPD3-202ENST00000406256 ZNF260Q3ZCT1 412 aa12.79□□□□□ -0.36
GDPD3-202ENST00000406256 Q3ZCU0 254 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms