RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 EMC9Q9Y3B6 208 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 FBXO7Q9Y3I1 522 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 R4GN57 208 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 TANC2Q9HCD6 1990 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 UNC13CQ8NB66 2214 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 H7C1C5 153 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 HSPA12AO43301 675 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 MPZL1O95297 269 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 GCGP01275 180 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 OR5H8P0DN80 308 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 P2RY1P47900 373 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 FHITP49789 147 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 MEOX1P50221 254 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 RND2P52198 227 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 LCN6P62502 163 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 HTD2P86397 168 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 SLC9A3R2Q15599 337 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 GABRA6Q16445 453 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 CSNK2A3Q8NEV1 391 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 OR8G5Q8NG78 346 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 OR1K1Q8NGR3 316 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 OR13C3Q8NGS6 347 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 ERGIC1Q969X5 290 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 PERPQ96FX8 193 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 Q96M66 194 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 LPAR5Q9H1C0 372 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 PLEKHA2Q9HB19 425 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 CDH20Q9HBT6 801 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 ZNF319Q9P2F9 582 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 CGGBP1Q9UFW8 167 aaPredicted RBP4.59□□□□□ -1.67
VPS41-203ENST00000395969 MEMO1Q9Y316 297 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 PPIAL4AQ9Y536 164 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 PRUNE2Q8WUY3 3088 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 A0A1W2PNR3 127 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 K7N7A8 449 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 GEMIN2O14893 280 aaKnown RBP4.59□□□□□ -1.68
VPS41-203ENST00000395969 IGKV3-15P01624 115 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 AMBPP02760 352 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 IFNA6P05013 189 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 VSIG8P0DPA2 414 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 OTX2P32243 289 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 DNASE1L1P49184 302 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 S100A10P60903 97 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 DLK1P80370 383 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 OR5I1Q13606 314 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 ZNF766Q5HY98 468 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 COA6Q5JTJ3 125 aaKnown RBP4.59□□□□□ -1.68
VPS41-203ENST00000395969 RAET1LQ5VY80 246 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 INO80CQ6PI98 192 aaPredicted RBP4.59□□□□□ -1.68
VPS41-203ENST00000395969 FAM180AQ6UWF9 173 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 AAED1Q7RTV5 226 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 OR4D6Q8NGJ1 314 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 RARRES2Q99969 163 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 ULBP2Q9BZM5 246 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 HES4Q9HCC6 221 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 TMEM242Q9NWH2 141 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 GSKIPQ9P0R6 139 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 SPRR3Q9UBC9 169 aa4.59□□□□□ -1.68
VPS41-203ENST00000395969 M0R143 59 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 ADH4P08319 380 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 SRP19P09132 144 aaKnown RBP4.58□□□□□ -1.68
VPS41-203ENST00000395969 OR5AC1P0C628 307 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 CEACAM8P31997 349 aaPredicted RBP4.58□□□□□ -1.68
VPS41-203ENST00000395969 PPP1CCP36873 323 aaKnown RBP4.58□□□□□ -1.68
VPS41-203ENST00000395969 FUT6P51993 359 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 PSG4Q00888 419 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 IL13RA2Q14627 380 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 HAGHQ16775 308 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 CR1LQ2VPA4 569 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 AADACL3Q5VUY0 350 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 MBNL2Q5VZF2 373 aaKnown RBP4.58□□□□□ -1.68
VPS41-203ENST00000395969 OTPQ5XKR4 325 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 FBXW9Q5XUX1 488 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 BTNL3Q6UXE8 466 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 ERASQ7Z444 233 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 SLC35E3Q7Z769 313 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 FAM90A1Q86YD7 464 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 LRTM2Q8N967 370 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 OR13C9Q8NGT0 318 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 OR4K15Q8NH41 348 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 OR14L1PQ8NHC6 308 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 RNASE8Q8TDE3 154 aaKnown RBP4.58□□□□□ -1.68
VPS41-203ENST00000395969 FAM46BQ96A09 425 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 CMBLQ96DG6 245 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 SYT3Q9BQG1 590 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 PLK3Q9H4B4 646 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 METTL8Q9H825 291 aaKnown RBP4.58□□□□□ -1.68
VPS41-203ENST00000395969 WFDC1Q9HC57 220 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 RPH3ALQ9UNE2 315 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 MPC1Q9Y5U8 109 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 RBFOX3A6NFN3 312 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 TMEM210A6NLX4 147 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 B4DEV8 164 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 M0R135 149 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 SIAH2O43255 324 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 CDC14BO60729 498 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 WDR1O75083 606 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 SYNGR4O95473 234 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 SELEP16581 610 aa4.58□□□□□ -1.68
VPS41-203ENST00000395969 KITLGP21583 273 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms