RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 LYL1P12980 280 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 HERV-K104P61576 105 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 TMUB2Q71RG4 321 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 SLC7A5P1Q8MH63 180 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 OR8H1Q8NGG4 311 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 PLPPR1Q8TBJ4 325 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 RTN4IP1Q8WWV3 396 aaPredicted RBP12.66□□□□□ -0.38
SCAF11-204ENST00000395454 TOMM40LQ969M1 308 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 SEC22AQ96IW7 307 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 SUCNR1Q9BXA5 334 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 DYNLRB1Q9NP97 96 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 UNC79Q9P2D8 2635 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 C3orf80F5H4A9 247 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 IFNL4K9M1U5 179 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 TSC22D2O75157 780 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 ADAP1O75689 374 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 PSMB6P28072 239 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 RBMXP38159 391 aaKnown RBP12.66□□□□□ -0.38
SCAF11-204ENST00000395454 TMEM187Q14656 261 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 MST1LQ2TV78 715 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 ZNF546Q86UE3 836 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 FAM90A1Q86YD7 464 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 CCDC71LQ8N9Z2 235 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 MFFQ9GZY8 342 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 CBLN4Q9NTU7 201 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 A0A0D9SG52 128 aa12.65□□□□□ -0.38
SCAF11-204ENST00000395454 ZSCAN5BA6NJL1 495 aa12.65□□□□□ -0.38
SCAF11-204ENST00000395454 OR2F2O95006 317 aa12.65□□□□□ -0.38
SCAF11-204ENST00000395454 IFNA7P01567 189 aa12.65□□□□□ -0.38
SCAF11-204ENST00000395454 WNT2P09544 360 aa12.65□□□□□ -0.38
SCAF11-204ENST00000395454 GNRHRP30968 328 aa12.65□□□□□ -0.38
SCAF11-204ENST00000395454 FXYD4P59646 89 aa12.65□□□□□ -0.38
SCAF11-204ENST00000395454 OR2F1Q13607 317 aa12.65□□□□□ -0.38
SCAF11-204ENST00000395454 SWI5Q1ZZU3 235 aa12.65□□□□□ -0.38
SCAF11-204ENST00000395454 ABCA11PQ4W5N1 156 aa12.65□□□□□ -0.38
SCAF11-204ENST00000395454 PRAMEF6Q5VXH4 476 aa12.65□□□□□ -0.38
SCAF11-204ENST00000395454 ZNF826PQ6ZT77 177 aa12.65□□□□□ -0.38
SCAF11-204ENST00000395454 H1FOOQ8IZA3 346 aaPredicted RBP12.65□□□□□ -0.38
SCAF11-204ENST00000395454 ZCCHC24Q8N2G6 241 aaKnown RBP12.65□□□□□ -0.38
SCAF11-204ENST00000395454 KCNRGQ8N5I3 272 aa12.65□□□□□ -0.38
SCAF11-204ENST00000395454 NRGNQ92686 78 aa12.65□□□□□ -0.38
SCAF11-204ENST00000395454 C2orf50Q96LR7 162 aa12.65□□□□□ -0.38
SCAF11-204ENST00000395454 KCNIP3Q9Y2W7 256 aa12.65□□□□□ -0.38
SCAF11-204ENST00000395454 USF3Q68DE3 2245 aa12.65□□□□□ -0.38
SCAF11-204ENST00000395454 POLQO75417 2590 aa12.65□□□□□ -0.39
SCAF11-204ENST00000395454 TEX13DA0A0J9YY54 714 aaPredicted RBP12.64□□□□□ -0.39
SCAF11-204ENST00000395454 RNF222A6NCQ9 220 aa12.64□□□□□ -0.39
SCAF11-204ENST00000395454 C5orf51A6NDU8 294 aa12.64□□□□□ -0.39
SCAF11-204ENST00000395454 SIRPB1O00241 398 aa12.64□□□□□ -0.39
SCAF11-204ENST00000395454 RCC1P18754 421 aaPredicted RBP12.64□□□□□ -0.39
SCAF11-204ENST00000395454 GATA4P43694 442 aa12.64□□□□□ -0.39
SCAF11-204ENST00000395454 KRTAP10-9P60411 292 aa12.64□□□□□ -0.39
SCAF11-204ENST00000395454 HMGN3Q15651 99 aa12.64□□□□□ -0.39
SCAF11-204ENST00000395454 SMIM21Q3B7S5 101 aa12.64□□□□□ -0.39
SCAF11-204ENST00000395454 DTX2Q86UW9 622 aa12.64□□□□□ -0.39
SCAF11-204ENST00000395454 MSI2Q96DH6 328 aaKnown RBP12.64□□□□□ -0.39
SCAF11-204ENST00000395454 OR10C1Q96KK4 312 aa12.64□□□□□ -0.39
SCAF11-204ENST00000395454 PRR13Q9NZ81 148 aa12.64□□□□□ -0.39
SCAF11-204ENST00000395454 GLS2Q9UI32 602 aa12.64□□□□□ -0.39
SCAF11-204ENST00000395454 FAM25EA8MYX2 175 aa12.64□□□□□ -0.39
SCAF11-204ENST00000395454 SRRM5B3KS81 715 aa12.64□□□□□ -0.39
SCAF11-204ENST00000395454 SPRY3O43610 288 aa12.64□□□□□ -0.39
SCAF11-204ENST00000395454 HTR2BP41595 481 aa12.64□□□□□ -0.39
SCAF11-204ENST00000395454 EXOSC2Q13868 293 aaKnown RBP12.64□□□□□ -0.39
SCAF11-204ENST00000395454 OR2Z1Q8NG97 314 aa12.64□□□□□ -0.39
SCAF11-204ENST00000395454 GLYATL2Q8WU03 294 aa12.64□□□□□ -0.39
SCAF11-204ENST00000395454 ASH1LQ9NR48 2969 aaKnown RBP12.64□□□□□ -0.39
SCAF11-204ENST00000395454 RDH8Q9NYR8 311 aa12.64□□□□□ -0.39
SCAF11-204ENST00000395454 ITPR2Q14571 2701 aa12.63□□□□□ -0.39
SCAF11-204ENST00000395454 A6NLC8 198 aa12.63□□□□□ -0.39
SCAF11-204ENST00000395454 MPTX1A8MV57 137 aa12.63□□□□□ -0.39
SCAF11-204ENST00000395454 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.63□□□□□ -0.39
SCAF11-204ENST00000395454 WNT9BO14905 357 aa12.63□□□□□ -0.39
SCAF11-204ENST00000395454 PSPNO60542 156 aa12.63□□□□□ -0.39
SCAF11-204ENST00000395454 B3GALNT1O75752 331 aa12.63□□□□□ -0.39
SCAF11-204ENST00000395454 CFDP00746 253 aaPredicted RBP12.63□□□□□ -0.39
SCAF11-204ENST00000395454 OR5AC1P0C628 307 aa12.63□□□□□ -0.39
SCAF11-204ENST00000395454 SLC35E4Q6ICL7 350 aa12.63□□□□□ -0.39
SCAF11-204ENST00000395454 C11orf71Q6IPW1 123 aa12.63□□□□□ -0.39
SCAF11-204ENST00000395454 LIAT1Q6ZQX7 453 aa12.63□□□□□ -0.39
SCAF11-204ENST00000395454 ACOT7LQ6ZUV0 252 aa12.63□□□□□ -0.39
SCAF11-204ENST00000395454 THAP6Q8TBB0 222 aa12.63□□□□□ -0.39
SCAF11-204ENST00000395454 C18orf12Q96KH6 178 aa12.63□□□□□ -0.39
SCAF11-204ENST00000395454 CCL19Q99731 98 aa12.63□□□□□ -0.39
SCAF11-204ENST00000395454 RNF126Q9BV68 326 aa12.63□□□□□ -0.39
SCAF11-204ENST00000395454 ARL6Q9H0F7 186 aa12.63□□□□□ -0.39
SCAF11-204ENST00000395454 MS4A5Q9H3V2 200 aa12.63□□□□□ -0.39
SCAF11-204ENST00000395454 MBD2Q9UBB5 411 aa12.63□□□□□ -0.39
SCAF11-204ENST00000395454 OR2W1Q9Y3N9 320 aa12.63□□□□□ -0.39
SCAF11-204ENST00000395454 IGKV1D-13A0A0B4J2D9 117 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 C13orf42A0A1B0GVH6 325 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 RPS10-NUDT3A0A1W2PQS6 291 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 C17orf100A8MU93 164 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 BET1O15155 118 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 MPPED1O15442 326 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 RP2O75695 350 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 IGKV1-13P0DP09 117 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 S100A1P23297 94 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 SRPXP78539 464 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 C5orf24Q7Z6I8 188 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms