RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 WDFY1Q8IWB7 410 aa17.22■□□□□ 0.35
SHANK1-203ENST00000391813 PARP14Q460N5 1801 aa17.22■□□□□ 0.35
SHANK1-203ENST00000391813 TGIF2-C20orf24A0A0A6YYL0 155 aa17.22■□□□□ 0.35
SHANK1-203ENST00000391813 ASAH2BP0C7U1 165 aa17.22■□□□□ 0.35
SHANK1-203ENST00000391813 KLK2P20151 261 aa17.22■□□□□ 0.35
SHANK1-203ENST00000391813 GAMTQ14353 236 aa17.22■□□□□ 0.35
SHANK1-203ENST00000391813 ZNF355PQ9NSJ1 428 aa17.22■□□□□ 0.35
SHANK1-203ENST00000391813 HSPB8Q9UJY1 196 aa17.22■□□□□ 0.35
SHANK1-203ENST00000391813 DOCK5Q9H7D0 1870 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 CENPVL1A0A0U1RR11 272 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 HELTA6NFD8 242 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 RUNX1Q01196 453 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 LHX9Q9NQ69 397 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 SEC16AO15027 2179 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 BCL3P20749 454 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 BMP5P22003 454 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 TCL1AP56279 114 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 MGAT2Q10469 447 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 PLPPR5Q32ZL2 321 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 STPG1Q5TH74 334 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 C12orf54Q6X4T0 127 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 UBALD1Q8TB05 177 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 ATG101Q9BSB4 218 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 PSG11Q9UQ72 335 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 EFNB1P98172 346 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 LEMD1Q68G75 181 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 TMEM183AQ8IXX5 376 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 D2HGDHQ8N465 521 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 WFDC6Q9BQY6 131 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 TRGV8A0A0C4DH27 118 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 UBE2L3P68036 154 aaKnown RBP17.21■□□□□ 0.35
SHANK1-203ENST00000391813 OR2V2Q96R30 315 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 PCGF1Q9BSM1 259 aa17.21■□□□□ 0.35
SHANK1-203ENST00000391813 LOC285556D6RIA3 1793 aa17.2■□□□□ 0.34
SHANK1-203ENST00000391813 ISLRO14498 428 aa17.2■□□□□ 0.34
SHANK1-203ENST00000391813 CRYAAP02489 173 aa17.2■□□□□ 0.34
SHANK1-203ENST00000391813 CELA2BP08218 269 aaPredicted RBP17.2■□□□□ 0.34
SHANK1-203ENST00000391813 SCGB1C2P0DMR2 95 aa17.2■□□□□ 0.34
SHANK1-203ENST00000391813 CKAP5Q14008 2032 aa17.2■□□□□ 0.34
SHANK1-203ENST00000391813 IFI6P09912 130 aa17.2■□□□□ 0.34
SHANK1-203ENST00000391813 ANKRD55Q3KP44 614 aa17.2■□□□□ 0.34
SHANK1-203ENST00000391813 CRYM-AS1A6NIL9 109 aa17.2■□□□□ 0.34
SHANK1-203ENST00000391813 APCSP02743 223 aa17.2■□□□□ 0.34
SHANK1-203ENST00000391813 PPP1CCP36873 323 aaKnown RBP17.2■□□□□ 0.34
SHANK1-203ENST00000391813 OR1C1Q15619 314 aa17.2■□□□□ 0.34
SHANK1-203ENST00000391813 MRPL54Q6P161 138 aaKnown RBP17.2■□□□□ 0.34
SHANK1-203ENST00000391813 OR2Y1Q8NGV0 311 aa17.2■□□□□ 0.34
SHANK1-203ENST00000391813 NEURL1O76050 574 aa17.2■□□□□ 0.34
SHANK1-203ENST00000391813 TMEM11P17152 192 aa17.2■□□□□ 0.34
SHANK1-203ENST00000391813 OR8G5Q8NG78 346 aa17.2■□□□□ 0.34
SHANK1-203ENST00000391813 OR4A4PQ8NGN8 299 aa17.2■□□□□ 0.34
SHANK1-203ENST00000391813 HOXA5P20719 270 aa17.19■□□□□ 0.34
SHANK1-203ENST00000391813 MRGPRFQ96AM1 343 aa17.19■□□□□ 0.34
SHANK1-203ENST00000391813 AAMDCQ9H7C9 122 aa17.19■□□□□ 0.34
SHANK1-203ENST00000391813 ZNF665Q9H7R5 613 aa17.19■□□□□ 0.34
SHANK1-203ENST00000391813 LTBP1Q14766 1721 aa17.19■□□□□ 0.34
SHANK1-203ENST00000391813 A0A0G2JK05 382 aa17.19■□□□□ 0.34
SHANK1-203ENST00000391813 HAND1O96004 215 aa17.19■□□□□ 0.34
SHANK1-203ENST00000391813 VMA21Q3ZAQ7 101 aa17.19■□□□□ 0.34
SHANK1-203ENST00000391813 FDX2Q6P4F2 183 aa17.19■□□□□ 0.34
SHANK1-203ENST00000391813 GFRALQ6UXV0 394 aa17.19■□□□□ 0.34
SHANK1-203ENST00000391813 GLRX5Q86SX6 157 aa17.19■□□□□ 0.34
SHANK1-203ENST00000391813 ADTRPQ96IZ2 230 aa17.19■□□□□ 0.34
SHANK1-203ENST00000391813 PARD6GQ9BYG4 376 aaPredicted RBP17.19■□□□□ 0.34
SHANK1-203ENST00000391813 CISD1Q9NZ45 108 aaKnown RBP17.19■□□□□ 0.34
SHANK1-203ENST00000391813 FCGR3AP08637 254 aa17.19■□□□□ 0.34
SHANK1-203ENST00000391813 CBLN4Q9NTU7 201 aa17.19■□□□□ 0.34
SHANK1-203ENST00000391813 ACER2Q5QJU3 275 aa17.19■□□□□ 0.34
SHANK1-203ENST00000391813 TMEM222Q9H0R3 208 aa17.19■□□□□ 0.34
SHANK1-203ENST00000391813 WIPI2Q9Y4P8 454 aa17.19■□□□□ 0.34
SHANK1-203ENST00000391813 ZNF519Q8TB69 540 aa17.18■□□□□ 0.34
SHANK1-203ENST00000391813 C5orf66Q9H5L9 145 aa17.18■□□□□ 0.34
SHANK1-203ENST00000391813 PATE3B3GLJ2 98 aa17.18■□□□□ 0.34
SHANK1-203ENST00000391813 B4E171 279 aa17.18■□□□□ 0.34
SHANK1-203ENST00000391813 RPL36A-HNRNPH2H7BZ11 118 aa17.18■□□□□ 0.34
SHANK1-203ENST00000391813 SRSF10O75494 262 aaKnown RBP17.18■□□□□ 0.34
SHANK1-203ENST00000391813 SP9P0CG40 484 aa17.18■□□□□ 0.34
SHANK1-203ENST00000391813 TSPAN7P41732 249 aa17.18■□□□□ 0.34
SHANK1-203ENST00000391813 HES1Q14469 280 aa17.18■□□□□ 0.34
SHANK1-203ENST00000391813 PSG5Q15238 335 aa17.18■□□□□ 0.34
SHANK1-203ENST00000391813 OR4A47Q6IF82 309 aa17.18■□□□□ 0.34
SHANK1-203ENST00000391813 POC1AQ8NBT0 407 aa17.18■□□□□ 0.34
SHANK1-203ENST00000391813 SMPD2O60906 423 aa17.18■□□□□ 0.34
SHANK1-203ENST00000391813 DXOO77932 396 aaKnown RBP17.18■□□□□ 0.34
SHANK1-203ENST00000391813 ACTL6AO96019 429 aa17.18■□□□□ 0.34
SHANK1-203ENST00000391813 SP1P08047 785 aa17.18■□□□□ 0.34
SHANK1-203ENST00000391813 FAM157CP0CG43 387 aa17.18■□□□□ 0.34
SHANK1-203ENST00000391813 F2RP25116 425 aa17.18■□□□□ 0.34
SHANK1-203ENST00000391813 Q56UQ5 140 aa17.18■□□□□ 0.34
SHANK1-203ENST00000391813 OR4S2Q8NH73 311 aa17.18■□□□□ 0.34
SHANK1-203ENST00000391813 IFITM10A6NMD0 228 aa17.17■□□□□ 0.34
SHANK1-203ENST00000391813 GREM1O60565 184 aa17.17■□□□□ 0.34
SHANK1-203ENST00000391813 LGALS4P56470 323 aa17.17■□□□□ 0.34
SHANK1-203ENST00000391813 HIKESHIQ53FT3 197 aa17.17■□□□□ 0.34
SHANK1-203ENST00000391813 ZNF766Q5HY98 468 aa17.17■□□□□ 0.34
SHANK1-203ENST00000391813 HIST1H1EP10412 219 aaKnown RBP17.17■□□□□ 0.34
SHANK1-203ENST00000391813 SFTPCP11686 197 aa17.17■□□□□ 0.34
SHANK1-203ENST00000391813 DEFB108BQ8NET1 73 aa17.17■□□□□ 0.34
SHANK1-203ENST00000391813 OR4P4Q8NGL7 312 aa17.17■□□□□ 0.34
SHANK1-203ENST00000391813 APOBEC4Q8WW27 367 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms