RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 GCM1Q9NP62 436 aa16.64■□□□□ 0.25
PDLIM5-205ENST00000380180 RAI1Q7Z5J4 1906 aaPredicted RBP16.64■□□□□ 0.25
PDLIM5-205ENST00000380180 OR4A8P0C604 315 aa16.63■□□□□ 0.25
PDLIM5-205ENST00000380180 ASCL1P50553 236 aa16.63■□□□□ 0.25
PDLIM5-205ENST00000380180 TESK1Q15569 626 aa16.63■□□□□ 0.25
PDLIM5-205ENST00000380180 KRBOX4Q5JUW0 171 aa16.63■□□□□ 0.25
PDLIM5-205ENST00000380180 CMTM1Q8IZ96 169 aa16.63■□□□□ 0.25
PDLIM5-205ENST00000380180 KDF1Q8NAX2 398 aaPredicted RBP16.63■□□□□ 0.25
PDLIM5-205ENST00000380180 DCUN1D4Q92564 292 aa16.63■□□□□ 0.25
PDLIM5-205ENST00000380180 GLIPR1P48060 266 aa16.63■□□□□ 0.25
PDLIM5-205ENST00000380180 SNTB1Q13884 538 aaKnown RBP16.63■□□□□ 0.25
PDLIM5-205ENST00000380180 LY6DQ14210 128 aa16.63■□□□□ 0.25
PDLIM5-205ENST00000380180 MEX3BQ6ZN04 569 aaKnown RBP16.63■□□□□ 0.25
PDLIM5-205ENST00000380180 TPRX1Q8N7U7 411 aa16.63■□□□□ 0.25
PDLIM5-205ENST00000380180 OR10V1Q8NGI7 309 aa16.63■□□□□ 0.25
PDLIM5-205ENST00000380180 TMEM222Q9H0R3 208 aa16.63■□□□□ 0.25
PDLIM5-205ENST00000380180 NGBQ9NPG2 151 aa16.63■□□□□ 0.25
PDLIM5-205ENST00000380180 OR5AC2Q9NZP5 309 aa16.63■□□□□ 0.25
PDLIM5-205ENST00000380180 DSCAML1Q8TD84 2053 aa16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 OOEPA6NGQ2 149 aa16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 C12orf77C9JDV5 145 aa16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 TNFSF12O43508 249 aa16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 ZNF737O75373 536 aa16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 TNFSF4P23510 183 aa16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 PLA2G5P39877 138 aa16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 CEACAM6P40199 344 aa16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 PRSS54Q6PEW0 395 aa16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 OR1L1Q8NH94 360 aa16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 FBXO9Q9UK97 447 aaPredicted RBP16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 UBE2J1Q9Y385 318 aaPredicted RBP16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 ERVH48-1M5A8F1 160 aa16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 PGLYRP1O75594 196 aaPredicted RBP16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 LYL1P12980 280 aa16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 LUMP51884 338 aaPredicted RBP16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 FAM201AQ5SY85 155 aa16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 BVESQ8NE79 360 aa16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 MRGPRDQ8TDS7 321 aa16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 GALMQ96C23 342 aa16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 RRNAD1Q96FB5 475 aaKnown RBP16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 SEBOXQ9HB31 216 aaPredicted RBP16.62■□□□□ 0.25
PDLIM5-205ENST00000380180 CHRNB4P30926 498 aa16.61■□□□□ 0.25
PDLIM5-205ENST00000380180 S100A10P60903 97 aa16.61■□□□□ 0.25
PDLIM5-205ENST00000380180 TMEM268Q5VZI3 342 aa16.61■□□□□ 0.25
PDLIM5-205ENST00000380180 SLC51BQ86UW2 128 aa16.61■□□□□ 0.25
PDLIM5-205ENST00000380180 SLC35G3Q8N808 338 aa16.61■□□□□ 0.25
PDLIM5-205ENST00000380180 PARP12Q9H0J9 701 aaKnown RBP16.61■□□□□ 0.25
PDLIM5-205ENST00000380180 RNF7Q9UBF6 113 aa16.61■□□□□ 0.25
PDLIM5-205ENST00000380180 PKDREJQ9NTG1 2253 aa16.61■□□□□ 0.25
PDLIM5-205ENST00000380180 TANC2Q9HCD6 1990 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 FAM90A27PA6NNH2 459 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 NCMAPQ5T1S8 102 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 FOXRED2Q8IWF2 684 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 LILRB1Q8NHL6 650 aaPredicted RBP16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 TMEM56Q96MV1 263 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 CNTNAP3BQ96NU0 1288 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 CNTNAP3Q9BZ76 1288 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 ESRP2Q9H6T0 727 aaKnown RBP16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 TMEM56-RWDD3S4R434 201 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 CACNA1AO00555 2505 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 NBEAQ8NFP9 2946 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 KANTRA0A1W2PQU2 76 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 NKX2-6A6NCS4 301 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 IGLV2-14P01704 120 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 HBZP02008 142 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 PET100P0DJ07 73 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 IL2RGP31785 369 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 SRPXP78539 464 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 PAX5Q02548 391 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 OR13A1Q8NGR1 328 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 OR1S1Q8NH92 325 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 SNX22Q96L94 193 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 DNTTIP1Q9H147 329 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 TMED3Q9Y3Q3 217 aa16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 RBM7Q9Y580 266 aaKnown RBP16.6■□□□□ 0.25
PDLIM5-205ENST00000380180 BCL2L11O43521 198 aa16.59■□□□□ 0.25
PDLIM5-205ENST00000380180 SPDEFO95238 335 aa16.59■□□□□ 0.25
PDLIM5-205ENST00000380180 OR8U9P0C7N5 309 aa16.59■□□□□ 0.25
PDLIM5-205ENST00000380180 S100GP29377 79 aa16.59■□□□□ 0.25
PDLIM5-205ENST00000380180 CD80P33681 288 aa16.59■□□□□ 0.25
PDLIM5-205ENST00000380180 CCL8P80075 99 aa16.59■□□□□ 0.25
PDLIM5-205ENST00000380180 EDDM3AQ14507 147 aa16.59■□□□□ 0.25
PDLIM5-205ENST00000380180 FBXL19-AS1Q494R0 122 aa16.59■□□□□ 0.25
PDLIM5-205ENST00000380180 ALKAL2Q6UX46 152 aa16.59■□□□□ 0.25
PDLIM5-205ENST00000380180 ZNF695Q8IW36 515 aa16.59■□□□□ 0.25
PDLIM5-205ENST00000380180 ZCCHC24Q8N2G6 241 aaKnown RBP16.59■□□□□ 0.25
PDLIM5-205ENST00000380180 ZNRF1Q8ND25 227 aa16.59■□□□□ 0.25
PDLIM5-205ENST00000380180 OR8U1Q8NH10 309 aa16.59■□□□□ 0.25
PDLIM5-205ENST00000380180 ANGPTL6Q8NI99 470 aa16.59■□□□□ 0.25
PDLIM5-205ENST00000380180 PCNPQ8WW12 178 aaKnown RBP16.59■□□□□ 0.25
PDLIM5-205ENST00000380180 PLPPR2Q96GM1 343 aa16.59■□□□□ 0.25
PDLIM5-205ENST00000380180 COQ3Q9NZJ6 369 aa16.59■□□□□ 0.25
PDLIM5-205ENST00000380180 TPRP12270 2363 aaKnown RBP16.59■□□□□ 0.25
PDLIM5-205ENST00000380180 ARFGEF3Q5TH69 2177 aa16.59■□□□□ 0.25
PDLIM5-205ENST00000380180 C17orf100A8MU93 164 aa16.58■□□□□ 0.25
PDLIM5-205ENST00000380180 SHISA9B4DS77 424 aa16.58■□□□□ 0.25
PDLIM5-205ENST00000380180 CDS2O95674 445 aa16.58■□□□□ 0.25
PDLIM5-205ENST00000380180 CYB5R3P00387 301 aaPredicted RBP16.58■□□□□ 0.25
PDLIM5-205ENST00000380180 SFTPCP11686 197 aa16.58■□□□□ 0.25
PDLIM5-205ENST00000380180 S100A1P23297 94 aa16.58■□□□□ 0.25
PDLIM5-205ENST00000380180 F2RP25116 425 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms