RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 H1FOOQ8IZA3 346 aaPredicted RBP13.5□□□□□ -0.25
CNKSR1-202ENST00000374253 OR8U1Q8NH10 309 aa13.5□□□□□ -0.25
CNKSR1-202ENST00000374253 TSNAXQ99598 290 aaKnown RBP13.5□□□□□ -0.25
CNKSR1-202ENST00000374253 PURGQ9UJV8 347 aaKnown RBP13.5□□□□□ -0.25
CNKSR1-202ENST00000374253 PLCE1Q9P212 2302 aa13.5□□□□□ -0.25
CNKSR1-202ENST00000374253 LOC105371267A0A1B0GV96 52 aa13.5□□□□□ -0.25
CNKSR1-202ENST00000374253 HAND1O96004 215 aa13.5□□□□□ -0.25
CNKSR1-202ENST00000374253 ZNF880Q6PDB4 577 aa13.5□□□□□ -0.25
CNKSR1-202ENST00000374253 ZNF497Q6ZNH5 498 aa13.5□□□□□ -0.25
CNKSR1-202ENST00000374253 TMEM217Q8N7C4 229 aa13.5□□□□□ -0.25
CNKSR1-202ENST00000374253 RHOFQ9HBH0 211 aa13.5□□□□□ -0.25
CNKSR1-202ENST00000374253 MMP26Q9NRE1 261 aa13.5□□□□□ -0.25
CNKSR1-202ENST00000374253 PROCRQ9UNN8 238 aa13.5□□□□□ -0.25
CNKSR1-202ENST00000374253 USF3Q68DE3 2245 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 IGHV1-18A0A0C4DH31 117 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 IGSF23A1L1A6 192 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 RAB19A4D1S5 217 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 F8W036 122 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 H3BP45 60 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 KLK10O43240 276 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 CST7O76096 145 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 TMEM50AO95807 157 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 MUC1P15941 1255 aaPredicted RBP13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 BLOC1S1P78537 153 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 EWSR1Q01844 656 aaKnown RBP eCLIP13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 AESQ08117 197 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 TESK1Q15569 626 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 C11orf53Q8IXP5 236 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 SMIM8Q96KF7 97 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 TLNRD1Q9H1K6 362 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 METRNQ9UJH8 293 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 RNF150Q9ULK6 438 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 SH2D1BO14796 132 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 IGLV2-14P01704 120 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 F2RP25116 425 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 UCP1P25874 307 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 SULT1A2P50226 295 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 RND3P61587 244 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 EIF5AP63241 154 aaKnown RBP13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 PJVKQ0ZLH3 352 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 TMEM88Q6PEY1 159 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 OR8G5Q8NG78 346 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 OR10V1Q8NGI7 309 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 DUSP13Q9UII6 198 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 CUL9Q8IWT3 2517 aa13.49□□□□□ -0.25
CNKSR1-202ENST00000374253 CNOT4O95628 575 aaKnown RBP13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 CEACAM6P40199 344 aa13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 P2RY1P47900 373 aa13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 ZNF83P51522 516 aa13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 SRPXP78539 464 aa13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 ZNF616Q08AN1 781 aa13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 NMSQ5H8A3 153 aa13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 EIF5AL1Q6IS14 154 aaKnown RBP13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 LRP11Q86VZ4 500 aa13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 PUSL1Q8N0Z8 303 aaKnown RBP13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 OR2C3Q8N628 320 aa13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 UBAC2Q8NBM4 344 aa13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 BOD1Q96IK1 185 aa13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 ZNF71Q9NQZ8 489 aaPredicted RBP13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 PLSCR4Q9NRQ2 329 aa13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 TRBV6-6A0A0A6YYG2 114 aa13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 IGHV2OR16-5A0A0B4J2B6 119 aa13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 ATG12O94817 140 aa13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 GAPDHP04406 335 aaKnown RBP13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 ZNF273Q14593 569 aa13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 SWI5Q1ZZU3 235 aa13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 VHLLQ6RSH7 139 aa13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 OR1L1Q8NH94 360 aa13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 RNASE11Q8TAA1 199 aaKnown RBP13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 NKX6-2Q9C056 277 aaPredicted RBP13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 TAAR3PQ9P1P4 343 aa13.48□□□□□ -0.25
CNKSR1-202ENST00000374253 C9JQL5 133 aa13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 J3QW42 95 aa13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 CEACAM4O75871 244 aa13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 PTBP3O95758 552 aaKnown RBP13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 SERPINE2P07093 398 aa13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 CD80P33681 288 aa13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 ZNF146Q15072 292 aa13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 MSMPQ1L6U9 139 aa13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 UQCC3Q6UW78 93 aa13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 BHLHA15Q7RTS1 189 aaPredicted RBP13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 Q8IYB0 196 aa13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 CABLES2Q9BTV7 478 aa13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 RELNP78509 3460 aa13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 H0Y980 276 aa13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 CGAP01215 116 aa13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 VDAC1P21796 283 aa13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 OR3A1P47881 315 aa13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 OR2B11Q5JQS5 317 aa13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 Q6ZRM9 215 aa13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 BCL2L14Q9BZR8 327 aa13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 IFT22Q9H7X7 185 aa13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 UQCC1Q9NVA1 299 aa13.47□□□□□ -0.25
CNKSR1-202ENST00000374253 ZGRF1Q86YA3 2104 aa13.46□□□□□ -0.25
CNKSR1-202ENST00000374253 AHRRA9YTQ3 701 aa13.46□□□□□ -0.25
CNKSR1-202ENST00000374253 DNASE2O00115 360 aaPredicted RBP13.46□□□□□ -0.25
CNKSR1-202ENST00000374253 CHST1O43916 411 aa13.46□□□□□ -0.25
CNKSR1-202ENST00000374253 GCH1P30793 250 aa13.46□□□□□ -0.25
CNKSR1-202ENST00000374253 VAMP2P63027 116 aa13.46□□□□□ -0.25
CNKSR1-202ENST00000374253 TMEM182Q6ZP80 229 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms