RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 CLEC7AQ9BXN2 247 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 AUNIPQ9H7T9 357 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 Q9N2K0 584 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 ZNF69Q9UC07 566 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 FAM96BQ9Y3D0 163 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 CELSR1Q9NYQ6 3014 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 TRDCB7Z8K6 153 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 F2RL2O00254 374 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 SDCBPO00560 298 aaPredicted RBP9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 CTDSP2O14595 271 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 HBZP02008 142 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 ARG1P05089 322 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 EIF4EP06730 217 aaKnown RBP9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 MELTFP08582 738 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 ELK1P19419 428 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 SSTR5P35346 364 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 KIR2DS4P43632 304 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 DLX1P56177 255 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 PRB3Q04118 309 aaPredicted RBP9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 KLRD1Q13241 179 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 KIR2DS1Q14954 304 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 SRSF7Q16629 238 aaKnown RBP eCLIP9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 HCP5Q6MZN7 132 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 BRD3OSQ6XYD6 125 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 C9orf139Q6ZV77 190 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 IZUMO1Q8IYV9 350 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 MCFD2Q8NI22 146 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 ZNF596Q8TC21 504 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 ZNF418Q8TF45 676 aaPredicted RBP9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 KIRREL1Q96J84 757 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 HDHD3Q9BSH5 251 aaPredicted RBP9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 OR2S2Q9NQN1 319 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 GNG12Q9UBI6 72 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 MRPS7Q9Y2R9 242 aaKnown RBP9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 ZANQ9Y493 2812 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 ABCA2Q9BZC7 2435 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 TLN2Q9Y4G6 2542 aa9.72□□□□□ -0.85
SPTLC1-202ENST00000337841 A0A087X0M5 115 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 IGHV2-26A0A0B4J1V2 119 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 A0A1B0GX30 115 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 MEIOCA2RUB1 952 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 TMEM235A6NFC5 223 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 RGS11O94810 467 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 TPPPO94811 219 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 FCGR3AP08637 254 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 DTYMKP23919 212 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 CD34P28906 385 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 GDNFP39905 211 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 CBX5P45973 191 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 TAS2R20P59543 309 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 HTD2P86397 168 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 HMGN3Q15651 99 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 RUSC1-AS1Q66K80 236 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 DTX3Q8N9I9 347 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 OR9G1Q8NH87 305 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 OR1L1Q8NH94 360 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 UBALD1Q8TB05 177 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 C15orf40Q8WUR7 153 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 C22orf15Q8WYQ4 148 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 CREB3L1Q96BA8 519 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 CYYR1Q96J86 154 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 DCUN1D5Q9BTE7 237 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 ST6GALNAC5Q9BVH7 336 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 SLIRPQ9GZT3 109 aaKnown RBP9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 C6orf62Q9GZU0 229 aaPredicted RBP9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 MMP27Q9H306 513 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 BATF3Q9NR55 127 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 GFOD1Q9NXC2 390 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 WNK2Q9Y3S1 2297 aa9.71□□□□□ -0.86
SPTLC1-202ENST00000337841 HSPA12AO43301 675 aa9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 HTR1DP28221 377 aa9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 PRSS3P35030 304 aa9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 HLA-DRB3P79483 266 aa9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 Q3ZCU0 254 aa9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 MINOS1Q5TGZ0 78 aa9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 STEAP3Q658P3 488 aa9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 ZNF626Q68DY1 528 aa9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 BCL6BQ8N143 479 aaPredicted RBP9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 BEND2Q8NDZ0 799 aa9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 OR4A4PQ8NGN8 299 aa9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 IL1F10Q8WWZ1 152 aa9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 MALSU1Q96EH3 234 aa9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 OCSTAMPQ9BR26 566 aa9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 NXF2Q9GZY0 626 aaKnown RBP9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 ZNF286AQ9HBT8 521 aa9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 RABL2AQ9UBK7 228 aaPredicted RBP9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 EXTL2Q9UBQ6 330 aa9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 JPT1Q9UK76 154 aa9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 ELF5Q9UKW6 265 aaPredicted RBP9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 RABL2BQ9UNT1 228 aa9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 PSG11Q9UQ72 335 aa9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 TBL2Q9Y4P3 447 aaKnown RBP9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 MINOS1-NBL1R4GNA1 71 aa9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 A3GALT2U3KPV4 340 aa9.7□□□□□ -0.86
SPTLC1-202ENST00000337841 A0A0A6YYJ9 748 aa9.69□□□□□ -0.86
SPTLC1-202ENST00000337841 IGHV3-43A0A0B4J1X8 118 aa9.69□□□□□ -0.86
SPTLC1-202ENST00000337841 A6NHS1 94 aa9.69□□□□□ -0.86
SPTLC1-202ENST00000337841 LEUTXA8MZ59 168 aa9.69□□□□□ -0.86
SPTLC1-202ENST00000337841 J3QR06 171 aa9.69□□□□□ -0.86
SPTLC1-202ENST00000337841 FABP7O15540 132 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms