RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 PRRT1Q99946 306 aa10.78□□□□□ -0.68
DDX39A-202ENST00000324340 GGACTQ9BVM4 153 aa10.78□□□□□ -0.68
DDX39A-202ENST00000324340 SELENOIQ9C0D9 397 aa10.78□□□□□ -0.68
DDX39A-202ENST00000324340 PARP11Q9NR21 331 aa10.78□□□□□ -0.68
DDX39A-202ENST00000324340 ZDHHC8Q9ULC8 765 aa10.78□□□□□ -0.68
DDX39A-202ENST00000324340 POLDIP2Q9Y2S7 368 aa10.78□□□□□ -0.68
DDX39A-202ENST00000324340 TRAV18A0A075B6X5 111 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 C19orf84I3L1E1 186 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 SIGLEC5O15389 551 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 PPIHO43447 177 aaKnown RBP10.77□□□□□ -0.68
DDX39A-202ENST00000324340 RHBDL1O75783 438 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 RAB3DO95716 219 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 PLAUP00749 431 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 MUC1P15941 1255 aaPredicted RBP10.77□□□□□ -0.68
DDX39A-202ENST00000324340 BCL3P20749 454 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 ZBTB25P24278 435 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 PSMB6P28072 239 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 APOBEC3AP31941 199 aaPredicted RBP10.77□□□□□ -0.68
DDX39A-202ENST00000324340 CEACAM6P40199 344 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 GATA4P43694 442 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 NPBWR2P48146 333 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 TAS2R31P59538 309 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 FGF12P61328 243 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 ERVK11-1P61568 191 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 DHRS2Q13268 280 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 ZNF260Q3ZCT1 412 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 SSX9Q7RTT3 188 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 Q8IYB0 196 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 OSR2Q8N2R0 312 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 OR2Z1Q8NG97 314 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 PPP1R1CQ8WVI7 109 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 C14orf79Q96F83 325 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 DIRC2Q96SL1 478 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 PHB2Q99623 299 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 C2orf88Q9BSF0 95 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 SMDT1Q9H4I9 107 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.77□□□□□ -0.68
DDX39A-202ENST00000324340 GFOD1Q9NXC2 390 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 TMED3Q9Y3Q3 217 aa10.77□□□□□ -0.68
DDX39A-202ENST00000324340 DIDO1Q9BTC0 2240 aaKnown RBP10.77□□□□□ -0.69
DDX39A-202ENST00000324340 FAM90A10PA6NDY2 464 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 FAM90A18PA6NE21 464 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 FAM90A16PA6NEW6 464 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 FAM90A20PA6NIJ5 464 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 FAM90A8PA6NJQ4 464 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 FAM90A7PA6NKC0 464 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 FAM90A22PA8MWA6 464 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 FAM90A12PA8MX19 464 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 FAM90A5PA8MXJ8 464 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 FAM90A23PA8MXZ1 464 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 TRAPPC2LH3BP13 241 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 CDIPTO14735 213 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 SOCS1O15524 211 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 IGHV1-46P01743 117 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 CD55P08174 381 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 SFTA3P0C7M3 94 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 FAM90A15PP0C7V4 464 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 FAM90A13PP0C7W8 464 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 FAM90A14PP0C7W9 464 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 FAM90A24PP0C7X0 464 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 PGA5P0DJD9 388 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 TBPP20226 339 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 CFHR2P36980 270 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 CDX1P47902 265 aaPredicted RBP10.77□□□□□ -0.69
DDX39A-202ENST00000324340 PPT1P50897 306 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 TMEM50BP56557 158 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 RBM11P57052 281 aaKnown RBP10.77□□□□□ -0.69
DDX39A-202ENST00000324340 DAZAP2Q15038 168 aaPredicted RBP10.77□□□□□ -0.69
DDX39A-202ENST00000324340 ZNF672Q499Z4 452 aaPredicted RBP10.77□□□□□ -0.69
DDX39A-202ENST00000324340 PLAC9Q5JTB6 97 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 FAAP20Q6NZ36 180 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 FBXL14Q8N1E6 418 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 LYPD6BQ8NI32 183 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 NEUROG1Q92886 237 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 HES4Q9HCC6 221 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 CYTL1Q9NRR1 136 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 CISD1Q9NZ45 108 aaKnown RBP10.77□□□□□ -0.69
DDX39A-202ENST00000324340 CACFD1Q9UGQ2 172 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 IL19Q9UHD0 177 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 HSF4Q9ULV5 492 aa10.77□□□□□ -0.69
DDX39A-202ENST00000324340 SMG1Q96Q15 3661 aaKnown RBP10.76□□□□□ -0.69
DDX39A-202ENST00000324340 CADP27708 2225 aa10.76□□□□□ -0.69
DDX39A-202ENST00000324340 CFAP46Q8IYW2 2715 aa10.76□□□□□ -0.69
DDX39A-202ENST00000324340 NBASA2RRP1 2371 aa10.76□□□□□ -0.69
DDX39A-202ENST00000324340 ELOA3CA0A087WX78 387 aaPredicted RBP10.76□□□□□ -0.69
DDX39A-202ENST00000324340 B9A039 149 aa10.76□□□□□ -0.69
DDX39A-202ENST00000324340 TGOLN2O43493 480 aa10.76□□□□□ -0.69
DDX39A-202ENST00000324340 GOSR1O95249 250 aa10.76□□□□□ -0.69
DDX39A-202ENST00000324340 IFNA2P01563 188 aa10.76□□□□□ -0.69
DDX39A-202ENST00000324340 GRPP07492 148 aa10.76□□□□□ -0.69
DDX39A-202ENST00000324340 FCGR3AP08637 254 aa10.76□□□□□ -0.69
DDX39A-202ENST00000324340 GSTP1P09211 210 aaKnown RBP10.76□□□□□ -0.69
DDX39A-202ENST00000324340 PAX1P15863 534 aa10.76□□□□□ -0.69
DDX39A-202ENST00000324340 HIST1H1BP16401 226 aaKnown RBP10.76□□□□□ -0.69
DDX39A-202ENST00000324340 HIST1H1DP16402 221 aaKnown RBP10.76□□□□□ -0.69
DDX39A-202ENST00000324340 RAB4AP20338 218 aa10.76□□□□□ -0.69
DDX39A-202ENST00000324340 F2RL1P55085 397 aa10.76□□□□□ -0.69
DDX39A-202ENST00000324340 ARL6IP1Q15041 203 aa10.76□□□□□ -0.69
DDX39A-202ENST00000324340 PIGYQ3MUY2 71 aa10.76□□□□□ -0.69
DDX39A-202ENST00000324340 PRAMEF6Q5VXH4 476 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms