RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 TRAV14DV4A0A0A6YYC5 116 aa15.39■□□□□ 0.05
USP39-201ENST00000323701 TMEM30CPA0ZSE6 113 aa15.39■□□□□ 0.05
USP39-201ENST00000323701 LEUTXA8MZ59 168 aa15.39■□□□□ 0.05
USP39-201ENST00000323701 ADH4P08319 380 aa15.39■□□□□ 0.05
USP39-201ENST00000323701 SORDQ00796 357 aa15.39■□□□□ 0.05
USP39-201ENST00000323701 H1FOOQ8IZA3 346 aaPredicted RBP15.39■□□□□ 0.05
USP39-201ENST00000323701 SLC38A6Q8IZM9 456 aa15.39■□□□□ 0.05
USP39-201ENST00000323701 OR1L1Q8NH94 360 aa15.39■□□□□ 0.05
USP39-201ENST00000323701 CLEC4MQ9H2X3 399 aaPredicted RBP15.39■□□□□ 0.05
USP39-201ENST00000323701 PCDHB10Q9UN67 800 aa15.39■□□□□ 0.05
USP39-201ENST00000323701 RAI1Q7Z5J4 1906 aaPredicted RBP15.38■□□□□ 0.05
USP39-201ENST00000323701 TEX13DA0A0J9YY54 714 aaPredicted RBP15.38■□□□□ 0.05
USP39-201ENST00000323701 B8ZZF3 427 aa15.38■□□□□ 0.05
USP39-201ENST00000323701 C12orf77C9JDV5 145 aa15.38■□□□□ 0.05
USP39-201ENST00000323701 TNFSF4P23510 183 aa15.38■□□□□ 0.05
USP39-201ENST00000323701 EDDM3AQ14507 147 aa15.38■□□□□ 0.05
USP39-201ENST00000323701 HMGN3Q15651 99 aa15.38■□□□□ 0.05
USP39-201ENST00000323701 KRBOX4Q5JUW0 171 aa15.38■□□□□ 0.05
USP39-201ENST00000323701 SLC35E4Q6ICL7 350 aa15.38■□□□□ 0.05
USP39-201ENST00000323701 OR13A1Q8NGR1 328 aa15.38■□□□□ 0.05
USP39-201ENST00000323701 OR10J5Q8NHC4 309 aa15.38■□□□□ 0.05
USP39-201ENST00000323701 Q8TCH9 128 aa15.38■□□□□ 0.05
USP39-201ENST00000323701 MRGPRDQ8TDS7 321 aa15.38■□□□□ 0.05
USP39-201ENST00000323701 FAM222BQ8WU58 562 aa15.38■□□□□ 0.05
USP39-201ENST00000323701 MARVELD3Q96A59 401 aa15.38■□□□□ 0.05
USP39-201ENST00000323701 CCL28Q9NRJ3 127 aa15.38■□□□□ 0.05
USP39-201ENST00000323701 CISD1Q9NZ45 108 aaKnown RBP15.38■□□□□ 0.05
USP39-201ENST00000323701 RALYQ9UKM9 306 aaKnown RBP15.38■□□□□ 0.05
USP39-201ENST00000323701 IFNA2P01563 188 aa15.38■□□□□ 0.05
USP39-201ENST00000323701 TESK1Q15569 626 aa15.38■□□□□ 0.05
USP39-201ENST00000323701 ABCA11PQ4W5N1 156 aa15.38■□□□□ 0.05
USP39-201ENST00000323701 MOB1BQ7L9L4 216 aa15.38■□□□□ 0.05
USP39-201ENST00000323701 RNF115Q9Y4L5 304 aa15.38■□□□□ 0.05
USP39-201ENST00000323701 C13orf42A0A1B0GVH6 325 aa15.37■□□□□ 0.05
USP39-201ENST00000323701 H7C1Q1 480 aa15.37■□□□□ 0.05
USP39-201ENST00000323701 CD55P08174 381 aa15.37■□□□□ 0.05
USP39-201ENST00000323701 CTXN2P0C2S0 81 aa15.37■□□□□ 0.05
USP39-201ENST00000323701 OR5AC1P0C628 307 aa15.37■□□□□ 0.05
USP39-201ENST00000323701 SSTR5P35346 364 aa15.37■□□□□ 0.05
USP39-201ENST00000323701 SRSF4Q08170 494 aaKnown RBP15.37■□□□□ 0.05
USP39-201ENST00000323701 LRRC37A5PQ49AS3 106 aa15.37■□□□□ 0.05
USP39-201ENST00000323701 SGPP2Q8IWX5 399 aa15.37■□□□□ 0.05
USP39-201ENST00000323701 OR8H3Q8N146 312 aa15.37■□□□□ 0.05
USP39-201ENST00000323701 PCNPQ8WW12 178 aaKnown RBP15.37■□□□□ 0.05
USP39-201ENST00000323701 PIK3IP1Q96FE7 263 aa15.37■□□□□ 0.05
USP39-201ENST00000323701 ARPC5LQ9BPX5 153 aa15.37■□□□□ 0.05
USP39-201ENST00000323701 NAA60Q9H7X0 242 aa15.37■□□□□ 0.05
USP39-201ENST00000323701 DIRAS3O95661 229 aa15.36■□□□□ 0.05
USP39-201ENST00000323701 CFDP00746 253 aaPredicted RBP15.36■□□□□ 0.05
USP39-201ENST00000323701 APOBEC3AP31941 199 aaPredicted RBP15.36■□□□□ 0.05
USP39-201ENST00000323701 FGFRL1Q8N441 504 aa15.36■□□□□ 0.05
USP39-201ENST00000323701 ITLN2Q8WWU7 325 aaPredicted RBP15.36■□□□□ 0.05
USP39-201ENST00000323701 OR10C1Q96KK4 312 aa15.36■□□□□ 0.05
USP39-201ENST00000323701 SLC5A7Q9GZV3 580 aa15.36■□□□□ 0.05
USP39-201ENST00000323701 USP9XQ93008 2570 aaPredicted RBP15.36■□□□□ 0.05
USP39-201ENST00000323701 ASH1LQ9NR48 2969 aaKnown RBP15.36■□□□□ 0.05
USP39-201ENST00000323701 HSD17B6O14756 317 aa15.36■□□□□ 0.05
USP39-201ENST00000323701 CD8AP01732 235 aa15.36■□□□□ 0.05
USP39-201ENST00000323701 HEXAP06865 529 aa15.36■□□□□ 0.05
USP39-201ENST00000323701 HOXB5P09067 269 aa15.36■□□□□ 0.05
USP39-201ENST00000323701 CXCL2P19875 107 aa15.36■□□□□ 0.05
USP39-201ENST00000323701 EXOSC2Q13868 293 aaKnown RBP15.36■□□□□ 0.05
USP39-201ENST00000323701 BEX5Q5H9J7 111 aa15.36■□□□□ 0.05
USP39-201ENST00000323701 STUMQ69YW2 141 aa15.36■□□□□ 0.05
USP39-201ENST00000323701 TP53RKQ96S44 253 aa15.36■□□□□ 0.05
USP39-201ENST00000323701 PDCD10Q9BUL8 212 aa15.36■□□□□ 0.05
USP39-201ENST00000323701 SAP30LQ9HAJ7 183 aa15.36■□□□□ 0.05
USP39-201ENST00000323701 OR2W1Q9Y3N9 320 aa15.36■□□□□ 0.05
USP39-201ENST00000323701 IGLV2-14P01704 120 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 GYPAP02724 150 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 TMEM187Q14656 261 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 GNMTQ14749 295 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 RFESDQ8TAC1 157 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 LHFPL5Q8TAF8 219 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 GLYATL2Q8WU03 294 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 PPP1R1CQ8WVI7 109 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 RDH8Q9NYR8 311 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 PRELID1Q9Y255 219 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 TACC2O95359 2948 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 UTP20O75691 2785 aaKnown RBP15.35■□□□□ 0.05
USP39-201ENST00000323701 A0A0B4J2A0 478 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 C5orf51A6NDU8 294 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 NPIPB11E5RHQ5 1161 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 K7N7A8 449 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 TNFSF12O43508 249 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 HBZP02008 142 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 C4orf17Q53FE4 359 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 LPCAT3Q6P1A2 487 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 COQ8AQ8NI60 647 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 CCL13Q99616 98 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 SHPKQ9UHJ6 478 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 MYO18BQ8IUG5 2567 aa15.35■□□□□ 0.05
USP39-201ENST00000323701 RPS10-NUDT3A0A1W2PQS6 291 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 LINC00862A6NCI5 91 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 POM121CA8CG34 1229 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 MPPED1O15442 326 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 TNFRSF1AP19438 455 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 SWI5Q1ZZU3 235 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 FAM216BQ8N7L0 139 aa15.34■□□□□ 0.05
USP39-201ENST00000323701 OR52L2PQ8NGH6 319 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms