RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 LIM2P55344 173 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 IL13RA2Q14627 380 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 RAB33BQ9H082 229 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 DSCR3O14972 297 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 ZDHHC22Q8N966 263 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 OR4D11Q8NGI4 311 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 FFAR1O14842 300 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 TDGF1P3P51864 188 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 PWWP2BQ6NUJ5 590 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 TM4SF19Q96DZ7 209 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 FCMRO60667 390 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 SELENOTP62341 195 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 BIVMQ86UB2 503 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 VGLL1Q99990 258 aa13.98□□□□□ -0.17
UBR3-201ENST00000272793 TRAV8-4A0A0B4J246 113 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 HIGD1AQ9Y241 93 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 BCL9LQ86UU0 1499 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 A8MWL6 223 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 FGF17O60258 216 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 HLA-DRB1P01911 266 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 SEC11BP0C7V7 166 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 POLR2GP62487 172 aaKnown RBP eCLIP13.97□□□□□ -0.17
UBR3-201ENST00000272793 MRPS21P82921 87 aaKnown RBP13.97□□□□□ -0.17
UBR3-201ENST00000272793 HTRA3P83110 453 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 FOXB2Q5VYV0 432 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 DENND4AQ7Z401 1863 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 FRG2CA6NGY1 282 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 MBPP02686 304 aaPredicted RBP13.97□□□□□ -0.17
UBR3-201ENST00000272793 ISL1P61371 349 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 ASB5Q8WWX0 329 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 OPN4Q9UHM6 478 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 TMEM129A0AVI4 362 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 BGLAPP02818 100 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 GALNT14Q96FL9 552 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 PRSS27Q9BQR3 290 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 TAPBPO15533 448 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 GDF9O60383 454 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 KISS1Q15726 138 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 FAM109BQ6ICB4 259 aaPredicted RBP13.97□□□□□ -0.17
UBR3-201ENST00000272793 SFTA2Q6UW10 78 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 FGF13Q92913 245 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 PMCHL2Q9BQD1 86 aa13.97□□□□□ -0.17
UBR3-201ENST00000272793 MS4A7Q9GZW8 240 aaPredicted RBP13.97□□□□□ -0.17
UBR3-201ENST00000272793 ID4P47928 161 aa13.96□□□□□ -0.17
UBR3-201ENST00000272793 SCD5Q86SK9 330 aa13.96□□□□□ -0.17
UBR3-201ENST00000272793 NIT1Q86X76 327 aa13.96□□□□□ -0.17
UBR3-201ENST00000272793 OR1F12Q8NHA8 337 aa13.96□□□□□ -0.17
UBR3-201ENST00000272793 KIAA1549Q9HCM3 1950 aa13.96□□□□□ -0.17
UBR3-201ENST00000272793 MPLP40238 635 aa13.96□□□□□ -0.17
UBR3-201ENST00000272793 CX3CL1P78423 397 aa13.96□□□□□ -0.17
UBR3-201ENST00000272793 OR4A5Q8NH83 315 aa13.96□□□□□ -0.17
UBR3-201ENST00000272793 CLDN16Q9Y5I7 305 aa13.96□□□□□ -0.17
UBR3-201ENST00000272793 NDUFA3O95167 84 aa13.96□□□□□ -0.17
UBR3-201ENST00000272793 SFTPCP11686 197 aa13.96□□□□□ -0.17
UBR3-201ENST00000272793 CBLN2Q8IUK8 224 aa13.96□□□□□ -0.17
UBR3-201ENST00000272793 ARHGEF28Q8N1W1 1705 aaKnown RBP13.96□□□□□ -0.17
UBR3-201ENST00000272793 HBZP02008 142 aa13.96□□□□□ -0.17
UBR3-201ENST00000272793 VDAC1P21796 283 aa13.96□□□□□ -0.17
UBR3-201ENST00000272793 PCGF1Q9BSM1 259 aa13.96□□□□□ -0.17
UBR3-201ENST00000272793 FAM209BQ5JX69 171 aa13.96□□□□□ -0.18
UBR3-201ENST00000272793 FAM71F2Q6NXP2 309 aa13.96□□□□□ -0.18
UBR3-201ENST00000272793 Q6ZSR9 355 aa13.96□□□□□ -0.18
UBR3-201ENST00000272793 IP6K3Q96PC2 410 aa13.96□□□□□ -0.18
UBR3-201ENST00000272793 DUX5Q96PT3 197 aa13.96□□□□□ -0.18
UBR3-201ENST00000272793 SSBP4Q9BWG4 385 aaPredicted RBP13.96□□□□□ -0.18
UBR3-201ENST00000272793 OR5AC2Q9NZP5 309 aa13.96□□□□□ -0.18
UBR3-201ENST00000272793 PHIPQ8WWQ0 1821 aa13.96□□□□□ -0.18
UBR3-201ENST00000272793 CXorf65A6NEN9 183 aa13.96□□□□□ -0.18
UBR3-201ENST00000272793 VSTM2AQ8TAG5 236 aa13.96□□□□□ -0.18
UBR3-201ENST00000272793 TIAM2Q8IVF5 1701 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 TRGV5A0A0B4J1U4 118 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 CHST1O43916 411 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 DHRS2Q13268 280 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 TMEM155Q4W5P6 130 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 S100A7L2Q5SY68 101 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 LILRA3Q8N6C8 439 aaPredicted RBP13.95□□□□□ -0.18
UBR3-201ENST00000272793 Q9Y3F1 56 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 TMEM56-RWDD3S4R434 201 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 TRAV38-1A0A0B4J264 116 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 ST3GAL2Q16842 350 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 PARLQ9H300 379 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 SLC25A10Q9UBX3 287 aaPredicted RBP13.95□□□□□ -0.18
UBR3-201ENST00000272793 EML6Q6ZMW3 1958 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 H3BQ15 152 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 BTG2P78543 158 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 GLDNQ6ZMI3 551 aaPredicted RBP13.95□□□□□ -0.18
UBR3-201ENST00000272793 HARBI1Q96MB7 349 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 TRAF4Q9BUZ4 470 aaPredicted RBP13.95□□□□□ -0.18
UBR3-201ENST00000272793 TMEM38AQ9H6F2 299 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 LOXL2Q9Y4K0 774 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 ASPDHA6ND91 283 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 CXCL13O43927 109 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 CCL2P13500 99 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 PPP1R1AQ13522 171 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 FOXQ1Q9C009 403 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 ADGRB2O60241 1585 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 TET1Q8NFU7 2136 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 TMEM272A0A1B0GTI8 110 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 CFAP161Q6P656 301 aa13.95□□□□□ -0.18
UBR3-201ENST00000272793 SSC4DQ8WTU2 575 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms