RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ZNF441Q8N8Z8 693 aa14.46□□□□□ -0.1
PHRF1-201ENST00000264555 ZNF439Q8NDP4 499 aa14.46□□□□□ -0.1
PHRF1-201ENST00000264555 WNT2BQ93097 391 aa14.46□□□□□ -0.1
PHRF1-201ENST00000264555 TMEM45BQ96B21 275 aa14.46□□□□□ -0.1
PHRF1-201ENST00000264555 LINC00470Q9BZP3 86 aa14.46□□□□□ -0.1
PHRF1-201ENST00000264555 FAM117AQ9C073 453 aa14.46□□□□□ -0.1
PHRF1-201ENST00000264555 TMEM222Q9H0R3 208 aa14.46□□□□□ -0.1
PHRF1-201ENST00000264555 C5orf66Q9H5L9 145 aa14.46□□□□□ -0.1
PHRF1-201ENST00000264555 RFPL3SP0C7P2 107 aa14.46□□□□□ -0.1
PHRF1-201ENST00000264555 OPRK1P41145 380 aa14.46□□□□□ -0.1
PHRF1-201ENST00000264555 VSTM2AQ8TAG5 236 aa14.46□□□□□ -0.1
PHRF1-201ENST00000264555 LNP1A1A4G5 178 aa14.45□□□□□ -0.1
PHRF1-201ENST00000264555 CDRT15L2A8MXV6 281 aa14.45□□□□□ -0.1
PHRF1-201ENST00000264555 GAPDHP04406 335 aaKnown RBP14.45□□□□□ -0.1
PHRF1-201ENST00000264555 HOXD4P09016 255 aaPredicted RBP14.45□□□□□ -0.1
PHRF1-201ENST00000264555 WIPI2Q9Y4P8 454 aa14.45□□□□□ -0.1
PHRF1-201ENST00000264555 NPTNQ9Y639 398 aa14.45□□□□□ -0.1
PHRF1-201ENST00000264555 SCTP09683 121 aa14.45□□□□□ -0.1
PHRF1-201ENST00000264555 PRDX2P32119 198 aa14.45□□□□□ -0.1
PHRF1-201ENST00000264555 FGF8P55075 233 aaPredicted RBP14.45□□□□□ -0.1
PHRF1-201ENST00000264555 TGIF1Q15583 401 aa14.45□□□□□ -0.1
PHRF1-201ENST00000264555 RNF212Q495C1 297 aa14.45□□□□□ -0.1
PHRF1-201ENST00000264555 SSX8Q7RTT4 187 aa14.45□□□□□ -0.1
PHRF1-201ENST00000264555 H0Y980 276 aa14.45□□□□□ -0.1
PHRF1-201ENST00000264555 MFNGO00587 321 aa14.45□□□□□ -0.1
PHRF1-201ENST00000264555 SOX15O60248 233 aa14.45□□□□□ -0.1
PHRF1-201ENST00000264555 COL10A1Q03692 680 aa14.45□□□□□ -0.1
PHRF1-201ENST00000264555 TIPARPQ7Z3E1 657 aaKnown RBP14.45□□□□□ -0.1
PHRF1-201ENST00000264555 LIPGQ9Y5X9 500 aa14.45□□□□□ -0.1
PHRF1-201ENST00000264555 KCNAB3O43448 404 aa14.45□□□□□ -0.1
PHRF1-201ENST00000264555 SYNGR1O43759 233 aa14.45□□□□□ -0.1
PHRF1-201ENST00000264555 ANKRD55Q3KP44 614 aa14.45□□□□□ -0.1
PHRF1-201ENST00000264555 OVCH2Q7RTZ1 564 aa14.45□□□□□ -0.1
PHRF1-201ENST00000264555 OR5B3Q8NH48 314 aa14.45□□□□□ -0.1
PHRF1-201ENST00000264555 TMEM230Q96A57 120 aa14.45□□□□□ -0.1
PHRF1-201ENST00000264555 NPIPB7O75200 414 aa14.44□□□□□ -0.1
PHRF1-201ENST00000264555 G6PCP35575 357 aa14.44□□□□□ -0.1
PHRF1-201ENST00000264555 FAM24BQ8N5W8 94 aa14.44□□□□□ -0.1
PHRF1-201ENST00000264555 SOSTQ9BQB4 213 aa14.44□□□□□ -0.1
PHRF1-201ENST00000264555 SH2D2AQ9NP31 389 aa14.44□□□□□ -0.1
PHRF1-201ENST00000264555 MMP24Q9Y5R2 645 aa14.44□□□□□ -0.1
PHRF1-201ENST00000264555 MGAMO43451 1857 aa14.44□□□□□ -0.1
PHRF1-201ENST00000264555 PITX3O75364 302 aa14.44□□□□□ -0.1
PHRF1-201ENST00000264555 OR2H2O95918 312 aa14.44□□□□□ -0.1
PHRF1-201ENST00000264555 NQO2P16083 231 aa14.44□□□□□ -0.1
PHRF1-201ENST00000264555 GNB2P62879 340 aa14.44□□□□□ -0.1
PHRF1-201ENST00000264555 C17orf82Q86X59 251 aaPredicted RBP14.44□□□□□ -0.1
PHRF1-201ENST00000264555 ZNF835Q9Y2P0 537 aa14.44□□□□□ -0.1
PHRF1-201ENST00000264555 UNC119Q13432 240 aa14.44□□□□□ -0.1
PHRF1-201ENST00000264555 KRTCAP3Q53RY4 240 aa14.44□□□□□ -0.1
PHRF1-201ENST00000264555 RCC2Q9P258 522 aaKnown RBP14.44□□□□□ -0.1
PHRF1-201ENST00000264555 LOC102723996A0A087X1L8 192 aa14.44□□□□□ -0.1
PHRF1-201ENST00000264555 A0A1W2PN81 502 aa14.44□□□□□ -0.1
PHRF1-201ENST00000264555 DVL1O14640 695 aa14.44□□□□□ -0.1
PHRF1-201ENST00000264555 PPIHO43447 177 aaKnown RBP14.44□□□□□ -0.1
PHRF1-201ENST00000264555 MMP9P14780 707 aa14.44□□□□□ -0.1
PHRF1-201ENST00000264555 CHRNA7P36544 502 aa14.44□□□□□ -0.1
PHRF1-201ENST00000264555 PNRC1Q12796 327 aaPredicted RBP14.44□□□□□ -0.1
PHRF1-201ENST00000264555 PHYHD1Q5SRE7 291 aa14.44□□□□□ -0.1
PHRF1-201ENST00000264555 POM121Q96HA1 1249 aa14.44□□□□□ -0.1
PHRF1-201ENST00000264555 OPN3Q9H1Y3 402 aaPredicted RBP14.44□□□□□ -0.1
PHRF1-201ENST00000264555 AMMECR1Q9Y4X0 333 aaPredicted RBP14.44□□□□□ -0.1
PHRF1-201ENST00000264555 HOXA6P31267 233 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 FABP9Q0Z7S8 132 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 TXN2Q99757 166 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 RTN4RQ9BZR6 473 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 ABCA7Q8IZY2 2146 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 ZNHIT1O43257 154 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 ERVFC1-1P60608 527 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 RAB1BQ9H0U4 201 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 ZNF703Q9H7S9 590 aaPredicted RBP14.43□□□□□ -0.1
PHRF1-201ENST00000264555 MANBALQ9NQG1 85 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 TREM2Q9NZC2 230 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 ALPK2Q86TB3 2170 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 FAM186AA6NE01 2351 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 UMODP07911 640 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 PPP1CCP36873 323 aaKnown RBP14.43□□□□□ -0.1
PHRF1-201ENST00000264555 SUCLG1P53597 346 aaKnown RBP14.43□□□□□ -0.1
PHRF1-201ENST00000264555 IGLV3-32A0A0A0MS00 114 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 RCC1P18754 421 aaPredicted RBP14.43□□□□□ -0.1
PHRF1-201ENST00000264555 AWAT1Q58HT5 328 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 C12orf57Q99622 126 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 MS4A5Q9H3V2 200 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 PIPOXQ9P0Z9 390 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 MELTFP08582 738 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 ATP6V0CP27449 155 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 SSTP61278 116 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 CFHR1Q03591 330 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 ASCL5Q7RTU5 278 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 FGF11Q92914 225 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 BSCL2Q96G97 398 aaPredicted RBP14.43□□□□□ -0.1
PHRF1-201ENST00000264555 MRPL13Q9BYD1 178 aaKnown RBP14.43□□□□□ -0.1
PHRF1-201ENST00000264555 TIMM9Q9Y5J7 89 aa14.43□□□□□ -0.1
PHRF1-201ENST00000264555 ERVH48-1M5A8F1 160 aa14.42□□□□□ -0.1
PHRF1-201ENST00000264555 CFDP00746 253 aaPredicted RBP14.42□□□□□ -0.1
PHRF1-201ENST00000264555 IGFBP3P17936 291 aaPredicted RBP14.42□□□□□ -0.1
PHRF1-201ENST00000264555 NHLH2Q02577 135 aa14.42□□□□□ -0.1
PHRF1-201ENST00000264555 Q5BKY6 102 aa14.42□□□□□ -0.1
PHRF1-201ENST00000264555 RAB1CQ92928 201 aa14.42□□□□□ -0.1
PHRF1-201ENST00000264555 MISP3Q96FF7 219 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms