RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 FAM157CP0CG43 387 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 PVALBP20472 110 aaPredicted RBP10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 CEACAM8P31997 349 aaPredicted RBP10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 NKX2-1P43699 371 aaPredicted RBP10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 CEBPDP49716 269 aaPredicted RBP10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 SMIM21Q3B7S5 101 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 ALKBH2Q6NS38 261 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 UQCC3Q6UW78 93 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 ABHD14BQ96IU4 210 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 AKR1E2Q96JD6 320 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 SMIM3Q9BZL3 60 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 LPAR3Q9UBY5 353 aa10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 RBM7Q9Y580 266 aaKnown RBP10.91□□□□□ -0.66
SPTLC1-201ENST00000262554 CLEC18AA5D8T8 446 aa10.9□□□□□ -0.66
SPTLC1-201ENST00000262554 NUDT19A8MXV4 375 aa10.9□□□□□ -0.66
SPTLC1-201ENST00000262554 PSPNO60542 156 aa10.9□□□□□ -0.66
SPTLC1-201ENST00000262554 CRYAAP02489 173 aa10.9□□□□□ -0.66
SPTLC1-201ENST00000262554 SERPINE2P07093 398 aa10.9□□□□□ -0.66
SPTLC1-201ENST00000262554 WNT2P09544 360 aa10.9□□□□□ -0.66
SPTLC1-201ENST00000262554 M6PRP20645 277 aa10.9□□□□□ -0.66
SPTLC1-201ENST00000262554 TESK1Q15569 626 aa10.9□□□□□ -0.66
SPTLC1-201ENST00000262554 SLC35E4Q6ICL7 350 aa10.9□□□□□ -0.66
SPTLC1-201ENST00000262554 UBAC2Q8NBM4 344 aa10.9□□□□□ -0.66
SPTLC1-201ENST00000262554 CLEC18CQ8NCF0 446 aa10.9□□□□□ -0.66
SPTLC1-201ENST00000262554 SUN5Q8TC36 379 aa10.9□□□□□ -0.66
SPTLC1-201ENST00000262554 ARL11Q969Q4 196 aa10.9□□□□□ -0.66
SPTLC1-201ENST00000262554 SAT2Q96F10 170 aaPredicted RBP10.9□□□□□ -0.66
SPTLC1-201ENST00000262554 TMA7Q9Y2S6 64 aaKnown RBP10.9□□□□□ -0.66
SPTLC1-201ENST00000262554 ARID1AO14497 2285 aa10.9□□□□□ -0.66
SPTLC1-201ENST00000262554 FRYQ5TBA9 3013 aa10.9□□□□□ -0.67
SPTLC1-201ENST00000262554 IFNL4K9M1U5 179 aa10.89□□□□□ -0.67
SPTLC1-201ENST00000262554 HEXAP06865 529 aa10.89□□□□□ -0.67
SPTLC1-201ENST00000262554 CEACAM6P40199 344 aa10.89□□□□□ -0.67
SPTLC1-201ENST00000262554 NMSQ5H8A3 153 aa10.89□□□□□ -0.67
SPTLC1-201ENST00000262554 DMBX1Q8NFW5 382 aa10.89□□□□□ -0.67
SPTLC1-201ENST00000262554 OR2Z1Q8NG97 314 aa10.89□□□□□ -0.67
SPTLC1-201ENST00000262554 OR51H1Q8NH63 302 aa10.89□□□□□ -0.67
SPTLC1-201ENST00000262554 ERGIC1Q969X5 290 aa10.89□□□□□ -0.67
SPTLC1-201ENST00000262554 ABHD17AQ96GS6 310 aa10.89□□□□□ -0.67
SPTLC1-201ENST00000262554 DUSP13Q9UII6 198 aa10.89□□□□□ -0.67
SPTLC1-201ENST00000262554 KCNS2Q9ULS6 477 aa10.89□□□□□ -0.67
SPTLC1-201ENST00000262554 PRR14LQ5THK1 2151 aa10.89□□□□□ -0.67
SPTLC1-201ENST00000262554 OOEPA6NGQ2 149 aa10.89□□□□□ -0.67
SPTLC1-201ENST00000262554 ZSCAN5BA6NJL1 495 aa10.89□□□□□ -0.67
SPTLC1-201ENST00000262554 FOXC1Q12948 553 aa10.89□□□□□ -0.67
SPTLC1-201ENST00000262554 STPG2Q8N412 459 aa10.89□□□□□ -0.67
SPTLC1-201ENST00000262554 BOLLQ8N9W6 283 aaKnown RBP10.89□□□□□ -0.67
SPTLC1-201ENST00000262554 BPIFCQ8NFQ6 507 aa10.89□□□□□ -0.67
SPTLC1-201ENST00000262554 UBALD1Q8TB05 177 aa10.89□□□□□ -0.67
SPTLC1-201ENST00000262554 GALMQ96C23 342 aa10.89□□□□□ -0.67
SPTLC1-201ENST00000262554 ZDHHC8Q9ULC8 765 aa10.89□□□□□ -0.67
SPTLC1-201ENST00000262554 FBXO24O75426 580 aa10.88□□□□□ -0.67
SPTLC1-201ENST00000262554 PTBP3O95758 552 aaKnown RBP10.88□□□□□ -0.67
SPTLC1-201ENST00000262554 GLRXP35754 106 aa10.88□□□□□ -0.67
SPTLC1-201ENST00000262554 CD200P41217 278 aa10.88□□□□□ -0.67
SPTLC1-201ENST00000262554 SULT1A2P50226 295 aa10.88□□□□□ -0.67
SPTLC1-201ENST00000262554 KLF3P57682 345 aaPredicted RBP10.88□□□□□ -0.67
SPTLC1-201ENST00000262554 VAMP2P63027 116 aa10.88□□□□□ -0.67
SPTLC1-201ENST00000262554 C1QTNF12Q5T7M4 302 aa10.88□□□□□ -0.67
SPTLC1-201ENST00000262554 CLEC9AQ6UXN8 241 aa10.88□□□□□ -0.67
SPTLC1-201ENST00000262554 OR2C3Q8N628 320 aa10.88□□□□□ -0.67
SPTLC1-201ENST00000262554 LRRC29Q8WV35 223 aa10.88□□□□□ -0.67
SPTLC1-201ENST00000262554 SMIM8Q96KF7 97 aa10.88□□□□□ -0.67
SPTLC1-201ENST00000262554 MMP26Q9NRE1 261 aa10.88□□□□□ -0.67
SPTLC1-201ENST00000262554 PPP1R3CQ9UQK1 317 aa10.88□□□□□ -0.67
SPTLC1-201ENST00000262554 TP53TG5Q9Y2B4 290 aa10.88□□□□□ -0.67
SPTLC1-201ENST00000262554 CHD3Q12873 2000 aaKnown RBP10.88□□□□□ -0.67
SPTLC1-201ENST00000262554 B8ZZF3 427 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 SSSCA1O60232 199 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 MED6O75586 246 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 IGLV2-14P01704 120 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 IGHV3-13P01766 116 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 OR8U9P0C7N5 309 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 PSG2P11465 335 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 SLC25A6P12236 298 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 MMP9P14780 707 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 IL2RGP31785 369 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 OR3A1P47881 315 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 POLR2GP62487 172 aaKnown RBP eCLIP10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 BLOC1S1P78537 153 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 COL10A1Q03692 680 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 AESQ08117 197 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 IL34Q6ZMJ4 242 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 OR8U1Q8NH10 309 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 RNASE11Q8TAA1 199 aaKnown RBP10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 BSCL2Q96G97 398 aaPredicted RBP10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 NARS2Q96I59 477 aaKnown RBP10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 SLC25A31Q9H0C2 315 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 ARV1Q9H2C2 271 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 C11orf1Q9H5F2 150 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 PLEKHF2Q9H8W4 249 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 LIN7CQ9NUP9 197 aaKnown RBP10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 MUC6Q6W4X9 2439 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 RNF212BA8MTL3 300 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 C12orf77C9JDV5 145 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 PRRG2O14669 202 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 GABRA2P47869 451 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 CAV2P51636 162 aa10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 RPS23P62266 143 aaKnown RBP10.87□□□□□ -0.67
SPTLC1-201ENST00000262554 EWSR1Q01844 656 aaKnown RBP eCLIP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms