RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 C10orf113Q5VZT2 155 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 RBPMS2Q6ZRY4 209 aaKnown RBP16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 PRSS27Q9BQR3 290 aa16.26■□□□□ 0.19
SMARCC1-201ENST00000254480 PRF1P14222 555 aa16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 COL8A1P27658 744 aa16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 ZFP36L2P47974 494 aaKnown RBP16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 BSXQ3C1V8 233 aa16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 FOCADQ5VW36 1801 aa16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 TRBV23-1A0A0A0MS06 115 aa16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 EIF3GO75821 320 aaKnown RBP eCLIP16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 ATP6V1FQ16864 119 aa16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 SLC25A42Q86VD7 318 aa16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 ABCA3Q99758 1704 aa16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 C4orf51C9J302 202 aa16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 M0R2Z0 102 aa16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 PLA2G10O15496 165 aa16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 NAT2P11245 290 aa16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 RPL29P47914 159 aaKnown RBP16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 RSPO4Q2I0M5 234 aaPredicted RBP16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 C19orf48Q6RUI8 117 aa16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 DYNLRB2Q8TF09 96 aa16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 TMEM74BQ9NUR3 256 aa16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 SEMA7AO75326 666 aa16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 FGF11Q92914 225 aa16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 J3QR06 171 aa16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 PLAUP00749 431 aa16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 KCNMB2Q9Y691 235 aa16.25■□□□□ 0.19
SMARCC1-201ENST00000254480 Q8WTZ3 238 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 OR51B2Q9Y5P1 312 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 PTP4A3O75365 173 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 RAG2P55895 527 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 RANP62826 216 aaKnown RBP16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 TMEM116Q8NCL8 245 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 OR2D3Q8NGH3 330 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 RAB33BQ9H082 229 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 RGS13O14921 159 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 GPR6P46095 362 aaPredicted RBP16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 UCP2P55851 309 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 B2MP61769 119 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 KLF9Q13886 244 aaPredicted RBP16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 SLC16A13Q7RTY0 426 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 LEAP2Q969E1 77 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 ZNF764Q96H86 408 aaPredicted RBP16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 MS4A7Q9GZW8 240 aaPredicted RBP16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 MFNGO00587 321 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 P01737 135 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 DLK1P80370 383 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 NPAS1Q99742 590 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 MDKP21741 143 aaPredicted RBP16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 ZNF79Q15937 498 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 FDX2Q6P4F2 183 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 GTF2H5Q6ZYL4 71 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 OVCH2Q7RTZ1 564 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 PARP11Q9NR21 331 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 ANKRD31Q8N7Z5 1873 aa16.24■□□□□ 0.19
SMARCC1-201ENST00000254480 RBM11P57052 281 aaKnown RBP16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 MUC15Q8N387 334 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 OR1L6Q8NGR2 347 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 FAM216AQ8WUB2 273 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 ITLN1Q8WWA0 313 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 RUNX1Q01196 453 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 HCP5Q6MZN7 132 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 BVESQ8NE79 360 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 SRSF10O75494 262 aaKnown RBP16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 NPY1RP25929 384 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 CD1BP29016 333 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 SLC35B1P78383 322 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 TMEM97Q5BJF2 176 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 OR10G8Q8NGN5 311 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 ZFC3H1O60293 1989 aaKnown RBP16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 PLXNB2O15031 1838 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 CTDSPLO15194 276 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 F12P00748 615 aaPredicted RBP16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 LTBP4Q8N2S1 1624 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 SCTP09683 121 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 SULT1A1P50225 295 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 TMEM167BQ9NRX6 74 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 PIPOXQ9P0Z9 390 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 NAT8Q9UHE5 227 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 CASP8AP2Q9UKL3 1982 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 USP54Q70EL1 1684 aa16.23■□□□□ 0.19
SMARCC1-201ENST00000254480 CKAP5Q14008 2032 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 SNCGO76070 127 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 FUT5Q11128 374 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 IQCJQ1A5X6 159 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 OR4C5Q8NGB2 326 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 ZNF519Q8TB69 540 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 C1RLQ9NZP8 487 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 DUXBA0A1W2PPF3 345 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 ASAH2BP0C7U1 165 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 LGALSLQ3ZCW2 172 aaPredicted RBP16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 TMEM255AQ5JRV8 349 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 TEX30Q5JUR7 227 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 PRNTQ86SH4 94 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 LDLRAD3Q86YD5 345 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 SNX22Q96L94 193 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 HMSDA8MTL9 139 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 SIGLEC5O15389 551 aa16.22■□□□□ 0.19
SMARCC1-201ENST00000254480 ZNF253O75346 499 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms