RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 GABARAPH6UMI1 98 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 CTDSPLO15194 276 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 GPR37O15354 613 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 FOXH1O75593 365 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 HEXAP06865 529 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 CGB3P0DN86 165 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 CGB7P0DN87 165 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 DLX6P56179 175 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 PITPNAQ00169 270 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 ZNF45Q02386 682 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 LTC4SQ16873 150 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 Q8N402 240 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 C11orf42Q8N5U0 333 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 OR1L1Q8NH94 360 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 C1orf159Q96HA4 380 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 OCSTAMPQ9BR26 566 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 TAF9BQ9HBM6 251 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 LINC00312Q9Y6C7 94 aa13.66□□□□□ -0.22
CCNA1-203ENST00000625767 TRGV10A0A0A0MS01 117 aa13.65□□□□□ -0.22
CCNA1-203ENST00000625767 TRBV23-1A0A0A0MS06 115 aa13.65□□□□□ -0.22
CCNA1-203ENST00000625767 IGHV2-70DA0A0C4DH43 119 aa13.65□□□□□ -0.22
CCNA1-203ENST00000625767 hADV38S2A0JD32 116 aa13.65□□□□□ -0.22
CCNA1-203ENST00000625767 MSMBP08118 114 aa13.65□□□□□ -0.22
CCNA1-203ENST00000625767 GSTT2P0CG29 244 aa13.65□□□□□ -0.22
CCNA1-203ENST00000625767 GSTT2BP0CG30 244 aa13.65□□□□□ -0.22
CCNA1-203ENST00000625767 DTYMKP23919 212 aa13.65□□□□□ -0.22
CCNA1-203ENST00000625767 ARF6P62330 175 aa13.65□□□□□ -0.22
CCNA1-203ENST00000625767 MEF2CQ06413 473 aaPredicted RBP13.65□□□□□ -0.22
CCNA1-203ENST00000625767 FCAMRQ8WWV6 532 aa13.65□□□□□ -0.22
CCNA1-203ENST00000625767 TRIM63Q969Q1 353 aa13.65□□□□□ -0.22
CCNA1-203ENST00000625767 CALYQ9NYX4 217 aa13.65□□□□□ -0.22
CCNA1-203ENST00000625767 OR6C3Q9NZP0 311 aa13.65□□□□□ -0.22
CCNA1-203ENST00000625767 ONECUT1Q9UBC0 465 aa13.65□□□□□ -0.22
CCNA1-203ENST00000625767 IGKV1-6A0A0C4DH72 117 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 FUOMA2VDF0 154 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 FAM172BPA6NC97 362 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 ORC5O43913 435 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 HBZP02008 142 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 HERPUD1Q15011 391 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 CR1LQ2VPA4 569 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 IGSF11Q5DX21 431 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 PRAMEF5Q5TYX0 476 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 HOGA1Q86XE5 327 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 LYSMD2Q8IV50 215 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 Q8N7P7 452 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 BEST4Q8NFU0 473 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 S100ZQ8WXG8 99 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 CORO2AQ92828 525 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 ARL11Q969Q4 196 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 KIRREL1Q96J84 757 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 ZNF714Q96N38 554 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 TSC22D3Q99576 134 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 RIMS4Q9H426 269 aaPredicted RBP13.64□□□□□ -0.23
CCNA1-203ENST00000625767 SCPEP1Q9HB40 452 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 IFT46Q9NQC8 304 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 MTFP1Q9UDX5 166 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 ANAPC10Q9UM13 185 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 POLR3KQ9Y2Y1 108 aaPredicted RBP13.64□□□□□ -0.23
CCNA1-203ENST00000625767 MAST4O15021 2626 aa13.64□□□□□ -0.23
CCNA1-203ENST00000625767 IGHV3-43A0A0B4J1X8 118 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 B4DSR2 109 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 GSTZ1O43708 216 aaPredicted RBP13.63□□□□□ -0.23
CCNA1-203ENST00000625767 TPPPO94811 219 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 ECDO95905 644 aaPredicted RBP13.63□□□□□ -0.23
CCNA1-203ENST00000625767 IGHV3-7P01780 117 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 LIPFP07098 398 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 ZNF728P0DKX0 622 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 IGHV3-43DP0DP04 118 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 ZNF16P17020 682 aaPredicted RBP13.63□□□□□ -0.23
CCNA1-203ENST00000625767 PTBP1P26599 531 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCNA1-203ENST00000625767 HLA-DMAP28067 261 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 HLA-DRB3P79483 266 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 HMGN3Q15651 99 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 CD276Q5ZPR3 534 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 ZNF782Q6ZMW2 699 aaPredicted RBP13.63□□□□□ -0.23
CCNA1-203ENST00000625767 ZNF565Q8N9K5 539 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 THAP7Q9BT49 309 aaPredicted RBP13.63□□□□□ -0.23
CCNA1-203ENST00000625767 NCOR1P1Q9H4R4 102 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 UBE2J1Q9Y385 318 aaPredicted RBP13.63□□□□□ -0.23
CCNA1-203ENST00000625767 RBMX2Q9Y388 322 aaKnown RBP13.63□□□□□ -0.23
CCNA1-203ENST00000625767 KIR2DS1A0A191URI9 304 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 KBTBD11-OT1A0A1B0GTJ5 212 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 SULT1C2O00338 296 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 ENSAO43768 121 aaKnown RBP13.63□□□□□ -0.23
CCNA1-203ENST00000625767 GNMTQ14749 295 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 ZNF846Q147U1 533 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 LINC01356Q8N9X3 169 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 IL1F10Q8WWZ1 152 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 COX4I2Q96KJ9 171 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 HIF1ANQ9NWT6 349 aa13.63□□□□□ -0.23
CCNA1-203ENST00000625767 TRDCB7Z8K6 153 aa13.62□□□□□ -0.23
CCNA1-203ENST00000625767 RBBP9O75884 186 aa13.62□□□□□ -0.23
CCNA1-203ENST00000625767 PPP5CP53041 499 aa13.62□□□□□ -0.23
CCNA1-203ENST00000625767 MRPS10P82664 201 aaKnown RBP13.62□□□□□ -0.23
CCNA1-203ENST00000625767 KRTAP1-1Q07627 177 aa13.62□□□□□ -0.23
CCNA1-203ENST00000625767 FAAP20Q6NZ36 180 aa13.62□□□□□ -0.23
CCNA1-203ENST00000625767 MOB1BQ7L9L4 216 aa13.62□□□□□ -0.23
CCNA1-203ENST00000625767 GDPD1Q8N9F7 314 aa13.62□□□□□ -0.23
CCNA1-203ENST00000625767 OR4D10Q8NGI6 311 aa13.62□□□□□ -0.23
CCNA1-203ENST00000625767 C15orf40Q8WUR7 153 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms