RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 SRRQ9GZT4 340 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 TMEM138Q9NPI0 162 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 SLC17A5Q9NRA2 495 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 ZNF275Q9NSD4 429 aaPredicted RBP3.9□□□□□ -1.79
VPS29-212ENST00000621131 TAS2R4Q9NYW5 299 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 CTSZQ9UBR2 303 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 CLEC4AQ9UMR7 237 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 WIPI2Q9Y4P8 454 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 LIPGQ9Y5X9 500 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 V9GYH0 126 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 CCDC168Q8NDH2 2452 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 MED13Q9UHV7 2174 aa3.9□□□□□ -1.79
VPS29-212ENST00000621131 JMJD1CQ15652 2540 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 A0A0A6YYH2 397 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 A0A1B0GTH9 108 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 LOC390937A0A1W2PQ73 354 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 CIB4A0PJX0 185 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 NAP1L6A6NFF2 107 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 A6NJ64 397 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 H3BSH0 61 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 CTDSPLO15194 276 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 DHRS3O75911 302 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 PNPP00491 289 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 TTRP02766 147 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 SERPINA5P05154 406 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 EIF4EP06730 217 aaKnown RBP3.89□□□□□ -1.79
VPS29-212ENST00000621131 HOXD4P09016 255 aaPredicted RBP3.89□□□□□ -1.79
VPS29-212ENST00000621131 ACSM4P0C7M7 580 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 COX5BP10606 129 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 CD79AP11912 226 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 ABOP16442 354 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 ZNF32P17041 273 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 RPL35AP18077 110 aaKnown RBP3.89□□□□□ -1.79
VPS29-212ENST00000621131 ATF1P18846 271 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 ELK1P19419 428 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 KLK2P20151 261 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 CCL1P22362 96 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 PRKACBP22694 351 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 AGTR1P30556 359 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 APLNRP35414 380 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 DDOSTP39656 456 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 OR3A2P47893 321 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 ACTBP60709 375 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 ACTG1P63261 375 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 HIST1H3AP68431 136 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 RBPJQ06330 500 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 RIPPLY1Q0D2K3 151 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 ARL6IP1Q15041 203 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 OXA1LQ15070 435 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 C3AR1Q16581 482 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 TBC1D28Q2M2D7 210 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 KRTAP13-3Q3SY46 172 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 CCDC92Q53HC0 331 aaPredicted RBP3.89□□□□□ -1.79
VPS29-212ENST00000621131 PHYHD1Q5SRE7 291 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 HIST2H3PS2Q5TEC6 136 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 TSPO2Q5TGU0 170 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 RSBN1Q5VWQ0 802 aaPredicted RBP3.89□□□□□ -1.79
VPS29-212ENST00000621131 OTPQ5XKR4 325 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 FBXW9Q5XUX1 488 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 RAB12Q6IQ22 244 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 PLET1Q6UQ28 207 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 HIST2H3AQ71DI3 136 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 ZNF101Q8IZC7 436 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 RDH10Q8IZV5 341 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.89□□□□□ -1.79
VPS29-212ENST00000621131 OR4M1Q8NGD0 313 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 OR5L1Q8NGL2 311 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 OR6K3Q8NGY3 331 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 SYNPRQ8TBG9 265 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 DEDD2Q8WXF8 326 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 FAM46BQ96A09 425 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 PTX4Q96A99 478 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 FAM3DQ96BQ1 224 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 FGGYQ96C11 551 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 ZFP3Q96NJ6 502 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 OR2H1Q9GZK4 316 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 CST11Q9H112 138 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 ATG5Q9H1Y0 275 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 ABCG5Q9H222 651 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 MIXL1Q9H2W2 232 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 METTL17Q9H7H0 456 aaPredicted RBP3.89□□□□□ -1.79
VPS29-212ENST00000621131 FAIMQ9NVQ4 179 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 RHBDL2Q9NX52 303 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 TAS2R8Q9NYW2 309 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 COPZ2Q9P299 210 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 EIF3KQ9UBQ5 218 aaKnown RBP3.89□□□□□ -1.79
VPS29-212ENST00000621131 KCNN3Q9UGI6 736 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 SLC7A11Q9UPY5 501 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 MRPS7Q9Y2R9 242 aaKnown RBP3.89□□□□□ -1.79
VPS29-212ENST00000621131 PRRC2CQ9Y520 2896 aaKnown RBP3.89□□□□□ -1.79
VPS29-212ENST00000621131 NCKAP5O14513 1909 aa3.89□□□□□ -1.79
VPS29-212ENST00000621131 TRAV8-7A0A075B6U6 113 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 A0A0G2JMP0 313 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 A0A0X1KG70 313 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 LINC00854A0A1B0GVQ3 168 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 FAM240BA0A1B0GVZ2 78 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 A0A1W2PPQ1 181 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 GABARAPH6UMI1 98 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 PIN1P1O15428 100 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 EEF1E1O43324 174 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 243.6 ms