RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 PAX5Q02548 391 aa7.9□□□□□ -1.14
VPS25-205ENST00000590339 ANKRD55Q3KP44 614 aa7.9□□□□□ -1.14
VPS25-205ENST00000590339 LGALSLQ3ZCW2 172 aaPredicted RBP7.9□□□□□ -1.14
VPS25-205ENST00000590339 PAN3Q58A45 887 aaKnown RBP7.9□□□□□ -1.14
VPS25-205ENST00000590339 TMEM108Q6UXF1 575 aa7.9□□□□□ -1.14
VPS25-205ENST00000590339 C20orf204Q6ZNR8 217 aa7.9□□□□□ -1.14
VPS25-205ENST00000590339 FAM90A1Q86YD7 464 aa7.9□□□□□ -1.14
VPS25-205ENST00000590339 TGIF2LYQ8IUE0 185 aa7.9□□□□□ -1.14
VPS25-205ENST00000590339 OR4A4PQ8NGN8 299 aa7.9□□□□□ -1.14
VPS25-205ENST00000590339 NEK7Q8TDX7 302 aa7.9□□□□□ -1.14
VPS25-205ENST00000590339 CASTOR1Q8WTX7 329 aa7.9□□□□□ -1.14
VPS25-205ENST00000590339 RDH5Q92781 318 aa7.9□□□□□ -1.14
VPS25-205ENST00000590339 MRPL24Q96A35 216 aaKnown RBP7.9□□□□□ -1.14
VPS25-205ENST00000590339 PLPPR2Q96GM1 343 aa7.9□□□□□ -1.14
VPS25-205ENST00000590339 MEGF10Q96KG7 1140 aa7.9□□□□□ -1.14
VPS25-205ENST00000590339 RSRP1Q9BUV0 290 aa7.9□□□□□ -1.14
VPS25-205ENST00000590339 MRPL37Q9BZE1 423 aaKnown RBP7.9□□□□□ -1.14
VPS25-205ENST00000590339 TMEM165Q9HC07 324 aa7.9□□□□□ -1.14
VPS25-205ENST00000590339 RAB18Q9NP72 206 aa7.9□□□□□ -1.14
VPS25-205ENST00000590339 MBNL3Q9NUK0 354 aaKnown RBP7.9□□□□□ -1.14
VPS25-205ENST00000590339 PRRC2AP48634 2157 aaKnown RBP7.9□□□□□ -1.15
VPS25-205ENST00000590339 DPRXA6NFQ7 191 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 A6NLC8 198 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 RFPL4AA6NLU0 287 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 RFPL4AL1F8VTS6 287 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 H7C1Q1 480 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 IFNL4K9M1U5 179 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 CCSO14618 274 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 HS3ST1O14792 307 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 SH2D1BO14796 132 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 PLAUP00749 431 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 PPYP01298 95 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 ADH4P08319 380 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 SCTP09683 121 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 CTXN2P0C2S0 81 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 EGR1P18146 543 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 RND3P61587 244 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 SNRPD2P62316 118 aaKnown RBP7.89□□□□□ -1.15
VPS25-205ENST00000590339 SLC9A3R2Q15599 337 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 HMGN3Q15651 99 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 SMIM21Q3B7S5 101 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 IGSF11Q5DX21 431 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 BEX5Q5H9J7 111 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 LIN54Q6MZP7 749 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 C11orf88Q6PI97 169 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 SLC38A6Q8IZM9 456 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 UXS1Q8NBZ7 420 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 WFDC11Q8NEX6 87 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 OR2Z1Q8NG97 314 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 COQ8AQ8NI60 647 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 LRRC29Q8WV35 223 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 MBD6Q96DN6 1003 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 ELMOD3Q96FG2 381 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 GALNT14Q96FL9 552 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 SYT3Q9BQG1 590 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 NAA60Q9H7X0 242 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 HEXA-AS1Q9H8Q6 139 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 C1orf123Q9NWV4 160 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 RASL12Q9NYN1 266 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 WIPI2Q9Y4P8 454 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 OTOGQ6ZRI0 2925 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 TANC2Q9HCD6 1990 aa7.89□□□□□ -1.15
VPS25-205ENST00000590339 TRBV6-7A0A0A0MS04 114 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 IGHV3-64DA0A0J9YX35 117 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 PSPNO60542 156 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 SNAPC5O75971 98 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 ZNF205O95201 554 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 SLC25A4P12235 298 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 CXCL2P19875 107 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 NFYAP23511 347 aaPredicted RBP7.88□□□□□ -1.15
VPS25-205ENST00000590339 LOXP28300 417 aaPredicted RBP7.88□□□□□ -1.15
VPS25-205ENST00000590339 OR3A1P47881 315 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 CEBPDP49716 269 aaPredicted RBP7.88□□□□□ -1.15
VPS25-205ENST00000590339 HERV-K104P61576 105 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 BSPH1Q075Z2 132 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 SPRNQ5BIV9 151 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 SLC35E4Q6ICL7 350 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 C5orf24Q7Z6I8 188 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 LDLRAD3Q86YD5 345 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 SGPP2Q8IWX5 399 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 H1FOOQ8IZA3 346 aaPredicted RBP7.88□□□□□ -1.15
VPS25-205ENST00000590339 FAM185AQ8N0U4 392 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 GCSAMQ8N6F7 178 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 LRTM2Q8N967 370 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 Q8TCH9 128 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 TOMM40LQ969M1 308 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 PERPQ96FX8 193 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 OR2V2Q96R30 315 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 CCL19Q99731 98 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 TMUB1Q9BVT8 246 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 NMES1Q9C002 83 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 GSX1Q9H4S2 264 aaPredicted RBP7.88□□□□□ -1.15
VPS25-205ENST00000590339 SLC2A9Q9NRM0 540 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 UFSP2Q9NUQ7 469 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 TAAR3PQ9P1P4 343 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 DUSP13Q9UII6 198 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 PCDHB10Q9UN67 800 aa7.88□□□□□ -1.15
VPS25-205ENST00000590339 IGKV1D-13A0A0B4J2D9 117 aa7.87□□□□□ -1.15
VPS25-205ENST00000590339 TMEM30CPA0ZSE6 113 aa7.87□□□□□ -1.15
VPS25-205ENST00000590339 ABCD4O14678 606 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms