RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 XPNPEP2O43895 674 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 GATBO75879 557 aaKnown RBP3.17□□□□□ -1.9
DDX42-211ENST00000580108 TSPAN9O75954 239 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 KDM4BO94953 1096 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 TOMM40O96008 361 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 RPSAP08865 295 aaKnown RBP3.17□□□□□ -1.9
DDX42-211ENST00000580108 GNAO1P09471 354 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 UBCP0CG48 685 aaKnown RBP3.17□□□□□ -1.9
DDX42-211ENST00000580108 TMEM225BP0DP42 221 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 ZNF44P15621 663 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 CDK2P24941 298 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 NFYBP25208 207 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 GABRA5P31644 462 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 GLP1RP43220 463 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 OR3A4PP47883 348 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 ATP1B3P54709 279 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 P2RX3P56373 397 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 BPIFB3P59826 476 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 ACTA2P62736 377 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 BLCAPP62952 87 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 ACTG2P63267 376 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 ACTC1P68032 377 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 ACTA1P68133 377 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 ACSM1Q08AH1 577 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 TMED1Q13445 227 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 BLMHQ13867 455 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 DIAPH2-AS1Q14236 149 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 INSL4Q14641 139 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 CDK5R1Q15078 307 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 C17orf58Q2M2W7 97 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 PIGYQ3MUY2 71 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 C4orf46Q504U0 113 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 KHDC1LQ5JSQ8 128 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 TMEM244Q5VVB8 128 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 ZFP1Q6P2D0 407 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 GDPGP1Q6ZNW5 385 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 C9orf47Q6ZRZ4 202 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 GDPD3Q7L5L3 318 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 TRAPPC6BQ86SZ2 158 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 OR5D13Q8NGL4 314 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 OR4P4Q8NGL7 312 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 OR13A1Q8NGR1 328 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 RFESDQ8TAC1 157 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 NDNFQ8TB73 568 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 TSEN15Q8WW01 171 aaKnown RBP3.17□□□□□ -1.9
DDX42-211ENST00000580108 CYGBQ8WWM9 190 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 SNX22Q96L94 193 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 ZNF714Q96N38 554 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 C9orf16Q9BUW7 83 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 DPCDQ9BVM2 203 aaPredicted RBP3.17□□□□□ -1.9
DDX42-211ENST00000580108 FAM192AQ9GZU8 254 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 MMP28Q9H239 520 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 C16orf95Q9H693 158 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 HEXA-AS1Q9H8Q6 139 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 HMG20AQ9NP66 347 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 EXOSC4Q9NPD3 245 aaKnown RBP3.17□□□□□ -1.9
DDX42-211ENST00000580108 ENOPH1Q9UHY7 261 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 KIF25Q9UIL4 384 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.17□□□□□ -1.9
DDX42-211ENST00000580108 HHLA2Q9UM44 414 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 TCF19Q9Y242 345 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 POLDIP2Q9Y2S7 368 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 ORC6Q9Y5N6 252 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 SESN1Q9Y6P5 492 aa3.17□□□□□ -1.9
DDX42-211ENST00000580108 PRKDCP78527 4128 aaKnown RBP3.16□□□□□ -1.9
DDX42-211ENST00000580108 TRAV8-7A0A075B6U6 113 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 IGHV3-43A0A0B4J1X8 118 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 IGHV3-72A0A0B4J1Y9 119 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 A0A1B0GUS0 222 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 ODAMA1E959 279 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 H0YJX3 145 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 EBAG9O00559 213 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 SULT1B1O43704 296 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 SERPINA3P01011 423 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 ISG15P05161 165 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 CSF1P09603 554 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 IGHV3-43DP0DP04 118 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 PRKACBP22694 351 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 TGFBR2P37173 567 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 GNG10P50151 68 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 CCR9P51686 369 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 ADARB1P78563 741 aaKnown RBP3.16□□□□□ -1.9
DDX42-211ENST00000580108 SLC34A1Q06495 639 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 RBM39Q14498 530 aaKnown RBP3.16□□□□□ -1.9
DDX42-211ENST00000580108 HNF4GQ14541 408 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 ZNF146Q15072 292 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 RCN1Q15293 331 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 KISS1Q15726 138 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 PDLIM3Q53GG5 364 aaPredicted RBP3.16□□□□□ -1.9
DDX42-211ENST00000580108 PAN3Q58A45 887 aaKnown RBP3.16□□□□□ -1.9
DDX42-211ENST00000580108 TCTEX1D4Q5JR98 221 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 KRBOX4Q5JUW0 171 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 SLC25A30Q5SVS4 291 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 FAM27D1Q5T7N8 215 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 ZNF691Q5VV52 312 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 MEDAGQ5VYS4 303 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 C18orf65Q6ZTR6 163 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 AHSA2Q719I0 299 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 UTS2BQ765I0 119 aa3.16□□□□□ -1.9
DDX42-211ENST00000580108 DNAAF1Q8NEP3 725 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms